RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 MED9Q9NWA0 146 aa15.29■□□□□ 0.04
NME3-206ENST00000564252 C9orf62Q8N4C0 152 aa15.28■□□□□ 0.04
NME3-206ENST00000564252 hDV102S1A0JD36 115 aa15.27■□□□□ 0.04
NME3-206ENST00000564252 CTRLP40313 264 aa15.27■□□□□ 0.04
NME3-206ENST00000564252 BIN3Q9NQY0 253 aa15.27■□□□□ 0.04
NME3-206ENST00000564252 BCL2P10415 239 aa15.26■□□□□ 0.03
NME3-206ENST00000564252 CIRBPQ14011 172 aaKnown RBP15.26■□□□□ 0.03
NME3-206ENST00000564252 WDR73Q6P4I2 378 aa15.26■□□□□ 0.03
NME3-206ENST00000564252 NUDT10Q8NFP7 164 aa15.26■□□□□ 0.03
NME3-206ENST00000564252 NUDT11Q96G61 164 aa15.26■□□□□ 0.03
NME3-206ENST00000564252 SLPIP03973 132 aa15.25■□□□□ 0.03
NME3-206ENST00000564252 CNFNQ9BYD5 112 aa15.25■□□□□ 0.03
NME3-206ENST00000564252 UBE2L6O14933 153 aa15.24■□□□□ 0.03
NME3-206ENST00000564252 AMTP48728 403 aa15.24■□□□□ 0.03
NME3-206ENST00000564252 COTL1Q14019 142 aa15.24■□□□□ 0.03
NME3-206ENST00000564252 TWIST1Q15672 202 aa15.22■□□□□ 0.03
NME3-206ENST00000564252 GATD1Q8NB37 220 aa15.22■□□□□ 0.03
NME3-206ENST00000564252 AP5S1Q9NUS5 200 aa15.22■□□□□ 0.03
NME3-206ENST00000564252 IGHV3-64A0A075B6Q5 118 aa15.21■□□□□ 0.03
NME3-206ENST00000564252 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.2■□□□□ 0.02
NME3-206ENST00000564252 TRAV26-2A0A0B4J265 109 aa15.2■□□□□ 0.02
NME3-206ENST00000564252 K7EN84 100 aa15.2■□□□□ 0.02
NME3-206ENST00000564252 RNASE7Q9H1E1 156 aaKnown RBP15.2■□□□□ 0.02
NME3-206ENST00000564252 RPP21Q9H633 154 aaKnown RBP15.2■□□□□ 0.02
NME3-206ENST00000564252 C15orf56Q8N910 161 aa15.19■□□□□ 0.02
NME3-206ENST00000564252 CHTF8P0CG12 524 aa15.18■□□□□ 0.02
NME3-206ENST00000564252 TAGLN2P37802 199 aaKnown RBP15.18■□□□□ 0.02
NME3-206ENST00000564252 SLC51BQ86UW2 128 aa15.18■□□□□ 0.02
NME3-206ENST00000564252 TCTE3Q8IZS6 198 aa15.18■□□□□ 0.02
NME3-206ENST00000564252 RNF185Q96GF1 192 aa15.18■□□□□ 0.02
NME3-206ENST00000564252 UBR4Q5T4S7 5183 aa15.17■□□□□ 0.02
NME3-206ENST00000564252 GAGE12HA6NDE8 117 aa15.17■□□□□ 0.02
NME3-206ENST00000564252 OCC1Q8TAD7 63 aa15.17■□□□□ 0.02
NME3-206ENST00000564252 SPACA4Q8TDM5 124 aa15.17■□□□□ 0.02
NME3-206ENST00000564252 A0A087WYN8 130 aa15.16■□□□□ 0.02
NME3-206ENST00000564252 Q6ZNX1 250 aa15.16■□□□□ 0.02
NME3-206ENST00000564252 GTSF1Q8WW33 167 aa15.16■□□□□ 0.02
NME3-206ENST00000564252 RPL39LQ96EH5 51 aaKnown RBP15.16■□□□□ 0.02
NME3-206ENST00000564252 PLA2G2DQ9UNK4 145 aa15.16■□□□□ 0.02
NME3-206ENST00000564252 IGKV3OR2-268A0A0C4DH90 116 aa15.14■□□□□ 0.01
NME3-206ENST00000564252 MT1HL1P0DM35 61 aa15.14■□□□□ 0.01
NME3-206ENST00000564252 FOXA3P55318 350 aaPredicted RBP15.14■□□□□ 0.01
NME3-206ENST00000564252 DPH3Q96FX2 82 aa15.14■□□□□ 0.01
NME3-206ENST00000564252 NCR2O95944 276 aa15.13■□□□□ 0.01
NME3-206ENST00000564252 CFAP161Q6P656 301 aa15.13■□□□□ 0.01
NME3-206ENST00000564252 Q6ZRU5 148 aa15.13■□□□□ 0.01
NME3-206ENST00000564252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.12■□□□□ 0.01
NME3-206ENST00000564252 IGKV2-29A2NJV5 120 aaPredicted RBP15.12■□□□□ 0.01
NME3-206ENST00000564252 AMMECR1LQ6DCA0 310 aa15.12■□□□□ 0.01
NME3-206ENST00000564252 PLAC8Q9NZF1 115 aa15.12■□□□□ 0.01
NME3-206ENST00000564252 TNXBP22105 4242 aa15.12■□□□□ 0.01
NME3-206ENST00000564252 H7C423 109 aa15.11■□□□□ 0.01
NME3-206ENST00000564252 SMIM15Q7Z3B0 74 aa15.11■□□□□ 0.01
NME3-206ENST00000564252 CHCHD10Q8WYQ3 142 aaPredicted RBP15.11■□□□□ 0.01
NME3-206ENST00000564252 SDHAF1A6NFY7 115 aa15.1■□□□□ 0.01
NME3-206ENST00000564252 APCSP02743 223 aa15.1■□□□□ 0.01
NME3-206ENST00000564252 HIGD2BQ4VC39 106 aa15.1■□□□□ 0.01
NME3-206ENST00000564252 RNASEKQ6P5S7 137 aaKnown RBP15.1■□□□□ 0.01
NME3-206ENST00000564252 TEX261Q6UWH6 196 aa15.1■□□□□ 0.01
NME3-206ENST00000564252 RPS10P46783 165 aaKnown RBP15.09■□□□□ 0.01
NME3-206ENST00000564252 COX6A2Q02221 97 aa15.09■□□□□ 0.01
NME3-206ENST00000564252 GATCO43716 136 aaKnown RBP15.08■□□□□ 0
NME3-206ENST00000564252 FGF6P10767 208 aa15.08■□□□□ 0
NME3-206ENST00000564252 TMEM250H0YL14 139 aa15.07■□□□□ 0
NME3-206ENST00000564252 FAM231DQ6ZW35 169 aa15.07■□□□□ 0
NME3-206ENST00000564252 PRSS3P2Q8NHM4 247 aa15.07■□□□□ 0
NME3-206ENST00000564252 GVQW2A0A096LPI5 108 aaPredicted RBP15.06■□□□□ 0
NME3-206ENST00000564252 PHOX2AO14813 284 aa15.06■□□□□ 0
NME3-206ENST00000564252 NDUFS6O75380 124 aaKnown RBP15.06■□□□□ 0
NME3-206ENST00000564252 TRBV6-5A0A0K0K1A5 114 aa15.05■□□□□ -0
NME3-206ENST00000564252 FAM231BA6NCW3 169 aa15.05■□□□□ -0
NME3-206ENST00000564252 A8MWL6 223 aa15.05■□□□□ -0
NME3-206ENST00000564252 I3L3M4 83 aa15.05■□□□□ -0
NME3-206ENST00000564252 ZNF25P17030 456 aaPredicted RBP15.05■□□□□ -0
NME3-206ENST00000564252 FOXI1Q12951 378 aa15.05■□□□□ -0
NME3-206ENST00000564252 OR5A1Q8NGJ0 315 aa15.04■□□□□ -0
NME3-206ENST00000564252 IGKV2-24A0A0C4DH68 120 aa15.03■□□□□ -0
NME3-206ENST00000564252 GAS8-AS1O95177 125 aa15.03■□□□□ -0
NME3-206ENST00000564252 PMCHP20382 165 aa15.03■□□□□ -0
NME3-206ENST00000564252 MAJINQ3KP22 176 aa15.03■□□□□ -0
NME3-206ENST00000564252 CT83Q5H943 113 aa15.03■□□□□ -0
NME3-206ENST00000564252 C7orf33Q8WU49 177 aa15.03■□□□□ -0
NME3-206ENST00000564252 ESDP10768 282 aa15.02■□□□□ -0
NME3-206ENST00000564252 BLOC1S1P78537 153 aa15.02■□□□□ -0
NME3-206ENST00000564252 ALKAL2Q6UX46 152 aa15.02■□□□□ -0
NME3-206ENST00000564252 LYPD6BQ8NI32 183 aa15.02■□□□□ -0
NME3-206ENST00000564252 TSHBP01222 138 aa15.01□□□□□ -0.01
NME3-206ENST00000564252 XCL1P47992 114 aa15□□□□□ -0.01
NME3-206ENST00000564252 STPG4Q8N801 248 aa15□□□□□ -0.01
NME3-206ENST00000564252 TMEM101Q96IK0 257 aa15□□□□□ -0.01
NME3-206ENST00000564252 BTF3L4Q96K17 158 aa15□□□□□ -0.01
NME3-206ENST00000564252 A0A096LNI7 61 aa14.99□□□□□ -0.01
NME3-206ENST00000564252 LINC00959A0A1B0GUT2 108 aa14.99□□□□□ -0.01
NME3-206ENST00000564252 CEBPGP53567 150 aa14.99□□□□□ -0.01
NME3-206ENST00000564252 ST20Q9HBF5 79 aa14.99□□□□□ -0.01
NME3-206ENST00000564252 TMEM242Q9NWH2 141 aa14.99□□□□□ -0.01
NME3-206ENST00000564252 CCL25O15444 150 aa14.98□□□□□ -0.01
NME3-206ENST00000564252 BORCS7Q96B45 105 aa14.98□□□□□ -0.01
NME3-206ENST00000564252 POLR2KP53803 58 aaKnown RBP14.97□□□□□ -0.01
NME3-206ENST00000564252 PRR3P79522 188 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms