RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 C20orf78Q9BR46 151 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 TMEM243Q9BU79 118 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 TRBV27A0A0K0K1C4 114 aa8.5□□□□□ -1.05
SHCBP1-204ENST00000565887 A0A1B0GUV1 79 aa8.5□□□□□ -1.05
SHCBP1-204ENST00000565887 UBE2L6O14933 153 aa8.5□□□□□ -1.05
SHCBP1-204ENST00000565887 AMTP48728 403 aa8.5□□□□□ -1.05
SHCBP1-204ENST00000565887 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
SHCBP1-204ENST00000565887 COX19Q49B96 90 aa8.5□□□□□ -1.05
SHCBP1-204ENST00000565887 RMI2Q96E14 147 aa8.5□□□□□ -1.05
SHCBP1-204ENST00000565887 TMEM70Q9BUB7 260 aa8.5□□□□□ -1.05
SHCBP1-204ENST00000565887 EREGO14944 169 aa8.49□□□□□ -1.05
SHCBP1-204ENST00000565887 SUMO2P61956 95 aaKnown RBP8.49□□□□□ -1.05
SHCBP1-204ENST00000565887 RPL32P62910 135 aaKnown RBP8.49□□□□□ -1.05
SHCBP1-204ENST00000565887 SMAGPQ0VAQ4 97 aa8.49□□□□□ -1.05
SHCBP1-204ENST00000565887 ORMDL3Q8N138 153 aa8.49□□□□□ -1.05
SHCBP1-204ENST00000565887 KIR2DL4Q99706 377 aa8.49□□□□□ -1.05
SHCBP1-204ENST00000565887 RPS10P5Q9NQ39 176 aa8.49□□□□□ -1.05
SHCBP1-204ENST00000565887 LAMTOR2Q9Y2Q5 125 aa8.49□□□□□ -1.05
SHCBP1-204ENST00000565887 APOC3P02656 99 aa8.48□□□□□ -1.05
SHCBP1-204ENST00000565887 APCSP02743 223 aa8.48□□□□□ -1.05
SHCBP1-204ENST00000565887 ATRAIDQ6UW56 229 aa8.48□□□□□ -1.05
SHCBP1-204ENST00000565887 TMEM136Q6ZRR5 245 aa8.48□□□□□ -1.05
SHCBP1-204ENST00000565887 NRACQ8N912 160 aa8.48□□□□□ -1.05
SHCBP1-204ENST00000565887 KLK12Q9UKR0 248 aa8.48□□□□□ -1.05
SHCBP1-204ENST00000565887 PSCAO43653 123 aa8.47□□□□□ -1.05
SHCBP1-204ENST00000565887 RPS10P46783 165 aaKnown RBP8.47□□□□□ -1.05
SHCBP1-204ENST00000565887 Q6ZRN7 208 aaPredicted RBP8.47□□□□□ -1.05
SHCBP1-204ENST00000565887 D6R8Y8 96 aa8.46□□□□□ -1.06
SHCBP1-204ENST00000565887 TNFRSF6BO95407 300 aa8.46□□□□□ -1.06
SHCBP1-204ENST00000565887 ANGP03950 147 aaKnown RBP8.46□□□□□ -1.06
SHCBP1-204ENST00000565887 FCER1GP30273 86 aa8.46□□□□□ -1.06
SHCBP1-204ENST00000565887 RBX1P62877 108 aa8.46□□□□□ -1.06
SHCBP1-204ENST00000565887 GAGE6Q13070 117 aa8.46□□□□□ -1.06
SHCBP1-204ENST00000565887 SMKR1H3BMG3 65 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 GAS8-AS1O95177 125 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 HLA-DQA1P01909 254 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 CRPP02741 224 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 ZNF25P17030 456 aaPredicted RBP8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 TNP2Q05952 138 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 MIAQ16674 131 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 MPV17L2Q567V2 206 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 AMMECR1LQ6DCA0 310 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 TMEM18Q96B42 140 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 PRELID3AQ96N28 172 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 GNB1LQ9BYB4 327 aa8.45□□□□□ -1.06
SHCBP1-204ENST00000565887 PRSS47A8MTI9 375 aa8.44□□□□□ -1.06
SHCBP1-204ENST00000565887 ESDP10768 282 aa8.44□□□□□ -1.06
SHCBP1-204ENST00000565887 UBE2WQ96B02 151 aa8.44□□□□□ -1.06
SHCBP1-204ENST00000565887 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
SHCBP1-204ENST00000565887 Q9HAA7 133 aa8.44□□□□□ -1.06
SHCBP1-204ENST00000565887 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
SHCBP1-204ENST00000565887 TRAV8-4A0A0B4J246 113 aa8.43□□□□□ -1.06
SHCBP1-204ENST00000565887 TSHBP01222 138 aa8.43□□□□□ -1.06
SHCBP1-204ENST00000565887 MT-ND6P03923 174 aa8.43□□□□□ -1.06
SHCBP1-204ENST00000565887 RAB5AP20339 215 aa8.43□□□□□ -1.06
SHCBP1-204ENST00000565887 Q8N3U1 123 aa8.43□□□□□ -1.06
SHCBP1-204ENST00000565887 Q8N976 141 aa8.43□□□□□ -1.06
SHCBP1-204ENST00000565887 C1orf43Q9BWL3 253 aa8.43□□□□□ -1.06
SHCBP1-204ENST00000565887 A0A1B0GVY2 172 aa8.42□□□□□ -1.06
SHCBP1-204ENST00000565887 K7EMI3 77 aa8.42□□□□□ -1.06
SHCBP1-204ENST00000565887 ENHOQ6UWT2 76 aa8.42□□□□□ -1.06
SHCBP1-204ENST00000565887 LINC00269Q8N2A0 174 aa8.42□□□□□ -1.06
SHCBP1-204ENST00000565887 SMIM2Q9BVW6 85 aa8.42□□□□□ -1.06
SHCBP1-204ENST00000565887 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
SHCBP1-204ENST00000565887 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
SHCBP1-204ENST00000565887 FRAS1Q86XX4 4008 aa8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 IGKV2D-24A0A075B6R9 120 aa8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 NPYP01303 97 aa8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 FGF6P10767 208 aa8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 G0S2P27469 103 aa8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 REG3AQ06141 175 aa8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 RNASEKQ6P5S7 137 aaKnown RBP8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 MRPL52Q86TS9 123 aaKnown RBP8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 CSDC2Q9Y534 153 aaKnown RBP8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 DNAH10Q8IVF4 4471 aa8.41□□□□□ -1.06
SHCBP1-204ENST00000565887 A0A087WTM6 91 aa8.4□□□□□ -1.06
SHCBP1-204ENST00000565887 DGAT2L7PQ6IED9 249 aa8.4□□□□□ -1.06
SHCBP1-204ENST00000565887 SLC7A5P1Q8MH63 180 aa8.4□□□□□ -1.06
SHCBP1-204ENST00000565887 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
SHCBP1-204ENST00000565887 DEFB104AQ8WTQ1 72 aa8.4□□□□□ -1.06
SHCBP1-204ENST00000565887 TIMM21Q9BVV7 248 aa8.4□□□□□ -1.06
SHCBP1-204ENST00000565887 NXT2Q9NPJ8 142 aaKnown RBP8.4□□□□□ -1.06
SHCBP1-204ENST00000565887 IGLV4-60A0A075B6I1 120 aa8.39□□□□□ -1.07
SHCBP1-204ENST00000565887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.39□□□□□ -1.07
SHCBP1-204ENST00000565887 IGKV2-29A2NJV5 120 aaPredicted RBP8.39□□□□□ -1.07
SHCBP1-204ENST00000565887 CDPF1Q6NVV7 123 aa8.39□□□□□ -1.07
SHCBP1-204ENST00000565887 Q8N8P6 123 aa8.39□□□□□ -1.07
SHCBP1-204ENST00000565887 DNAH17Q9UFH2 4485 aa8.38□□□□□ -1.07
SHCBP1-204ENST00000565887 LRCOL1A6NCL2 159 aa8.38□□□□□ -1.07
SHCBP1-204ENST00000565887 CCL25O15444 150 aa8.38□□□□□ -1.07
SHCBP1-204ENST00000565887 C14orf177Q52M58 125 aa8.38□□□□□ -1.07
SHCBP1-204ENST00000565887 SMCO4Q9NRQ5 59 aa8.38□□□□□ -1.07
SHCBP1-204ENST00000565887 DNAH2Q9P225 4427 aa8.37□□□□□ -1.07
SHCBP1-204ENST00000565887 FABP9Q0Z7S8 132 aa8.37□□□□□ -1.07
SHCBP1-204ENST00000565887 ORMDL2Q53FV1 153 aa8.37□□□□□ -1.07
SHCBP1-204ENST00000565887 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
SHCBP1-204ENST00000565887 ZNF664Q8N3J9 261 aa8.37□□□□□ -1.07
SHCBP1-204ENST00000565887 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
SHCBP1-204ENST00000565887 MRPL18Q9H0U6 180 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms