RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 LINC01620Q4KN68 170 aa9.81□□□□□ -0.84
CMTM3-212ENST00000566121 TEX261Q6UWH6 196 aa9.81□□□□□ -0.84
CMTM3-212ENST00000566121 TPPP3Q9BW30 176 aa9.81□□□□□ -0.84
CMTM3-212ENST00000566121 SSTP61278 116 aa9.8□□□□□ -0.84
CMTM3-212ENST00000566121 BLOC1S1P78537 153 aa9.8□□□□□ -0.84
CMTM3-212ENST00000566121 FAM231DQ6ZW35 169 aa9.8□□□□□ -0.84
CMTM3-212ENST00000566121 OCC1Q8TAD7 63 aa9.8□□□□□ -0.84
CMTM3-212ENST00000566121 RPP21Q9H633 154 aaKnown RBP9.8□□□□□ -0.84
CMTM3-212ENST00000566121 H7C423 109 aa9.79□□□□□ -0.84
CMTM3-212ENST00000566121 NCR2O95944 276 aa9.79□□□□□ -0.84
CMTM3-212ENST00000566121 OXTP01178 125 aa9.79□□□□□ -0.84
CMTM3-212ENST00000566121 MGPP08493 103 aa9.79□□□□□ -0.84
CMTM3-212ENST00000566121 NKX2-5P52952 324 aaPredicted RBP9.79□□□□□ -0.84
CMTM3-212ENST00000566121 CIRBPQ14011 172 aaKnown RBP9.79□□□□□ -0.84
CMTM3-212ENST00000566121 SDIM1Q6ZPB5 146 aa9.79□□□□□ -0.84
CMTM3-212ENST00000566121 HMCN2Q8NDA2 5059 aa9.79□□□□□ -0.84
CMTM3-212ENST00000566121 J3QL48 77 aa9.78□□□□□ -0.84
CMTM3-212ENST00000566121 K7EN84 100 aa9.78□□□□□ -0.84
CMTM3-212ENST00000566121 COTL1Q14019 142 aa9.78□□□□□ -0.84
CMTM3-212ENST00000566121 CT83Q5H943 113 aa9.78□□□□□ -0.84
CMTM3-212ENST00000566121 AKAP14Q86UN6 197 aa9.78□□□□□ -0.84
CMTM3-212ENST00000566121 HLA-DQA1P01909 254 aa9.77□□□□□ -0.85
CMTM3-212ENST00000566121 TWIST1Q15672 202 aa9.77□□□□□ -0.85
CMTM3-212ENST00000566121 GATD1Q8NB37 220 aa9.77□□□□□ -0.85
CMTM3-212ENST00000566121 IGLV4-60A0A075B6I1 120 aa9.76□□□□□ -0.85
CMTM3-212ENST00000566121 FAM231BA6NCW3 169 aa9.76□□□□□ -0.85
CMTM3-212ENST00000566121 A8MWL6 223 aa9.76□□□□□ -0.85
CMTM3-212ENST00000566121 GTSF1Q8WW33 167 aa9.76□□□□□ -0.85
CMTM3-212ENST00000566121 RNF185Q96GF1 192 aa9.76□□□□□ -0.85
CMTM3-212ENST00000566121 TRBV6-5A0A0K0K1A5 114 aa9.75□□□□□ -0.85
CMTM3-212ENST00000566121 SMIM15Q7Z3B0 74 aa9.75□□□□□ -0.85
CMTM3-212ENST00000566121 RNASE7Q9H1E1 156 aaKnown RBP9.75□□□□□ -0.85
CMTM3-212ENST00000566121 UBE2L6O14933 153 aa9.74□□□□□ -0.85
CMTM3-212ENST00000566121 AMTP48728 403 aa9.74□□□□□ -0.85
CMTM3-212ENST00000566121 CFAP161Q6P656 301 aa9.74□□□□□ -0.85
CMTM3-212ENST00000566121 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.73□□□□□ -0.85
CMTM3-212ENST00000566121 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
CMTM3-212ENST00000566121 GATCO43716 136 aaKnown RBP9.72□□□□□ -0.85
CMTM3-212ENST00000566121 ZNF25P17030 456 aaPredicted RBP9.72□□□□□ -0.85
CMTM3-212ENST00000566121 AP5S1Q9NUS5 200 aa9.72□□□□□ -0.85
CMTM3-212ENST00000566121 SERTAD4-AS1Q5TG53 156 aa9.71□□□□□ -0.86
CMTM3-212ENST00000566121 CLPSL2Q6UWE3 100 aa9.71□□□□□ -0.86
CMTM3-212ENST00000566121 IGLV10-54A0A075B6I4 117 aa9.7□□□□□ -0.86
CMTM3-212ENST00000566121 IGHV3-64A0A075B6Q5 118 aa9.7□□□□□ -0.86
CMTM3-212ENST00000566121 hDV102S1A0JD36 115 aa9.7□□□□□ -0.86
CMTM3-212ENST00000566121 SDHAF1A6NFY7 115 aa9.7□□□□□ -0.86
CMTM3-212ENST00000566121 SLPIP03973 132 aa9.7□□□□□ -0.86
CMTM3-212ENST00000566121 TMEM191AQ9H0A3 160 aa9.7□□□□□ -0.86
CMTM3-212ENST00000566121 OSTCQ9NRP0 149 aa9.7□□□□□ -0.86
CMTM3-212ENST00000566121 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.7□□□□□ -0.86
CMTM3-212ENST00000566121 I3L3M4 83 aa9.69□□□□□ -0.86
CMTM3-212ENST00000566121 ESDP10768 282 aa9.69□□□□□ -0.86
CMTM3-212ENST00000566121 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
CMTM3-212ENST00000566121 TSKUQ8WUA8 353 aa9.69□□□□□ -0.86
CMTM3-212ENST00000566121 TRAV26-2A0A0B4J265 109 aa9.68□□□□□ -0.86
CMTM3-212ENST00000566121 APCSP02743 223 aa9.68□□□□□ -0.86
CMTM3-212ENST00000566121 POLR2KP53803 58 aaKnown RBP9.68□□□□□ -0.86
CMTM3-212ENST00000566121 ALKAL2Q6UX46 152 aa9.68□□□□□ -0.86
CMTM3-212ENST00000566121 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
CMTM3-212ENST00000566121 GVQW2A0A096LPI5 108 aaPredicted RBP9.67□□□□□ -0.86
CMTM3-212ENST00000566121 TRBV27A0A0K0K1C4 114 aa9.67□□□□□ -0.86
CMTM3-212ENST00000566121 A0A1B0GUT8 65 aa9.67□□□□□ -0.86
CMTM3-212ENST00000566121 PANO1I0J062 215 aa9.67□□□□□ -0.86
CMTM3-212ENST00000566121 FGF6P10767 208 aa9.67□□□□□ -0.86
CMTM3-212ENST00000566121 MRPL52Q86TS9 123 aaKnown RBP9.67□□□□□ -0.86
CMTM3-212ENST00000566121 C15orf56Q8N910 161 aa9.67□□□□□ -0.86
CMTM3-212ENST00000566121 RPL39LQ96EH5 51 aaKnown RBP9.67□□□□□ -0.86
CMTM3-212ENST00000566121 PLAC8Q9NZF1 115 aa9.67□□□□□ -0.86
CMTM3-212ENST00000566121 TNXBP22105 4242 aa9.66□□□□□ -0.86
CMTM3-212ENST00000566121 PPP1R17O96001 155 aa9.66□□□□□ -0.86
CMTM3-212ENST00000566121 RPS10P46783 165 aaKnown RBP9.66□□□□□ -0.86
CMTM3-212ENST00000566121 AMMECR1LQ6DCA0 310 aa9.66□□□□□ -0.86
CMTM3-212ENST00000566121 OR5A1Q8NGJ0 315 aa9.66□□□□□ -0.86
CMTM3-212ENST00000566121 SPACA4Q8TDM5 124 aa9.66□□□□□ -0.86
CMTM3-212ENST00000566121 BORCS7Q96B45 105 aa9.66□□□□□ -0.86
CMTM3-212ENST00000566121 MRAP2Q96G30 205 aa9.66□□□□□ -0.86
CMTM3-212ENST00000566121 SMIM7Q9BQ49 75 aa9.66□□□□□ -0.86
CMTM3-212ENST00000566121 GAGE12HA6NDE8 117 aa9.65□□□□□ -0.86
CMTM3-212ENST00000566121 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
CMTM3-212ENST00000566121 CCL25O15444 150 aa9.65□□□□□ -0.86
CMTM3-212ENST00000566121 PMCHP20382 165 aa9.65□□□□□ -0.86
CMTM3-212ENST00000566121 FAM74A3Q4VXF1 159 aa9.65□□□□□ -0.86
CMTM3-212ENST00000566121 Q6ZRU5 148 aa9.65□□□□□ -0.86
CMTM3-212ENST00000566121 CHCHD10Q8WYQ3 142 aaPredicted RBP9.65□□□□□ -0.86
CMTM3-212ENST00000566121 PKIGQ9Y2B9 76 aa9.65□□□□□ -0.86
CMTM3-212ENST00000566121 EIF5A2Q9GZV4 153 aaKnown RBP9.64□□□□□ -0.87
CMTM3-212ENST00000566121 ST20Q9HBF5 79 aa9.64□□□□□ -0.87
CMTM3-212ENST00000566121 CSDC2Q9Y534 153 aaKnown RBP9.64□□□□□ -0.87
CMTM3-212ENST00000566121 TSHBP01222 138 aa9.63□□□□□ -0.87
CMTM3-212ENST00000566121 SRP19P09132 144 aaKnown RBP9.63□□□□□ -0.87
CMTM3-212ENST00000566121 RAB4AP20338 218 aa9.63□□□□□ -0.87
CMTM3-212ENST00000566121 FOXI1Q12951 378 aa9.63□□□□□ -0.87
CMTM3-212ENST00000566121 TMEM101Q96IK0 257 aa9.63□□□□□ -0.87
CMTM3-212ENST00000566121 BTF3L4Q96K17 158 aa9.63□□□□□ -0.87
CMTM3-212ENST00000566121 SMDT1Q9H4I9 107 aa9.63□□□□□ -0.87
CMTM3-212ENST00000566121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
CMTM3-212ENST00000566121 A0A087WYN8 130 aa9.62□□□□□ -0.87
CMTM3-212ENST00000566121 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
CMTM3-212ENST00000566121 ZNF727A8MUV8 499 aa9.62□□□□□ -0.87
CMTM3-212ENST00000566121 VCYO14598 125 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms