RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 DGAT2L7PQ6IED9 249 aa15.23■□□□□ 0.03
RAB40C-209ENST00000565511 SLC51BQ86UW2 128 aa15.23■□□□□ 0.03
RAB40C-209ENST00000565511 PGLYRP4Q96LB8 373 aa15.23■□□□□ 0.03
RAB40C-209ENST00000565511 SDIM1Q6ZPB5 146 aa15.22■□□□□ 0.03
RAB40C-209ENST00000565511 GATD1Q8NB37 220 aa15.22■□□□□ 0.03
RAB40C-209ENST00000565511 CNFNQ9BYD5 112 aa15.22■□□□□ 0.03
RAB40C-209ENST00000565511 A0A1B0GUV1 79 aa15.21■□□□□ 0.03
RAB40C-209ENST00000565511 SLPIP03973 132 aa15.21■□□□□ 0.03
RAB40C-209ENST00000565511 FOXA3P55318 350 aaPredicted RBP15.21■□□□□ 0.03
RAB40C-209ENST00000565511 RPL37AP61513 92 aaKnown RBP15.21■□□□□ 0.03
RAB40C-209ENST00000565511 OCC1Q8TAD7 63 aa15.21■□□□□ 0.03
RAB40C-209ENST00000565511 RPP21Q9H633 154 aaKnown RBP15.21■□□□□ 0.03
RAB40C-209ENST00000565511 WDR73Q6P4I2 378 aa15.2■□□□□ 0.02
RAB40C-209ENST00000565511 GTSF1Q8WW33 167 aa15.2■□□□□ 0.02
RAB40C-209ENST00000565511 AMTP48728 403 aa15.19■□□□□ 0.02
RAB40C-209ENST00000565511 TWIST1Q15672 202 aa15.19■□□□□ 0.02
RAB40C-209ENST00000565511 RPL39LQ96EH5 51 aaKnown RBP15.19■□□□□ 0.02
RAB40C-209ENST00000565511 BIN3Q9NQY0 253 aa15.19■□□□□ 0.02
RAB40C-209ENST00000565511 hDV102S1A0JD36 115 aa15.18■□□□□ 0.02
RAB40C-209ENST00000565511 CNBPP62633 177 aaKnown RBP15.18■□□□□ 0.02
RAB40C-209ENST00000565511 COTL1Q14019 142 aa15.17■□□□□ 0.02
RAB40C-209ENST00000565511 Q6ZNX1 250 aa15.17■□□□□ 0.02
RAB40C-209ENST00000565511 TRAV8-4A0A0B4J246 113 aa15.16■□□□□ 0.02
RAB40C-209ENST00000565511 CLRN3Q8NCR9 226 aa15.16■□□□□ 0.02
RAB40C-209ENST00000565511 CHTF8P0CG12 524 aa15.15■□□□□ 0.02
RAB40C-209ENST00000565511 CIRBPQ14011 172 aaKnown RBP15.15■□□□□ 0.02
RAB40C-209ENST00000565511 C15orf56Q8N910 161 aa15.15■□□□□ 0.02
RAB40C-209ENST00000565511 UBE2L6O14933 153 aa15.14■□□□□ 0.01
RAB40C-209ENST00000565511 OXTP01178 125 aa15.13■□□□□ 0.01
RAB40C-209ENST00000565511 TAGLN2P37802 199 aaKnown RBP15.13■□□□□ 0.01
RAB40C-209ENST00000565511 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.12■□□□□ 0.01
RAB40C-209ENST00000565511 IGKV3OR2-268A0A0C4DH90 116 aa15.12■□□□□ 0.01
RAB40C-209ENST00000565511 IGKV2-29A2NJV5 120 aaPredicted RBP15.12■□□□□ 0.01
RAB40C-209ENST00000565511 GAGE12HA6NDE8 117 aa15.12■□□□□ 0.01
RAB40C-209ENST00000565511 GAS8-AS1O95177 125 aa15.12■□□□□ 0.01
RAB40C-209ENST00000565511 ALKAL2Q6UX46 152 aa15.12■□□□□ 0.01
RAB40C-209ENST00000565511 GATCO43716 136 aaKnown RBP15.09■□□□□ 0.01
RAB40C-209ENST00000565511 IGHV3-64A0A075B6Q5 118 aa15.08■□□□□ 0
RAB40C-209ENST00000565511 TMEM250H0YL14 139 aa15.08■□□□□ 0
RAB40C-209ENST00000565511 SPACA4Q8TDM5 124 aa15.08■□□□□ 0
RAB40C-209ENST00000565511 hCG_2014768A0A024R1R8 64 aa15.07■□□□□ 0
RAB40C-209ENST00000565511 SDHAF1A6NFY7 115 aa15.07■□□□□ 0
RAB40C-209ENST00000565511 HIGD2BQ4VC39 106 aa15.07■□□□□ 0
RAB40C-209ENST00000565511 FAM231DQ6ZW35 169 aa15.07■□□□□ 0
RAB40C-209ENST00000565511 LYPD6BQ8NI32 183 aa15.07■□□□□ 0
RAB40C-209ENST00000565511 A0A087WYN8 130 aa15.06■□□□□ 0
RAB40C-209ENST00000565511 FAM231BA6NCW3 169 aa15.06■□□□□ 0
RAB40C-209ENST00000565511 AKAP14Q86UN6 197 aa15.06■□□□□ 0
RAB40C-209ENST00000565511 CHCHD10Q8WYQ3 142 aaPredicted RBP15.06■□□□□ 0
RAB40C-209ENST00000565511 AP5S1Q9NUS5 200 aa15.06■□□□□ 0
RAB40C-209ENST00000565511 APCSP02743 223 aa15.05■□□□□ -0
RAB40C-209ENST00000565511 FGF6P10767 208 aa15.05■□□□□ -0
RAB40C-209ENST00000565511 CEBPGP53567 150 aa15.05■□□□□ -0
RAB40C-209ENST00000565511 NCR2O95944 276 aa15.04■□□□□ -0
RAB40C-209ENST00000565511 AMMECR1LQ6DCA0 310 aa15.04■□□□□ -0
RAB40C-209ENST00000565511 RNASEKQ6P5S7 137 aaKnown RBP15.04■□□□□ -0
RAB40C-209ENST00000565511 MT1HL1P0DM35 61 aa15.03■□□□□ -0
RAB40C-209ENST00000565511 BLOC1S1P78537 153 aa15.03■□□□□ -0
RAB40C-209ENST00000565511 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.02■□□□□ -0
RAB40C-209ENST00000565511 A8MWL6 223 aa15.02■□□□□ -0
RAB40C-209ENST00000565511 TSHBP01222 138 aa15.02■□□□□ -0
RAB40C-209ENST00000565511 FOXI1Q12951 378 aa15.02■□□□□ -0
RAB40C-209ENST00000565511 SMIM15Q7Z3B0 74 aa15.02■□□□□ -0
RAB40C-209ENST00000565511 TRBV6-5A0A0K0K1A5 114 aa15.01□□□□□ -0.01
RAB40C-209ENST00000565511 RPS10P46783 165 aaKnown RBP15.01□□□□□ -0.01
RAB40C-209ENST00000565511 COX6A2Q02221 97 aa15.01□□□□□ -0.01
RAB40C-209ENST00000565511 CT83Q5H943 113 aa15.01□□□□□ -0.01
RAB40C-209ENST00000565511 SERTAD4-AS1Q5TG53 156 aa15.01□□□□□ -0.01
RAB40C-209ENST00000565511 PRSS3P2Q8NHM4 247 aa15.01□□□□□ -0.01
RAB40C-209ENST00000565511 RNF185Q96GF1 192 aa15.01□□□□□ -0.01
RAB40C-209ENST00000565511 TMEM242Q9NWH2 141 aa15.01□□□□□ -0.01
RAB40C-209ENST00000565511 ESDP10768 282 aa15□□□□□ -0.01
RAB40C-209ENST00000565511 LINC01551Q86U37 167 aa15□□□□□ -0.01
RAB40C-209ENST00000565511 PLAC8Q9NZF1 115 aa15□□□□□ -0.01
RAB40C-209ENST00000565511 GVQW2A0A096LPI5 108 aaPredicted RBP14.99□□□□□ -0.01
RAB40C-209ENST00000565511 H7C423 109 aa14.99□□□□□ -0.01
RAB40C-209ENST00000565511 I3L3M4 83 aa14.99□□□□□ -0.01
RAB40C-209ENST00000565511 TEX261Q6UWH6 196 aa14.99□□□□□ -0.01
RAB40C-209ENST00000565511 UBR4Q5T4S7 5183 aa14.98□□□□□ -0.01
RAB40C-209ENST00000565511 PMCHP20382 165 aa14.98□□□□□ -0.01
RAB40C-209ENST00000565511 CFAP161Q6P656 301 aa14.98□□□□□ -0.01
RAB40C-209ENST00000565511 SMIM7Q9BQ49 75 aa14.98□□□□□ -0.01
RAB40C-209ENST00000565511 TNXBP22105 4242 aa14.98□□□□□ -0.01
RAB40C-209ENST00000565511 HIGD1CA8MV81 97 aa14.97□□□□□ -0.01
RAB40C-209ENST00000565511 OR5A1Q8NGJ0 315 aa14.97□□□□□ -0.01
RAB40C-209ENST00000565511 DPH3Q96FX2 82 aa14.97□□□□□ -0.01
RAB40C-209ENST00000565511 PHOX2AO14813 284 aa14.96□□□□□ -0.01
RAB40C-209ENST00000565511 XCL1P47992 114 aa14.96□□□□□ -0.01
RAB40C-209ENST00000565511 TSKUQ8WUA8 353 aa14.96□□□□□ -0.01
RAB40C-209ENST00000565511 LINC00526Q96FQ7 95 aa14.96□□□□□ -0.01
RAB40C-209ENST00000565511 IGKV2-24A0A0C4DH68 120 aa14.95□□□□□ -0.02
RAB40C-209ENST00000565511 LINC00959A0A1B0GUT2 108 aa14.95□□□□□ -0.02
RAB40C-209ENST00000565511 A0A1B0GUT8 65 aa14.95□□□□□ -0.02
RAB40C-209ENST00000565511 SMKR1H3BMG3 65 aa14.95□□□□□ -0.02
RAB40C-209ENST00000565511 SRP19P09132 144 aaKnown RBP14.95□□□□□ -0.02
RAB40C-209ENST00000565511 POLR2KP53803 58 aaKnown RBP14.95□□□□□ -0.02
RAB40C-209ENST00000565511 AMN1Q8IY45 258 aa14.95□□□□□ -0.02
RAB40C-209ENST00000565511 EIF5A2Q9GZV4 153 aaKnown RBP14.95□□□□□ -0.02
RAB40C-209ENST00000565511 TMEM191AQ9H0A3 160 aa14.95□□□□□ -0.02
RAB40C-209ENST00000565511 ST20Q9HBF5 79 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms