RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 BAGE3Q86Y29 109 aa5.38□□□□□ -1.55
CDH1-208ENST00000565810 C18orf32Q8TCD1 76 aa5.38□□□□□ -1.55
CDH1-208ENST00000565810 TMEM18Q96B42 140 aa5.38□□□□□ -1.55
CDH1-208ENST00000565810 TGP01266 2768 aa5.38□□□□□ -1.55
CDH1-208ENST00000565810 CSMD3Q7Z407 3707 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 TMEM262E9PQX1 116 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 LINC00614P0C842 121 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 SMAGPQ0VAQ4 97 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 Q0VG73 95 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 LAGE3Q14657 143 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 IQCJQ1A5X6 159 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 ORMDL2Q53FV1 153 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 DEFB104AQ8WTQ1 72 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 CHCHD5Q9BSY4 110 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 TMEM243Q9BU79 118 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 MRPS16Q9Y3D3 137 aaKnown RBP5.37□□□□□ -1.55
CDH1-208ENST00000565810 LINC00588Q9Y4M8 146 aa5.37□□□□□ -1.55
CDH1-208ENST00000565810 IGLV2-18A0A075B6J9 118 aa5.36□□□□□ -1.55
CDH1-208ENST00000565810 A0A087WX48 190 aa5.36□□□□□ -1.55
CDH1-208ENST00000565810 TSHBP01222 138 aa5.36□□□□□ -1.55
CDH1-208ENST00000565810 LGALS9CQ6DKI2 356 aa5.36□□□□□ -1.55
CDH1-208ENST00000565810 NTM-AS1Q6ZSK4 140 aa5.36□□□□□ -1.55
CDH1-208ENST00000565810 NIT1Q86X76 327 aa5.36□□□□□ -1.55
CDH1-208ENST00000565810 AP5S1Q9NUS5 200 aa5.36□□□□□ -1.55
CDH1-208ENST00000565810 VPS13DQ5THJ4 4388 aa5.36□□□□□ -1.55
CDH1-208ENST00000565810 NACAE9PAV3 2078 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 H7C423 109 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST1H2BKO60814 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST1H2BJP06899 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 ESDP10768 282 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST1H2BOP23527 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST1H2BBP33778 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST1H2BDP58876 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST1H2BCP62807 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 GAGE6Q13070 117 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST2H2BEQ16778 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.35□□□□□ -1.55
CDH1-208ENST00000565810 AMMECR1LQ6DCA0 310 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 RNASEKQ6P5S7 137 aaKnown RBP5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST1H2BHQ93079 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 CHCHD1Q96BP2 118 aaKnown RBP5.35□□□□□ -1.55
CDH1-208ENST00000565810 LYSTQ99698 3801 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST1H2BNQ99877 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 HIST1H2BMQ99879 126 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 UPK3BQ9BT76 320 aa5.35□□□□□ -1.55
CDH1-208ENST00000565810 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.34□□□□□ -1.55
CDH1-208ENST00000565810 TRAV9-2A0A087WT02 112 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 IGKV2-29A2NJV5 120 aaPredicted RBP5.34□□□□□ -1.55
CDH1-208ENST00000565810 LINC01549A6NIU2 74 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 SIVA1O15304 175 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 HSBP1O75506 76 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 LY6G6CO95867 125 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 BTF3P20290 206 aaKnown RBP5.34□□□□□ -1.55
CDH1-208ENST00000565810 DGAT2L7PQ6IED9 249 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 C20orf203Q8NBC4 194 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 TMEM101Q96IK0 257 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 CHCHD7Q9BUK0 85 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 Q9H8V8 135 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 SACSQ9NZJ4 4579 aa5.34□□□□□ -1.55
CDH1-208ENST00000565810 DNAH1Q9P2D7 4330 aa5.34□□□□□ -1.56
CDH1-208ENST00000565810 LINC01546A6NGU7 62 aa5.33□□□□□ -1.56
CDH1-208ENST00000565810 S100A6P06703 90 aa5.33□□□□□ -1.56
CDH1-208ENST00000565810 ZNF25P17030 456 aaPredicted RBP5.33□□□□□ -1.56
CDH1-208ENST00000565810 NDUFA6P56556 154 aa5.33□□□□□ -1.56
CDH1-208ENST00000565810 WFDC10BQ8IUB3 73 aa5.33□□□□□ -1.56
CDH1-208ENST00000565810 CYSLTR1Q9Y271 337 aa5.33□□□□□ -1.56
CDH1-208ENST00000565810 A0A1B0GUV1 79 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 K7EP13 123 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 SERF1AO75920 110 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 IGHV3-30P01768 117 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 IGHV3-33P01772 117 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 HBDP02042 147 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 DNAH10OSP0CZ25 163 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 IGHV3-30-3P0DP02 117 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 IGHV3-30-5P0DP03 117 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 FGF6P10767 208 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 LINC01556Q5JQF7 62 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 C2orf66Q6UXQ4 117 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 C10orf126Q8N4M7 172 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 OR5A1Q8NGJ0 315 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 LINC00476Q8WZB0 136 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 SPANXA1Q9NS26 97 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 ALMS1Q8TCU4 4167 aa5.32□□□□□ -1.56
CDH1-208ENST00000565810 ANGP03950 147 aaKnown RBP5.31□□□□□ -1.56
CDH1-208ENST00000565810 RBX1P62877 108 aa5.31□□□□□ -1.56
CDH1-208ENST00000565810 RPL39P62891 51 aaKnown RBP5.31□□□□□ -1.56
CDH1-208ENST00000565810 MPV17L2Q567V2 206 aa5.31□□□□□ -1.56
CDH1-208ENST00000565810 TTC32Q5I0X7 151 aa5.31□□□□□ -1.56
CDH1-208ENST00000565810 Q6ZN92 141 aa5.31□□□□□ -1.56
CDH1-208ENST00000565810 MRPL52Q86TS9 123 aaKnown RBP5.31□□□□□ -1.56
CDH1-208ENST00000565810 TOMM6Q96B49 74 aa5.31□□□□□ -1.56
CDH1-208ENST00000565810 URB1-AS1Q96HZ7 61 aa5.31□□□□□ -1.56
CDH1-208ENST00000565810 SCGB3A1Q96QR1 104 aa5.31□□□□□ -1.56
CDH1-208ENST00000565810 TIMM21Q9BVV7 248 aa5.31□□□□□ -1.56
CDH1-208ENST00000565810 UBE2D4Q9Y2X8 147 aa5.31□□□□□ -1.56
CDH1-208ENST00000565810 CSDC2Q9Y534 153 aaKnown RBP5.31□□□□□ -1.56
CDH1-208ENST00000565810 ATP5LO75964 103 aa5.3□□□□□ -1.56
CDH1-208ENST00000565810 CRPP02741 224 aa5.3□□□□□ -1.56
CDH1-208ENST00000565810 PMCHL1Q16048 86 aa5.3□□□□□ -1.56
CDH1-208ENST00000565810 COA6Q5JTJ3 125 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms