RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 NCR2O95944 276 aa13.13□□□□□ -0.31
CMTM3-211ENST00000565922 KRTAP10-1P60331 282 aa13.13□□□□□ -0.31
CMTM3-211ENST00000565922 RPL39LQ96EH5 51 aaKnown RBP13.13□□□□□ -0.31
CMTM3-211ENST00000565922 PRR34Q9NV39 138 aa13.13□□□□□ -0.31
CMTM3-211ENST00000565922 HSPG2P98160 4391 aa13.13□□□□□ -0.31
CMTM3-211ENST00000565922 WFDC2Q14508 124 aa13.12□□□□□ -0.31
CMTM3-211ENST00000565922 C14orf177Q52M58 125 aa13.12□□□□□ -0.31
CMTM3-211ENST00000565922 NUP35Q8NFH5 326 aa13.12□□□□□ -0.31
CMTM3-211ENST00000565922 APOBP04114 4563 aaKnown RBP13.12□□□□□ -0.31
CMTM3-211ENST00000565922 SDHAF1A6NFY7 115 aa13.11□□□□□ -0.31
CMTM3-211ENST00000565922 Q8N1X5 172 aa13.11□□□□□ -0.31
CMTM3-211ENST00000565922 LINC00269Q8N2A0 174 aa13.11□□□□□ -0.31
CMTM3-211ENST00000565922 MRAP2Q96G30 205 aa13.11□□□□□ -0.31
CMTM3-211ENST00000565922 TRBV6-5A0A0K0K1A5 114 aa13.1□□□□□ -0.31
CMTM3-211ENST00000565922 TMEM70Q9BUB7 260 aa13.1□□□□□ -0.31
CMTM3-211ENST00000565922 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.09□□□□□ -0.31
CMTM3-211ENST00000565922 APCSP02743 223 aa13.09□□□□□ -0.31
CMTM3-211ENST00000565922 REG3AQ06141 175 aa13.09□□□□□ -0.31
CMTM3-211ENST00000565922 CLPSL2Q6UWE3 100 aa13.09□□□□□ -0.31
CMTM3-211ENST00000565922 TRAV8-4A0A0B4J246 113 aa13.08□□□□□ -0.32
CMTM3-211ENST00000565922 A0A1B0GW15 77 aa13.08□□□□□ -0.32
CMTM3-211ENST00000565922 SMIM27A0A1W2PRY6 76 aa13.08□□□□□ -0.32
CMTM3-211ENST00000565922 H7C423 109 aa13.08□□□□□ -0.32
CMTM3-211ENST00000565922 I3L3M4 83 aa13.08□□□□□ -0.32
CMTM3-211ENST00000565922 PPP1R17O96001 155 aa13.08□□□□□ -0.32
CMTM3-211ENST00000565922 HLA-DQA1P01909 254 aa13.08□□□□□ -0.32
CMTM3-211ENST00000565922 C20orf203Q8NBC4 194 aa13.08□□□□□ -0.32
CMTM3-211ENST00000565922 ST20Q9HBF5 79 aa13.08□□□□□ -0.32
CMTM3-211ENST00000565922 RAB4AP20338 218 aa13.07□□□□□ -0.32
CMTM3-211ENST00000565922 PMCHP20382 165 aa13.07□□□□□ -0.32
CMTM3-211ENST00000565922 AMN1Q8IY45 258 aa13.07□□□□□ -0.32
CMTM3-211ENST00000565922 XGP55808 180 aa13.06□□□□□ -0.32
CMTM3-211ENST00000565922 AMMECR1LQ6DCA0 310 aa13.06□□□□□ -0.32
CMTM3-211ENST00000565922 DEFB104AQ8WTQ1 72 aa13.06□□□□□ -0.32
CMTM3-211ENST00000565922 RNF185Q96GF1 192 aa13.06□□□□□ -0.32
CMTM3-211ENST00000565922 IGLV4-60A0A075B6I1 120 aa13.05□□□□□ -0.32
CMTM3-211ENST00000565922 S100A8P05109 93 aa13.05□□□□□ -0.32
CMTM3-211ENST00000565922 PNRC1Q12796 327 aaPredicted RBP13.04□□□□□ -0.32
CMTM3-211ENST00000565922 PPP1R2P9O14990 202 aa13.03□□□□□ -0.32
CMTM3-211ENST00000565922 ZNF25P17030 456 aaPredicted RBP13.03□□□□□ -0.32
CMTM3-211ENST00000565922 USP17L23D6RBM5 183 aa13.02□□□□□ -0.33
CMTM3-211ENST00000565922 CLLU1Q5K131 121 aa13.02□□□□□ -0.33
CMTM3-211ENST00000565922 IGLV10-54A0A075B6I4 117 aa13.01□□□□□ -0.33
CMTM3-211ENST00000565922 TRBV27A0A0K0K1C4 114 aa13.01□□□□□ -0.33
CMTM3-211ENST00000565922 LINC00862A6NCI5 91 aa13.01□□□□□ -0.33
CMTM3-211ENST00000565922 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
CMTM3-211ENST00000565922 CAMPP49913 170 aa13.01□□□□□ -0.33
CMTM3-211ENST00000565922 POLR2KP53803 58 aaKnown RBP13.01□□□□□ -0.33
CMTM3-211ENST00000565922 FAM104BQ5XKR9 115 aa13.01□□□□□ -0.33
CMTM3-211ENST00000565922 RNASEKQ6P5S7 137 aaKnown RBP13.01□□□□□ -0.33
CMTM3-211ENST00000565922 BTF3L4Q96K17 158 aa13.01□□□□□ -0.33
CMTM3-211ENST00000565922 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13□□□□□ -0.33
CMTM3-211ENST00000565922 IGKV2-29A2NJV5 120 aaPredicted RBP13□□□□□ -0.33
CMTM3-211ENST00000565922 EPM2AB3EWF7 344 aa13□□□□□ -0.33
CMTM3-211ENST00000565922 F8W036 122 aa13□□□□□ -0.33
CMTM3-211ENST00000565922 GAS8-AS1O95177 125 aa13□□□□□ -0.33
CMTM3-211ENST00000565922 FGF6P10767 208 aa13□□□□□ -0.33
CMTM3-211ENST00000565922 HBBP68871 147 aa13□□□□□ -0.33
CMTM3-211ENST00000565922 KRTAP26-1Q6PEX3 210 aa13□□□□□ -0.33
CMTM3-211ENST00000565922 TMEM101Q96IK0 257 aa13□□□□□ -0.33
CMTM3-211ENST00000565922 KRTAP4-5Q9BYR2 181 aa13□□□□□ -0.33
CMTM3-211ENST00000565922 TMEM242Q9NWH2 141 aa13□□□□□ -0.33
CMTM3-211ENST00000565922 VCYO14598 125 aa12.99□□□□□ -0.33
CMTM3-211ENST00000565922 TSHBP01222 138 aa12.99□□□□□ -0.33
CMTM3-211ENST00000565922 SUMO2P61956 95 aaKnown RBP12.99□□□□□ -0.33
CMTM3-211ENST00000565922 CLRN3Q8NCR9 226 aa12.99□□□□□ -0.33
CMTM3-211ENST00000565922 SMKR1H3BMG3 65 aa12.98□□□□□ -0.33
CMTM3-211ENST00000565922 ESDP10768 282 aa12.98□□□□□ -0.33
CMTM3-211ENST00000565922 SMAGPQ0VAQ4 97 aa12.98□□□□□ -0.33
CMTM3-211ENST00000565922 MRPL51Q4U2R6 128 aaKnown RBP12.98□□□□□ -0.33
CMTM3-211ENST00000565922 MRPL54Q6P161 138 aaKnown RBP12.98□□□□□ -0.33
CMTM3-211ENST00000565922 ATP5L2Q7Z4Y8 100 aa12.98□□□□□ -0.33
CMTM3-211ENST00000565922 KIR2DL4Q99706 377 aa12.98□□□□□ -0.33
CMTM3-211ENST00000565922 C7orf77A4D0Y5 90 aa12.97□□□□□ -0.33
CMTM3-211ENST00000565922 FCER1GP30273 86 aa12.97□□□□□ -0.33
CMTM3-211ENST00000565922 CKS2P33552 79 aa12.97□□□□□ -0.33
CMTM3-211ENST00000565922 DGAT2L7PQ6IED9 249 aa12.97□□□□□ -0.33
CMTM3-211ENST00000565922 Q6ZSA8 131 aa12.97□□□□□ -0.33
CMTM3-211ENST00000565922 NRACQ8N912 160 aa12.97□□□□□ -0.33
CMTM3-211ENST00000565922 ANAPC16Q96DE5 110 aa12.97□□□□□ -0.33
CMTM3-211ENST00000565922 KRTAP17-1Q9BYP8 105 aa12.97□□□□□ -0.33
CMTM3-211ENST00000565922 MT-ND4LP03901 98 aa12.96□□□□□ -0.33
CMTM3-211ENST00000565922 OR5A1Q8NGJ0 315 aa12.96□□□□□ -0.33
CMTM3-211ENST00000565922 IGKV3OR2-268A0A0C4DH90 116 aa12.95□□□□□ -0.34
CMTM3-211ENST00000565922 A0A1B0GXF2 115 aa12.95□□□□□ -0.34
CMTM3-211ENST00000565922 C20orf78Q9BR46 151 aa12.95□□□□□ -0.34
CMTM3-211ENST00000565922 FAM30AQ9NZY2 134 aa12.95□□□□□ -0.34
CMTM3-211ENST00000565922 TRBV24-1A0A075B6N3 115 aa12.94□□□□□ -0.34
CMTM3-211ENST00000565922 TCAPO15273 167 aa12.94□□□□□ -0.34
CMTM3-211ENST00000565922 PPBPP02775 128 aa12.94□□□□□ -0.34
CMTM3-211ENST00000565922 PRSS1P07477 247 aa12.94□□□□□ -0.34
CMTM3-211ENST00000565922 UQCC3Q6UW78 93 aa12.94□□□□□ -0.34
CMTM3-211ENST00000565922 MRPL52Q86TS9 123 aaKnown RBP12.94□□□□□ -0.34
CMTM3-211ENST00000565922 FAM229AH3BQW9 127 aa12.93□□□□□ -0.34
CMTM3-211ENST00000565922 RPL32P62910 135 aaKnown RBP12.93□□□□□ -0.34
CMTM3-211ENST00000565922 LINC01620Q4KN68 170 aa12.93□□□□□ -0.34
CMTM3-211ENST00000565922 Q5VSD8 79 aa12.93□□□□□ -0.34
CMTM3-211ENST00000565922 TMEM18Q96B42 140 aa12.93□□□□□ -0.34
CMTM3-211ENST00000565922 PCLOQ9Y6V0 5065 aa12.93□□□□□ -0.34
CMTM3-211ENST00000565922 PHOX2AO14813 284 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms