RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PLNP26678 52 aa8.94□□□□□ -0.98
SF3B3-206ENST00000565990 NANOS2P60321 138 aaKnown RBP8.94□□□□□ -0.98
SF3B3-206ENST00000565990 SPANXN1Q5VSR9 72 aa8.94□□□□□ -0.98
SF3B3-206ENST00000565990 Q6ZTI0 123 aa8.94□□□□□ -0.98
SF3B3-206ENST00000565990 GTF2H5Q6ZYL4 71 aa8.94□□□□□ -0.98
SF3B3-206ENST00000565990 POM121L12Q8N7R1 296 aa8.94□□□□□ -0.98
SF3B3-206ENST00000565990 DPH3P1Q9H4G8 78 aa8.94□□□□□ -0.98
SF3B3-206ENST00000565990 C9orf118A6NHY6 69 aa8.93□□□□□ -0.98
SF3B3-206ENST00000565990 NXPH4O95158 308 aa8.93□□□□□ -0.98
SF3B3-206ENST00000565990 S100A4P26447 101 aaKnown RBP8.93□□□□□ -0.98
SF3B3-206ENST00000565990 AP1S3Q96PC3 154 aa8.93□□□□□ -0.98
SF3B3-206ENST00000565990 SMIM2Q9BVW6 85 aa8.93□□□□□ -0.98
SF3B3-206ENST00000565990 DNAH7Q8WXX0 4024 aa8.93□□□□□ -0.98
SF3B3-206ENST00000565990 NACAE9PAV3 2078 aa8.92□□□□□ -0.98
SF3B3-206ENST00000565990 SMKR1H3BMG3 65 aa8.92□□□□□ -0.98
SF3B3-206ENST00000565990 DEFB130BP0DP73 79 aa8.92□□□□□ -0.98
SF3B3-206ENST00000565990 DEFB130AP0DP74 79 aa8.92□□□□□ -0.98
SF3B3-206ENST00000565990 MSRB1Q9NZV6 116 aa8.92□□□□□ -0.98
SF3B3-206ENST00000565990 CSMD3Q7Z407 3707 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 A0A087WX48 190 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 GAGE12BA1L429 117 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 H3BVH4 76 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 GAGE7O76087 117 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 PRSS1P07477 247 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 GAGE12FP0CL80 117 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 GAGE12GP0CL81 117 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 GAGE12IP0CL82 117 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 SMIM17P0DL12 118 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 DAD1P61803 113 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 ZNF876PQ49A33 203 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 Q6ZTC4 211 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 OR5A1Q8NGJ0 315 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 HHLA3Q9XRX5 114 aa8.91□□□□□ -0.98
SF3B3-206ENST00000565990 MUC7Q8TAX7 377 aa8.9□□□□□ -0.98
SF3B3-206ENST00000565990 MRPL16Q9NX20 251 aaKnown RBP8.9□□□□□ -0.98
SF3B3-206ENST00000565990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-206ENST00000565990 H7C1H1 209 aa8.89□□□□□ -0.99
SF3B3-206ENST00000565990 RS1O15537 224 aa8.89□□□□□ -0.99
SF3B3-206ENST00000565990 CIDEAO60543 219 aa8.89□□□□□ -0.99
SF3B3-206ENST00000565990 SUMO2P61956 95 aaKnown RBP8.89□□□□□ -0.99
SF3B3-206ENST00000565990 PAPPA-AS1Q5QFB9 102 aa8.89□□□□□ -0.99
SF3B3-206ENST00000565990 PHLDA1Q8WV24 401 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-206ENST00000565990 TOMM6Q96B49 74 aa8.89□□□□□ -0.99
SF3B3-206ENST00000565990 PHLDA3Q9Y5J5 127 aa8.89□□□□□ -0.99
SF3B3-206ENST00000565990 TRGV2A0A075B6R0 118 aa8.88□□□□□ -0.99
SF3B3-206ENST00000565990 DEFB131BA0A096LNP1 70 aa8.88□□□□□ -0.99
SF3B3-206ENST00000565990 TRAV10A0A0B4J240 114 aa8.88□□□□□ -0.99
SF3B3-206ENST00000565990 F8VRH5 84 aa8.88□□□□□ -0.99
SF3B3-206ENST00000565990 ATP5G1P05496 136 aa8.88□□□□□ -0.99
SF3B3-206ENST00000565990 UFSP1Q6NVU6 142 aa8.88□□□□□ -0.99
SF3B3-206ENST00000565990 CEMP1Q6PRD7 247 aaPredicted RBP8.88□□□□□ -0.99
SF3B3-206ENST00000565990 TM2D2Q9BX73 214 aa8.88□□□□□ -0.99
SF3B3-206ENST00000565990 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
SF3B3-206ENST00000565990 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
SF3B3-206ENST00000565990 TRAV4A0A0B4J268 109 aa8.87□□□□□ -0.99
SF3B3-206ENST00000565990 A8MWV9 139 aa8.87□□□□□ -0.99
SF3B3-206ENST00000565990 C3orf84H3BNL1 204 aa8.87□□□□□ -0.99
SF3B3-206ENST00000565990 K7ERU9 68 aa8.87□□□□□ -0.99
SF3B3-206ENST00000565990 NMUP48645 174 aa8.87□□□□□ -0.99
SF3B3-206ENST00000565990 CFAP126Q5VTH2 177 aa8.87□□□□□ -0.99
SF3B3-206ENST00000565990 AMMECR1LQ6DCA0 310 aa8.87□□□□□ -0.99
SF3B3-206ENST00000565990 SYT8Q8NBV8 401 aa8.87□□□□□ -0.99
SF3B3-206ENST00000565990 DYNC2H1Q8NCM8 4307 aaKnown RBP8.86□□□□□ -0.99
SF3B3-206ENST00000565990 GAGE10A6NGK3 116 aa8.86□□□□□ -0.99
SF3B3-206ENST00000565990 K7EP34 96 aa8.86□□□□□ -0.99
SF3B3-206ENST00000565990 CRYGDP07320 174 aa8.86□□□□□ -0.99
SF3B3-206ENST00000565990 SMIM13P0DJ93 91 aa8.86□□□□□ -0.99
SF3B3-206ENST00000565990 FHL2Q14192 279 aa8.86□□□□□ -0.99
SF3B3-206ENST00000565990 ZFP2Q6ZN57 461 aa8.86□□□□□ -0.99
SF3B3-206ENST00000565990 TENM2Q9NT68 2774 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 TRAV8-6A0A0B4J262 113 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 NUPR2A6NF83 97 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 RBX1P62877 108 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 ZC2HC1BQ5TFG8 222 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 ERASQ7Z444 233 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 ZNF479Q96JC4 524 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 CHAC1Q9BUX1 264 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 CST9LQ9H4G1 147 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 JPT2Q9H910 190 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 KIF25-AS1Q9Y6Z4 181 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 STARD9Q9P2P6 4700 aa8.85□□□□□ -0.99
SF3B3-206ENST00000565990 TRBV25-1A0A075B6N4 114 aa8.84□□□□□ -0.99
SF3B3-206ENST00000565990 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -0.99
SF3B3-206ENST00000565990 F5H768 121 aa8.84□□□□□ -0.99
SF3B3-206ENST00000565990 H3BNG1 76 aa8.84□□□□□ -0.99
SF3B3-206ENST00000565990 GATA1P15976 413 aaPredicted RBP8.84□□□□□ -0.99
SF3B3-206ENST00000565990 CASC10Q5T4H9 136 aa8.84□□□□□ -0.99
SF3B3-206ENST00000565990 Q6ZVH6 145 aa8.84□□□□□ -0.99
SF3B3-206ENST00000565990 PCP2Q8IVA1 136 aa8.84□□□□□ -0.99
SF3B3-206ENST00000565990 NEXN-AS1Q8NBZ9 246 aa8.84□□□□□ -0.99
SF3B3-206ENST00000565990 A0A1W2PPM0 123 aa8.83□□□□□ -1
SF3B3-206ENST00000565990 GAS8-AS1O95177 125 aa8.83□□□□□ -1
SF3B3-206ENST00000565990 FABP2P12104 132 aa8.83□□□□□ -1
SF3B3-206ENST00000565990 LINC00315P59091 139 aa8.83□□□□□ -1
SF3B3-206ENST00000565990 OCIAD2Q56VL3 154 aa8.83□□□□□ -1
SF3B3-206ENST00000565990 CEND1Q8N111 149 aa8.83□□□□□ -1
SF3B3-206ENST00000565990 TMEM141Q96I45 108 aa8.83□□□□□ -1
SF3B3-206ENST00000565990 SCGB3A1Q96QR1 104 aa8.83□□□□□ -1
SF3B3-206ENST00000565990 MRPL35Q9NZE8 188 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms