RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 PRR15Q8IV56 129 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 Q8N2B8 174 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 LRRC18Q8N456 261 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 FAM216BQ8N7L0 139 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 C12orf29Q8N999 325 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 OR4B1Q8NGF8 309 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 OR9Q1Q8NGQ5 310 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 BRK1Q8WUW1 75 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 PRELID3AQ96N28 172 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 AP1S3Q96PC3 154 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 LXNQ9BS40 222 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 CDC42SE1Q9NRR8 79 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 LRP1Q07954 4544 aaKnown RBP0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 CITO14578 2027 aa0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 SRRM2Q9UQ35 2752 aaKnown RBP0.79□□□□□ -2.28
SUB1P4-201ENST00000566062 MYH7P12883 1935 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 LOC107984640A0A0U1RRK4 108 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 C9orf170A2RU37 121 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 ZNF736B4DX44 427 aaPredicted RBP0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 ERC2-IT1O76042 136 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 RPS3P23396 243 aaKnown RBP eCLIP0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 KRTAP6-3Q3LI67 103 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 CCDC153Q494R4 210 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 C1orf137Q5JT78 98 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 FAM74A1Q5RGS3 127 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 C6orf52Q5T4I8 152 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 OR8I2Q8N0Y5 310 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 Q8N814 137 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 BORCS5Q969J3 196 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 NIT2Q9NQR4 276 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 GSKIPQ9P0R6 139 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 TPRKBQ9Y3C4 175 aa0.78□□□□□ -2.28
SUB1P4-201ENST00000566062 IGKV2-40A0A087WW87 121 aaPredicted RBP0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 A0A096LPI6 279 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 TRAV13-1A0A0B4J241 112 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 IGHV1-58A0A0C4DH39 117 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 LOC105371267A0A1B0GV96 52 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 F8W1H4 67 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 DEGS1O15121 323 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 ARPC5O15511 151 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 IGKV2D-40P01614 121 aaPredicted RBP0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 IGLV1-51P01701 117 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 CXCL8P10145 99 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 SCGB1A1P11684 91 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 RNASE3P12724 160 aaKnown RBP0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 CCL4P13236 92 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 TPT1P13693 172 aaKnown RBP0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 FABP4P15090 132 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 CRYGSP22914 178 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 SDC4P31431 198 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 ASIPP42127 132 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 ROMO1P60602 79 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 TFF3Q07654 80 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 PDE6HQ13956 83 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 ALX1Q15699 326 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 TMEM14EPQ6UXP3 125 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 ARPINQ7Z6K5 226 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 TMEM229BQ8NBD8 167 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 OR51A4Q8NGJ6 313 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 OR5AK2Q8NH90 309 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 Q8TAT8 98 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 ZNF431Q8TF32 576 aaPredicted RBP0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 C4orf3Q8WVX3 66 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 MAFIPQ8WZ33 124 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 HYLS1Q96M11 299 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 OR4C12Q96R67 309 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 TP53RKQ96S44 253 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 TAF9BQ9HBM6 251 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 FKBP11Q9NYL4 201 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 CALML5Q9NZT1 146 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 SNURFQ9Y675 71 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 CCDC171Q6TFL3 1326 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 KMT2DO14686 5537 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 MED12Q93074 2177 aa0.77□□□□□ -2.29
SUB1P4-201ENST00000566062 IGKV3-7A0A075B6H7 116 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 TRAV36DV7A0A075B6V5 113 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 TRBV6-7A0A0A0MS04 114 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 IGKV3D-7A0A0C4DH55 119 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 IGKV3OR2-268A0A0C4DH90 116 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 C3orf85A0A1B0GTC6 90 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 H3BMG7 143 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 H3BRM9 83 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 K7EIL1 84 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 HCRTO43612 131 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 DPM2O94777 84 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 MT-ND4LP03901 98 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 PAEPP09466 180 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 DSCR4P56555 118 aaPredicted RBP0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 ARPC4P59998 168 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 MAXP61244 160 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 PSPHP78330 225 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 SMCO1Q147U7 214 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 TEN1Q86WV5 123 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 TCTE3Q8IZS6 198 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 FDCSPQ8NFU4 85 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 CLEC2BQ92478 149 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 MCEEQ96PE7 176 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 FAM107BQ9H098 131 aa0.76□□□□□ -2.29
SUB1P4-201ENST00000566062 CST11Q9H112 138 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms