RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 DNAH10Q8IVF4 4471 aa11.29□□□□□ -0.6
RNF40-206ENST00000564260 A0A1B0GUV1 79 aa11.28□□□□□ -0.6
RNF40-206ENST00000564260 VCYO14598 125 aa11.28□□□□□ -0.6
RNF40-206ENST00000564260 ORMDL3Q8N138 153 aa11.28□□□□□ -0.6
RNF40-206ENST00000564260 NRACQ8N912 160 aa11.28□□□□□ -0.6
RNF40-206ENST00000564260 RPS10P5Q9NQ39 176 aa11.28□□□□□ -0.6
RNF40-206ENST00000564260 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
RNF40-206ENST00000564260 FRAS1Q86XX4 4008 aa11.27□□□□□ -0.61
RNF40-206ENST00000564260 AMTP48728 403 aa11.27□□□□□ -0.61
RNF40-206ENST00000564260 TMEM262E9PQX1 116 aa11.26□□□□□ -0.61
RNF40-206ENST00000564260 APCSP02743 223 aa11.26□□□□□ -0.61
RNF40-206ENST00000564260 PMCHP20382 165 aa11.26□□□□□ -0.61
RNF40-206ENST00000564260 RPS10P46783 165 aaKnown RBP11.26□□□□□ -0.61
RNF40-206ENST00000564260 Q0VG73 95 aa11.26□□□□□ -0.61
RNF40-206ENST00000564260 RMI2Q96E14 147 aa11.26□□□□□ -0.61
RNF40-206ENST00000564260 KIR2DL4Q99706 377 aa11.26□□□□□ -0.61
RNF40-206ENST00000564260 TM2D2Q9BX73 214 aa11.26□□□□□ -0.61
RNF40-206ENST00000564260 PRSS29PA6NIE9 313 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 UBE2L6O14933 153 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 IGHV3-30P01768 117 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 IGHV3-33P01772 117 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 HLA-DQA1P01909 254 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 MT-ND6P03923 174 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 IGHV3-30-3P0DP02 117 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 IGHV3-30-5P0DP03 117 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 SMAGPQ0VAQ4 97 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 Q6ZRN7 208 aaPredicted RBP11.25□□□□□ -0.61
RNF40-206ENST00000564260 GNB1LQ9BYB4 327 aa11.25□□□□□ -0.61
RNF40-206ENST00000564260 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
RNF40-206ENST00000564260 D6R8Y8 96 aa11.24□□□□□ -0.61
RNF40-206ENST00000564260 TNFRSF6BO95407 300 aa11.24□□□□□ -0.61
RNF40-206ENST00000564260 TMEM136Q6ZRR5 245 aa11.24□□□□□ -0.61
RNF40-206ENST00000564260 FAT2Q9NYQ8 4349 aa11.23□□□□□ -0.61
RNF40-206ENST00000564260 GAS8-AS1O95177 125 aa11.23□□□□□ -0.61
RNF40-206ENST00000564260 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
RNF40-206ENST00000564260 MPV17L2Q567V2 206 aa11.23□□□□□ -0.61
RNF40-206ENST00000564260 DNAH17Q9UFH2 4485 aa11.23□□□□□ -0.61
RNF40-206ENST00000564260 SMKR1H3BMG3 65 aa11.22□□□□□ -0.61
RNF40-206ENST00000564260 TSHBP01222 138 aa11.22□□□□□ -0.61
RNF40-206ENST00000564260 ESDP10768 282 aa11.22□□□□□ -0.61
RNF40-206ENST00000564260 RBX1P62877 108 aa11.22□□□□□ -0.61
RNF40-206ENST00000564260 ATRAIDQ6UW56 229 aa11.22□□□□□ -0.61
RNF40-206ENST00000564260 PRELID3AQ96N28 172 aa11.22□□□□□ -0.61
RNF40-206ENST00000564260 K7EMI3 77 aa11.21□□□□□ -0.61
RNF40-206ENST00000564260 CRPP02741 224 aa11.21□□□□□ -0.61
RNF40-206ENST00000564260 FCER1GP30273 86 aa11.21□□□□□ -0.61
RNF40-206ENST00000564260 MIAQ16674 131 aa11.21□□□□□ -0.61
RNF40-206ENST00000564260 SMIM2Q9BVW6 85 aa11.21□□□□□ -0.61
RNF40-206ENST00000564260 PRR34Q9NV39 138 aa11.21□□□□□ -0.61
RNF40-206ENST00000564260 ANGP03950 147 aaKnown RBP11.2□□□□□ -0.62
RNF40-206ENST00000564260 GAGE6Q13070 117 aa11.2□□□□□ -0.62
RNF40-206ENST00000564260 TMEM18Q96B42 140 aa11.2□□□□□ -0.62
RNF40-206ENST00000564260 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
RNF40-206ENST00000564260 HECTD4Q9Y4D8 3996 aa11.19□□□□□ -0.62
RNF40-206ENST00000564260 EREGO14944 169 aa11.19□□□□□ -0.62
RNF40-206ENST00000564260 NPYP01303 97 aa11.19□□□□□ -0.62
RNF40-206ENST00000564260 MRPL52Q86TS9 123 aaKnown RBP11.19□□□□□ -0.62
RNF40-206ENST00000564260 MAP1LC3AQ9H492 121 aa11.19□□□□□ -0.62
RNF40-206ENST00000564260 CSDC2Q9Y534 153 aaKnown RBP11.19□□□□□ -0.62
RNF40-206ENST00000564260 TRAV8-4A0A0B4J246 113 aa11.18□□□□□ -0.62
RNF40-206ENST00000564260 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
RNF40-206ENST00000564260 SLC7A5P1Q8MH63 180 aa11.18□□□□□ -0.62
RNF40-206ENST00000564260 Q8N3U1 123 aa11.18□□□□□ -0.62
RNF40-206ENST00000564260 A0A1B0GVY2 172 aa11.17□□□□□ -0.62
RNF40-206ENST00000564260 PSCAO43653 123 aa11.17□□□□□ -0.62
RNF40-206ENST00000564260 TNP2Q05952 138 aa11.17□□□□□ -0.62
RNF40-206ENST00000564260 Q8N976 141 aa11.17□□□□□ -0.62
RNF40-206ENST00000564260 UBE2WQ96B02 151 aa11.17□□□□□ -0.62
RNF40-206ENST00000564260 TMEM101Q96IK0 257 aa11.17□□□□□ -0.62
RNF40-206ENST00000564260 Q9HAA7 133 aa11.17□□□□□ -0.62
RNF40-206ENST00000564260 FGF6P10767 208 aa11.16□□□□□ -0.62
RNF40-206ENST00000564260 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
RNF40-206ENST00000564260 TIMM21Q9BVV7 248 aa11.16□□□□□ -0.62
RNF40-206ENST00000564260 C1orf43Q9BWL3 253 aa11.16□□□□□ -0.62
RNF40-206ENST00000564260 NXT2Q9NPJ8 142 aaKnown RBP11.16□□□□□ -0.62
RNF40-206ENST00000564260 SMCO4Q9NRQ5 59 aa11.16□□□□□ -0.62
RNF40-206ENST00000564260 RAB5AP20339 215 aa11.15□□□□□ -0.62
RNF40-206ENST00000564260 G0S2P27469 103 aa11.15□□□□□ -0.62
RNF40-206ENST00000564260 ENHOQ6UWT2 76 aa11.15□□□□□ -0.62
RNF40-206ENST00000564260 REG3AQ06141 175 aa11.14□□□□□ -0.63
RNF40-206ENST00000564260 LINC00269Q8N2A0 174 aa11.14□□□□□ -0.63
RNF40-206ENST00000564260 Q8N8P6 123 aa11.14□□□□□ -0.63
RNF40-206ENST00000564260 IGLV4-60A0A075B6I1 120 aa11.13□□□□□ -0.63
RNF40-206ENST00000564260 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.13□□□□□ -0.63
RNF40-206ENST00000564260 A0A087WTM6 91 aa11.13□□□□□ -0.63
RNF40-206ENST00000564260 IGKV2-29A2NJV5 120 aaPredicted RBP11.13□□□□□ -0.63
RNF40-206ENST00000564260 ORMDL2Q53FV1 153 aa11.13□□□□□ -0.63
RNF40-206ENST00000564260 OR5A1Q8NGJ0 315 aa11.13□□□□□ -0.63
RNF40-206ENST00000564260 IGKV2D-24A0A075B6R9 120 aa11.12□□□□□ -0.63
RNF40-206ENST00000564260 CCL25O15444 150 aa11.12□□□□□ -0.63
RNF40-206ENST00000564260 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
RNF40-206ENST00000564260 RNASEKQ6P5S7 137 aaKnown RBP11.12□□□□□ -0.63
RNF40-206ENST00000564260 YPEL4Q96NS1 127 aa11.12□□□□□ -0.63
RNF40-206ENST00000564260 MRPL18Q9H0U6 180 aaKnown RBP11.12□□□□□ -0.63
RNF40-206ENST00000564260 SPANXA1Q9NS26 97 aa11.12□□□□□ -0.63
RNF40-206ENST00000564260 LINC01549A6NIU2 74 aa11.11□□□□□ -0.63
RNF40-206ENST00000564260 DGAT2L7PQ6IED9 249 aa11.11□□□□□ -0.63
RNF40-206ENST00000564260 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
RNF40-206ENST00000564260 PKD1P98161 4303 aa11.11□□□□□ -0.63
RNF40-206ENST00000564260 TGIF2-C20orf24A0A0A6YYL0 155 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms