RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 OXTP01178 125 aa8.6□□□□□ -1.03
HACD3-208ENST00000566239 CTRLP40313 264 aa8.6□□□□□ -1.03
HACD3-208ENST00000566239 TWIST1Q15672 202 aa8.6□□□□□ -1.03
HACD3-208ENST00000566239 TCTE3Q8IZS6 198 aa8.6□□□□□ -1.03
HACD3-208ENST00000566239 RPP21Q9H633 154 aaKnown RBP8.6□□□□□ -1.03
HACD3-208ENST00000566239 AP5S1Q9NUS5 200 aa8.6□□□□□ -1.03
HACD3-208ENST00000566239 IGLV4-60A0A075B6I1 120 aa8.59□□□□□ -1.03
HACD3-208ENST00000566239 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.59□□□□□ -1.03
HACD3-208ENST00000566239 CNBPP62633 177 aaKnown RBP8.59□□□□□ -1.03
HACD3-208ENST00000566239 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
HACD3-208ENST00000566239 SDIM1Q6ZPB5 146 aa8.58□□□□□ -1.04
HACD3-208ENST00000566239 SMIM15Q7Z3B0 74 aa8.58□□□□□ -1.04
HACD3-208ENST00000566239 CNFNQ9BYD5 112 aa8.58□□□□□ -1.04
HACD3-208ENST00000566239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.58□□□□□ -1.04
HACD3-208ENST00000566239 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
HACD3-208ENST00000566239 OCC1Q8TAD7 63 aa8.57□□□□□ -1.04
HACD3-208ENST00000566239 RNASE7Q9H1E1 156 aaKnown RBP8.57□□□□□ -1.04
HACD3-208ENST00000566239 AMMECR1LQ6DCA0 310 aa8.56□□□□□ -1.04
HACD3-208ENST00000566239 TEX261Q6UWH6 196 aa8.56□□□□□ -1.04
HACD3-208ENST00000566239 GATD1Q8NB37 220 aa8.56□□□□□ -1.04
HACD3-208ENST00000566239 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
HACD3-208ENST00000566239 GFRA4Q9GZZ7 299 aa8.56□□□□□ -1.04
HACD3-208ENST00000566239 TRAV26-2A0A0B4J265 109 aa8.55□□□□□ -1.04
HACD3-208ENST00000566239 K7EN84 100 aa8.55□□□□□ -1.04
HACD3-208ENST00000566239 NCR2O95944 276 aa8.55□□□□□ -1.04
HACD3-208ENST00000566239 CFAP161Q6P656 301 aa8.55□□□□□ -1.04
HACD3-208ENST00000566239 IGKV3OR2-268A0A0C4DH90 116 aa8.54□□□□□ -1.04
HACD3-208ENST00000566239 TMEM250H0YL14 139 aa8.54□□□□□ -1.04
HACD3-208ENST00000566239 H7C423 109 aa8.54□□□□□ -1.04
HACD3-208ENST00000566239 PANO1I0J062 215 aa8.54□□□□□ -1.04
HACD3-208ENST00000566239 GATCO43716 136 aaKnown RBP8.54□□□□□ -1.04
HACD3-208ENST00000566239 BLOC1S1P78537 153 aa8.54□□□□□ -1.04
HACD3-208ENST00000566239 CIRBPQ14011 172 aaKnown RBP8.54□□□□□ -1.04
HACD3-208ENST00000566239 GAGE12HA6NDE8 117 aa8.53□□□□□ -1.04
HACD3-208ENST00000566239 A8MWL6 223 aa8.53□□□□□ -1.04
HACD3-208ENST00000566239 APCSP02743 223 aa8.53□□□□□ -1.04
HACD3-208ENST00000566239 RNASEKQ6P5S7 137 aaKnown RBP8.53□□□□□ -1.04
HACD3-208ENST00000566239 GTSF1Q8WW33 167 aa8.53□□□□□ -1.04
HACD3-208ENST00000566239 BORCS7Q96B45 105 aa8.53□□□□□ -1.04
HACD3-208ENST00000566239 RPL39LQ96EH5 51 aaKnown RBP8.53□□□□□ -1.04
HACD3-208ENST00000566239 RNF185Q96GF1 192 aa8.53□□□□□ -1.04
HACD3-208ENST00000566239 FAM231DQ6ZW35 169 aa8.52□□□□□ -1.05
HACD3-208ENST00000566239 SDHAF1A6NFY7 115 aa8.51□□□□□ -1.05
HACD3-208ENST00000566239 PMCHP20382 165 aa8.51□□□□□ -1.05
HACD3-208ENST00000566239 Q6ZNX1 250 aa8.51□□□□□ -1.05
HACD3-208ENST00000566239 AKAP14Q86UN6 197 aa8.51□□□□□ -1.05
HACD3-208ENST00000566239 C15orf56Q8N910 161 aa8.51□□□□□ -1.05
HACD3-208ENST00000566239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.5□□□□□ -1.05
HACD3-208ENST00000566239 A0A087WYN8 130 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 IGKV2-29A2NJV5 120 aaPredicted RBP8.5□□□□□ -1.05
HACD3-208ENST00000566239 I3L3M4 83 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 SLPIP03973 132 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 FGF6P10767 208 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
HACD3-208ENST00000566239 RPS10P46783 165 aaKnown RBP8.5□□□□□ -1.05
HACD3-208ENST00000566239 HNRNPA3P51991 378 aaKnown RBP8.5□□□□□ -1.05
HACD3-208ENST00000566239 CEBPGP53567 150 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 FOXA3P55318 350 aaPredicted RBP8.5□□□□□ -1.05
HACD3-208ENST00000566239 CT83Q5H943 113 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 ALKAL2Q6UX46 152 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 SPACA4Q8TDM5 124 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
HACD3-208ENST00000566239 TMEM101Q96IK0 257 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 BTF3L4Q96K17 158 aa8.5□□□□□ -1.05
HACD3-208ENST00000566239 CHTF8P0CG12 524 aa8.49□□□□□ -1.05
HACD3-208ENST00000566239 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
HACD3-208ENST00000566239 FAM210AQ96ND0 272 aa8.49□□□□□ -1.05
HACD3-208ENST00000566239 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
HACD3-208ENST00000566239 COX6A2Q02221 97 aa8.48□□□□□ -1.05
HACD3-208ENST00000566239 Q6ZRU5 148 aa8.48□□□□□ -1.05
HACD3-208ENST00000566239 OR5A1Q8NGJ0 315 aa8.48□□□□□ -1.05
HACD3-208ENST00000566239 LYPD6BQ8NI32 183 aa8.48□□□□□ -1.05
HACD3-208ENST00000566239 C7orf33Q8WU49 177 aa8.48□□□□□ -1.05
HACD3-208ENST00000566239 EIF5A2Q9GZV4 153 aaKnown RBP8.48□□□□□ -1.05
HACD3-208ENST00000566239 ST20Q9HBF5 79 aa8.48□□□□□ -1.05
HACD3-208ENST00000566239 PLA2G2DQ9UNK4 145 aa8.48□□□□□ -1.05
HACD3-208ENST00000566239 GVQW2A0A096LPI5 108 aaPredicted RBP8.47□□□□□ -1.05
HACD3-208ENST00000566239 A0A1B0GUT8 65 aa8.47□□□□□ -1.05
HACD3-208ENST00000566239 NDUFS6O75380 124 aaKnown RBP8.47□□□□□ -1.05
HACD3-208ENST00000566239 MRAP2Q96G30 205 aa8.47□□□□□ -1.05
HACD3-208ENST00000566239 SMIM7Q9BQ49 75 aa8.47□□□□□ -1.05
HACD3-208ENST00000566239 PLAC8Q9NZF1 115 aa8.47□□□□□ -1.05
HACD3-208ENST00000566239 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.05
HACD3-208ENST00000566239 TSKUQ8WUA8 353 aa8.46□□□□□ -1.06
HACD3-208ENST00000566239 TMEM191AQ9H0A3 160 aa8.46□□□□□ -1.06
HACD3-208ENST00000566239 PKIGQ9Y2B9 76 aa8.46□□□□□ -1.06
HACD3-208ENST00000566239 IGKV2-24A0A0C4DH68 120 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 ZNF727A8MUV8 499 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 HIGD1CA8MV81 97 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 TSHBP01222 138 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 ESDP10768 282 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 XCL1P47992 114 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 FOXI1Q12951 378 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 SS18Q15532 418 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 MAJINQ3KP22 176 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 LINC01551Q86U37 167 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 TMEM242Q9NWH2 141 aa8.45□□□□□ -1.06
HACD3-208ENST00000566239 hCG_2014768A0A024R1R8 64 aa8.44□□□□□ -1.06
HACD3-208ENST00000566239 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms