RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 SMAGPQ0VAQ4 97 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 FHL2Q14192 279 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 ODF1Q14990 250 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 ATOH7Q8N100 152 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 Q8NAQ8 132 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 PYGO1Q9Y3Y4 419 aa11.05□□□□□ -0.64
COMMD4-210ENST00000564587 MEGF8Q7Z7M0 2845 aa11.04□□□□□ -0.64
COMMD4-210ENST00000564587 DPM2O94777 84 aa11.04□□□□□ -0.64
COMMD4-210ENST00000564587 SPART-AS1P0CW21 52 aa11.04□□□□□ -0.64
COMMD4-210ENST00000564587 CRYBA4P53673 196 aa11.04□□□□□ -0.64
COMMD4-210ENST00000564587 UBE2D3P61077 147 aa11.04□□□□□ -0.64
COMMD4-210ENST00000564587 UBE2D2P62837 147 aa11.04□□□□□ -0.64
COMMD4-210ENST00000564587 TMEM97Q5BJF2 176 aa11.04□□□□□ -0.64
COMMD4-210ENST00000564587 VWFP04275 2813 aa11.04□□□□□ -0.64
COMMD4-210ENST00000564587 PLNP26678 52 aa11.03□□□□□ -0.64
COMMD4-210ENST00000564587 DDTP30046 118 aa11.03□□□□□ -0.64
COMMD4-210ENST00000564587 BAALCQ8WXS3 180 aa11.03□□□□□ -0.64
COMMD4-210ENST00000564587 F8VRH5 84 aa11.02□□□□□ -0.65
COMMD4-210ENST00000564587 IGKCP01834 107 aa11.02□□□□□ -0.65
COMMD4-210ENST00000564587 DAD1P61803 113 aa11.02□□□□□ -0.65
COMMD4-210ENST00000564587 PMVKQ15126 192 aa11.02□□□□□ -0.65
COMMD4-210ENST00000564587 MIEN1Q9BRT3 115 aa11.02□□□□□ -0.65
COMMD4-210ENST00000564587 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
COMMD4-210ENST00000564587 SPANXA1Q9NS26 97 aa11.02□□□□□ -0.65
COMMD4-210ENST00000564587 HHLA3Q9XRX5 114 aa11.02□□□□□ -0.65
COMMD4-210ENST00000564587 GAGE12JA6NER3 117 aa11.01□□□□□ -0.65
COMMD4-210ENST00000564587 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
COMMD4-210ENST00000564587 GAGE1Q13065 139 aa11.01□□□□□ -0.65
COMMD4-210ENST00000564587 GAGE4Q13068 117 aa11.01□□□□□ -0.65
COMMD4-210ENST00000564587 GAGE5Q13069 117 aa11.01□□□□□ -0.65
COMMD4-210ENST00000564587 GAGE13Q4V321 117 aa11.01□□□□□ -0.65
COMMD4-210ENST00000564587 PHLDA1Q8WV24 401 aaPredicted RBP11.01□□□□□ -0.65
COMMD4-210ENST00000564587 PMCHL2Q9BQD1 86 aa11.01□□□□□ -0.65
COMMD4-210ENST00000564587 UQCR10Q9UDW1 63 aa11.01□□□□□ -0.65
COMMD4-210ENST00000564587 PRO0255Q9UI72 69 aa11.01□□□□□ -0.65
COMMD4-210ENST00000564587 CHTOPQ9Y3Y2 248 aaKnown RBP11.01□□□□□ -0.65
COMMD4-210ENST00000564587 KPRPQ5T749 579 aaPredicted RBP11□□□□□ -0.65
COMMD4-210ENST00000564587 CHCHD7Q9BUK0 85 aa11□□□□□ -0.65
COMMD4-210ENST00000564587 TIMM21Q9BVV7 248 aa11□□□□□ -0.65
COMMD4-210ENST00000564587 Q9UF83 564 aa11□□□□□ -0.65
COMMD4-210ENST00000564587 hDV102S1A0JD36 115 aa10.99□□□□□ -0.65
COMMD4-210ENST00000564587 PRSS29PA6NIE9 313 aa10.99□□□□□ -0.65
COMMD4-210ENST00000564587 ATP5G1P05496 136 aa10.99□□□□□ -0.65
COMMD4-210ENST00000564587 IGLC3P0DOY3 106 aa10.99□□□□□ -0.65
COMMD4-210ENST00000564587 MRPL35Q9NZE8 188 aaKnown RBP10.99□□□□□ -0.65
COMMD4-210ENST00000564587 IGHV3-38A0A0C4DH36 116 aa10.98□□□□□ -0.65
COMMD4-210ENST00000564587 H7C423 109 aa10.98□□□□□ -0.65
COMMD4-210ENST00000564587 MAJINQ3KP22 176 aa10.98□□□□□ -0.65
COMMD4-210ENST00000564587 VCX2Q9H322 139 aa10.98□□□□□ -0.65
COMMD4-210ENST00000564587 C11orf68Q9H3H3 251 aaKnown RBP10.98□□□□□ -0.65
COMMD4-210ENST00000564587 CST9LQ9H4G1 147 aa10.98□□□□□ -0.65
COMMD4-210ENST00000564587 LINC00694P0DN24 101 aa10.97□□□□□ -0.65
COMMD4-210ENST00000564587 DEFB104AQ8WTQ1 72 aa10.97□□□□□ -0.65
COMMD4-210ENST00000564587 IGLV4-3A0A075B6K6 122 aa10.96□□□□□ -0.65
COMMD4-210ENST00000564587 MRPS36P82909 103 aaKnown RBP10.96□□□□□ -0.65
COMMD4-210ENST00000564587 UBE2D4Q9Y2X8 147 aa10.96□□□□□ -0.65
COMMD4-210ENST00000564587 CSDC2Q9Y534 153 aaKnown RBP10.96□□□□□ -0.65
COMMD4-210ENST00000564587 TRBV25-1A0A075B6N4 114 aa10.95□□□□□ -0.66
COMMD4-210ENST00000564587 LINC00587B1AMM8 73 aa10.95□□□□□ -0.66
COMMD4-210ENST00000564587 DEFB4AO15263 64 aa10.95□□□□□ -0.66
COMMD4-210ENST00000564587 PAX4O43316 350 aa10.95□□□□□ -0.66
COMMD4-210ENST00000564587 DEFA6Q01524 100 aa10.95□□□□□ -0.66
COMMD4-210ENST00000564587 DGAT2L7PQ6IED9 249 aa10.95□□□□□ -0.66
COMMD4-210ENST00000564587 MRPL52Q86TS9 123 aaKnown RBP10.95□□□□□ -0.66
COMMD4-210ENST00000564587 TMEM243Q9BU79 118 aa10.95□□□□□ -0.66
COMMD4-210ENST00000564587 TGP01266 2768 aa10.94□□□□□ -0.66
COMMD4-210ENST00000564587 GYPEP15421 78 aa10.94□□□□□ -0.66
COMMD4-210ENST00000564587 SLC25A34Q6PIV7 304 aa10.94□□□□□ -0.66
COMMD4-210ENST00000564587 SH2D6Q7Z4S9 175 aa10.94□□□□□ -0.66
COMMD4-210ENST00000564587 ATP6V0E2Q8NHE4 81 aa10.94□□□□□ -0.66
COMMD4-210ENST00000564587 AMELXQ99217 191 aa10.94□□□□□ -0.66
COMMD4-210ENST00000564587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
COMMD4-210ENST00000564587 LOC100131303A0A0U1RQF7 123 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
COMMD4-210ENST00000564587 UBE2L6O14933 153 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 COX8AP10176 69 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 ZC2HC1BQ5TFG8 222 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 SBSPONQ8IVN8 264 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 C14orf144Q96I85 54 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 SPATA25Q9BR10 227 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 C2orf88Q9BSF0 95 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 CELA1Q9UNI1 258 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 TRRAPQ9Y4A5 3859 aa10.93□□□□□ -0.66
COMMD4-210ENST00000564587 TRAV26-1A0A087WT03 109 aa10.92□□□□□ -0.66
COMMD4-210ENST00000564587 DLEU1O43261 78 aa10.92□□□□□ -0.66
COMMD4-210ENST00000564587 ZNF25P17030 456 aaPredicted RBP10.92□□□□□ -0.66
COMMD4-210ENST00000564587 HNRNPA3P51991 378 aaKnown RBP10.92□□□□□ -0.66
COMMD4-210ENST00000564587 HERVK_113P61574 105 aa10.92□□□□□ -0.66
COMMD4-210ENST00000564587 ANKRD39Q53RE8 183 aa10.92□□□□□ -0.66
COMMD4-210ENST00000564587 NFE4Q86UQ8 179 aa10.92□□□□□ -0.66
COMMD4-210ENST00000564587 STPG4Q8N801 248 aa10.92□□□□□ -0.66
COMMD4-210ENST00000564587 TRBV6-8A0A0A6YYG3 113 aa10.91□□□□□ -0.66
COMMD4-210ENST00000564587 F5H768 121 aa10.91□□□□□ -0.66
COMMD4-210ENST00000564587 TMEM101Q96IK0 257 aa10.91□□□□□ -0.66
COMMD4-210ENST00000564587 MRPS16Q9Y3D3 137 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms