RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 TMEM191AQ9H0A3 160 aa6.64□□□□□ -1.35
CDH1-206ENST00000564676 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
CDH1-206ENST00000564676 IGKV2D-24A0A075B6R9 120 aa6.63□□□□□ -1.35
CDH1-206ENST00000564676 SMIM27A0A1W2PRY6 76 aa6.63□□□□□ -1.35
CDH1-206ENST00000564676 CRPP02741 224 aa6.63□□□□□ -1.35
CDH1-206ENST00000564676 FUSP35637 526 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDH1-206ENST00000564676 IFITM2Q01629 132 aa6.63□□□□□ -1.35
CDH1-206ENST00000564676 Q0VG73 95 aa6.63□□□□□ -1.35
CDH1-206ENST00000564676 AMN1Q8IY45 258 aa6.63□□□□□ -1.35
CDH1-206ENST00000564676 COX11Q9Y6N1 276 aa6.63□□□□□ -1.35
CDH1-206ENST00000564676 LRCOL1A6NCL2 159 aa6.62□□□□□ -1.35
CDH1-206ENST00000564676 UBE2L6O14933 153 aa6.62□□□□□ -1.35
CDH1-206ENST00000564676 RAB4AP20338 218 aa6.62□□□□□ -1.35
CDH1-206ENST00000564676 AMTP48728 403 aa6.62□□□□□ -1.35
CDH1-206ENST00000564676 RBX1P62877 108 aa6.62□□□□□ -1.35
CDH1-206ENST00000564676 CDPF1Q6NVV7 123 aa6.62□□□□□ -1.35
CDH1-206ENST00000564676 Q8N976 141 aa6.62□□□□□ -1.35
CDH1-206ENST00000564676 RNF185Q96GF1 192 aa6.62□□□□□ -1.35
CDH1-206ENST00000564676 HERC2O95714 4834 aa6.62□□□□□ -1.35
CDH1-206ENST00000564676 RYR1P21817 5038 aa6.61□□□□□ -1.35
CDH1-206ENST00000564676 SDHAF1A6NFY7 115 aa6.61□□□□□ -1.35
CDH1-206ENST00000564676 PPP1R2P9O14990 202 aa6.61□□□□□ -1.35
CDH1-206ENST00000564676 PMCHP20382 165 aa6.61□□□□□ -1.35
CDH1-206ENST00000564676 CAMPP49913 170 aa6.61□□□□□ -1.35
CDH1-206ENST00000564676 PNRC1Q12796 327 aaPredicted RBP6.61□□□□□ -1.35
CDH1-206ENST00000564676 MRAP2Q96G30 205 aa6.61□□□□□ -1.35
CDH1-206ENST00000564676 C1orf43Q9BWL3 253 aa6.61□□□□□ -1.35
CDH1-206ENST00000564676 ST20Q9HBF5 79 aa6.61□□□□□ -1.35
CDH1-206ENST00000564676 TRBV6-5A0A0K0K1A5 114 aa6.6□□□□□ -1.35
CDH1-206ENST00000564676 A0A1B0GW15 77 aa6.6□□□□□ -1.35
CDH1-206ENST00000564676 LECT2O14960 151 aa6.6□□□□□ -1.35
CDH1-206ENST00000564676 GAS8-AS1O95177 125 aa6.6□□□□□ -1.35
CDH1-206ENST00000564676 MRPL54Q6P161 138 aaKnown RBP6.6□□□□□ -1.35
CDH1-206ENST00000564676 CLPSL2Q6UWE3 100 aa6.6□□□□□ -1.35
CDH1-206ENST00000564676 ENHOQ6UWT2 76 aa6.6□□□□□ -1.35
CDH1-206ENST00000564676 LINC00269Q8N2A0 174 aa6.6□□□□□ -1.35
CDH1-206ENST00000564676 Q8N814 137 aa6.6□□□□□ -1.35
CDH1-206ENST00000564676 BAALCQ8WXS3 180 aa6.6□□□□□ -1.35
CDH1-206ENST00000564676 IGLV5-52A0A0A0MRZ9 124 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 SMKR1H3BMG3 65 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 I3L3M4 83 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 NCR2O95944 276 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 PPP1R17O96001 155 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 APCSP02743 223 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 MT-ND4LP03901 98 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 S100A8P05109 93 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 RPS10P46783 165 aaKnown RBP6.59□□□□□ -1.35
CDH1-206ENST00000564676 MIAQ16674 131 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 FAM104BQ5XKR9 115 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 UQCC3Q6UW78 93 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 MAPKAPK5-AS1Q8N8E1 139 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 ANAPC16Q96DE5 110 aa6.59□□□□□ -1.35
CDH1-206ENST00000564676 IGLV4-60A0A075B6I1 120 aa6.58□□□□□ -1.36
CDH1-206ENST00000564676 A0A1B0GUV1 79 aa6.58□□□□□ -1.36
CDH1-206ENST00000564676 F8W036 122 aa6.58□□□□□ -1.36
CDH1-206ENST00000564676 GHRHP01286 108 aa6.58□□□□□ -1.36
CDH1-206ENST00000564676 HBBP68871 147 aa6.58□□□□□ -1.36
CDH1-206ENST00000564676 WFDC2Q14508 124 aa6.58□□□□□ -1.36
CDH1-206ENST00000564676 AMMECR1LQ6DCA0 310 aa6.58□□□□□ -1.36
CDH1-206ENST00000564676 C20orf203Q8NBC4 194 aa6.58□□□□□ -1.36
CDH1-206ENST00000564676 NTN5Q8WTR8 489 aaPredicted RBP6.58□□□□□ -1.36
CDH1-206ENST00000564676 TMEM70Q9BUB7 260 aa6.58□□□□□ -1.36
CDH1-206ENST00000564676 TMEM218A2RU14 115 aa6.57□□□□□ -1.36
CDH1-206ENST00000564676 VCYO14598 125 aa6.57□□□□□ -1.36
CDH1-206ENST00000564676 CDK2AP2O75956 126 aa6.57□□□□□ -1.36
CDH1-206ENST00000564676 GCSHP23434 173 aa6.57□□□□□ -1.36
CDH1-206ENST00000564676 CKS2P33552 79 aa6.57□□□□□ -1.36
CDH1-206ENST00000564676 POLR2KP53803 58 aaKnown RBP6.57□□□□□ -1.36
CDH1-206ENST00000564676 REG3AQ06141 175 aa6.57□□□□□ -1.36
CDH1-206ENST00000564676 MRPL51Q4U2R6 128 aaKnown RBP6.57□□□□□ -1.36
CDH1-206ENST00000564676 RNASEKQ6P5S7 137 aaKnown RBP6.57□□□□□ -1.36
CDH1-206ENST00000564676 MRPL18Q9H0U6 180 aaKnown RBP6.57□□□□□ -1.36
CDH1-206ENST00000564676 PRR34Q9NV39 138 aa6.57□□□□□ -1.36
CDH1-206ENST00000564676 TMEM242Q9NWH2 141 aa6.57□□□□□ -1.36
CDH1-206ENST00000564676 APOBP04114 4563 aaKnown RBP6.57□□□□□ -1.36
CDH1-206ENST00000564676 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.56□□□□□ -1.36
CDH1-206ENST00000564676 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.56□□□□□ -1.36
CDH1-206ENST00000564676 A0A1B0GXF2 115 aa6.56□□□□□ -1.36
CDH1-206ENST00000564676 IGKV2-29A2NJV5 120 aaPredicted RBP6.56□□□□□ -1.36
CDH1-206ENST00000564676 LINC00862A6NCI5 91 aa6.56□□□□□ -1.36
CDH1-206ENST00000564676 H7C423 109 aa6.56□□□□□ -1.36
CDH1-206ENST00000564676 HLA-DQA1P01909 254 aa6.56□□□□□ -1.36
CDH1-206ENST00000564676 KRTAP10-1P60331 282 aa6.56□□□□□ -1.36
CDH1-206ENST00000564676 SUMO2P61956 95 aaKnown RBP6.56□□□□□ -1.36
CDH1-206ENST00000564676 ATP5L2Q7Z4Y8 100 aa6.56□□□□□ -1.36
CDH1-206ENST00000564676 COMMD7Q86VX2 200 aa6.56□□□□□ -1.36
CDH1-206ENST00000564676 NRACQ8N912 160 aa6.56□□□□□ -1.36
CDH1-206ENST00000564676 IGLV10-54A0A075B6I4 117 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 TRAV8-4A0A0B4J246 113 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 IGKV3OR2-268A0A0C4DH90 116 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 TRBV27A0A0K0K1C4 114 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 TSHBP01222 138 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 FGF6P10767 208 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 FCER1GP30273 86 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 C14orf177Q52M58 125 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 BTF3L4Q96K17 158 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 KIR2DL4Q99706 377 aa6.55□□□□□ -1.36
CDH1-206ENST00000564676 D6R8Y8 96 aa6.54□□□□□ -1.36
CDH1-206ENST00000564676 ESDP10768 282 aa6.54□□□□□ -1.36
CDH1-206ENST00000564676 ADCYAP1P18509 176 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms