RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ELOBQ15370 118 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 C2orf82Q6UX34 121 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 CASC2Q6XLA1 102 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 LINC00304Q8N9R0 145 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 Q8TAT8 98 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 PSMF1Q92530 271 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 TVP23CQ96ET8 276 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 Q96M85 177 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 TAS2R8Q9NYW2 309 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 NBASA2RRP1 2371 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 SPTBN1Q01082 2364 aaKnown RBP1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 COL4A1P02462 1669 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 AKAP13Q12802 2813 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 RGPD2P0DJD1 1756 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 CELSR1Q9NYQ6 3014 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 PSME4Q14997 1843 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 FOCADQ5VW36 1801 aa1.8□□□□□ -2.12
HERPUD1-211ENST00000566550 MYH13Q9UKX3 1938 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 SCN3AQ9NY46 2000 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 HEATR5BQ9P2D3 2071 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 ASXL3Q9C0F0 2248 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 AHCTF1Q8WYP5 2266 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 PDZD2O15018 2839 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 S100A8P05109 93 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 BRS3P32247 399 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 MIR22HGQ0VDD5 57 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 LINC01545Q5VT33 79 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 LINC00269Q8N2A0 174 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 C5orf17Q8NAS9 161 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 COPS9Q8WXC6 57 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 AGPAT4-IT1Q9H0P7 198 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 MPC1Q9Y5U8 109 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 KTN1Q86UP2 1357 aaKnown RBP1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 LOC285556D6RIA3 1793 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 NCKAP5O14513 1909 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 CCDC88CQ9P219 2028 aa1.79□□□□□ -2.12
HERPUD1-211ENST00000566550 RYR1P21817 5038 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 CSMD1Q96PZ7 3565 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 SDK2Q58EX2 2172 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 KIAA1549Q9HCM3 1950 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 MYH1P12882 1939 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 EDC4Q6P2E9 1401 aaKnown RBP1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 TRGV4A0A0C4DH28 118 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 TMEM218A2RU14 115 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 A6NN06 94 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 H3BRN7 92 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 M0R2P5 195 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 PITX3O75364 302 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 HYPMO75409 117 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 KLF7O75840 302 aaPredicted RBP1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 SNCGO76070 127 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 IGLV3-19P01714 112 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 CXCL8P10145 99 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 RNASE2P10153 161 aaKnown RBP1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 CATR1Q13166 79 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 IGFBP7Q16270 282 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 TPRXLQ17RH7 258 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 MRPL54Q6P161 138 aaKnown RBP1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 TEX261Q6UWH6 196 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 ATP11AUNQ6ZP68 121 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 Q8N2B8 174 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 SNRNP25Q9BV90 132 aaKnown RBP1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 NIPBLQ6KC79 2804 aaeCLIP1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 TLN2Q9Y4G6 2542 aa1.78□□□□□ -2.12
HERPUD1-211ENST00000566550 CACNA1EQ15878 2313 aa1.78□□□□□ -2.13
HERPUD1-211ENST00000566550 KMT2CQ8NEZ4 4911 aaKnown RBP1.78□□□□□ -2.13
HERPUD1-211ENST00000566550 MPDZO75970 2070 aa1.78□□□□□ -2.13
HERPUD1-211ENST00000566550 PATJQ8NI35 1801 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 DOCK2Q92608 1830 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 HYDINQ4G0P3 5121 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 CSMD2Q7Z408 3487 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 RTTNQ86VV8 2226 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 TRAV17A0A0B4J275 112 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 J3QLW9 94 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 CCL25O15444 150 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 IL5P05113 134 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 Q1T7F1 81 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 FOXI2Q6ZQN5 318 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 ZCCHC23Q6ZST2 131 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 C8orf59Q8N0T1 100 aaPredicted RBP1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 ATP6V0E2Q8NHE4 81 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 ZNF431Q8TF32 576 aaPredicted RBP1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 MRPL57Q9BQC6 102 aaKnown RBP1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 NAA60Q9H7X0 242 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 ZFP30Q9Y2G7 519 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 HIVEP1P15822 2718 aa1.77□□□□□ -2.13
HERPUD1-211ENST00000566550 EPPK1P58107 5090 aaKnown RBP1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 MYH9P35579 1960 aaKnown RBP1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 HELZP42694 1942 aaKnown RBP1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 CELSR2Q9HCU4 2923 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 ZNF236Q9UL36 1845 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 CSPG4Q6UVK1 2322 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 A0A087WSZ3 146 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 TRBV6-8A0A0A6YYG3 113 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 IFITM5A6NNB3 132 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 F8W1H4 67 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 M0R143 59 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 IGKV1-17P01599 117 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 P0C880 135 aa1.76□□□□□ -2.13
HERPUD1-211ENST00000566550 Q56UQ5 140 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms