RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 PPP1R1AQ13522 171 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 COX19Q49B96 90 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 DNLZQ5SXM8 178 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 CFAP126Q5VTH2 177 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 C10orf113Q5VZT2 155 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 PCP2Q8IVA1 136 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 TVP23CQ96ET8 276 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 C14orf144Q96I85 54 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 SMIM8Q96KF7 97 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 FAM167A-AS1Q96KT0 104 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 SAMD10Q9BYL1 202 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 GTSF1LQ9H1H1 148 aa3.48□□□□□ -1.85
HERPUD1-208ENST00000563911 IGKV2D-24A0A075B6R9 120 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 TRAV8-3A0A0A6YYJ7 113 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 MUC21A0A0G2JKD1 596 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 A0A0J9YXV3 536 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 LINC00862A6NCI5 91 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 CENPXA8MT69 81 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 TSTD3H0UI37 97 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 SSSCA1O60232 199 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 COX7A2P2O60397 106 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 PTTG1O95997 202 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 TYMSP04818 313 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 PFN1P07737 140 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 NBEAP1P0C6P0 100 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 PET100P0DJ07 73 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 ZNF138P52744 262 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 SSBP1Q04837 148 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 CIRBPQ14011 172 aaKnown RBP3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 ZNF266Q14584 549 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 VAMP3Q15836 100 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 TDRG1Q3Y452 100 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 Q6AWC8 147 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 KRTAP26-1Q6PEX3 210 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 ENHOQ6UWT2 76 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 TEX43Q6ZNM6 134 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 S100A7AQ86SG5 101 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 BOD1L2Q8IYS8 172 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 C9orf163Q8N9P6 203 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 ATP6V0E2Q8NHE4 81 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 SFT2D1Q8WV19 159 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 CIB3Q96Q77 187 aaPredicted RBP3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 GGACTQ9BVM4 153 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 SLC25A2Q9BXI2 301 aa3.47□□□□□ -1.85
HERPUD1-208ENST00000563911 IGLV4-69A0A075B6H9 119 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 DUXBA0A1W2PPF3 345 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 FNDC10F2Z333 226 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 M0R2P5 195 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 RGS5O15539 181 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 SFT2D2O95562 160 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 HIST1H1EP10412 219 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 S100A7P31151 101 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 RAB31Q13636 194 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 TMEM128Q5BJH2 165 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 MRPL52Q86TS9 123 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 NIT1Q86X76 327 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 Q9H521 79 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 C11orf1Q9H5F2 150 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 MCUBQ9NWR8 336 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 TMEM14CQ9P0S9 112 aa3.46□□□□□ -1.86
HERPUD1-208ENST00000563911 TRBV6-4A0A1B0GX49 114 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 C7orf66A4D0T2 115 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 M0R036 132 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 SNAI2O43623 268 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 ZNF25P17030 456 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 ZNF80P51504 273 aaPredicted RBP3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 RAB2AP61019 212 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 RPL19P84098 196 aaKnown RBP3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 TMEM78Q5T7P6 136 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 LINC00299Q6ZSB3 139 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 MIR17HGQ75NE6 70 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 UBE2WQ96B02 151 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 FXYD5Q96DB9 178 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 VPS25Q9BRG1 176 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 MUC17Q685J3 4493 aa3.45□□□□□ -1.86
HERPUD1-208ENST00000563911 FAM24AA6NFZ4 105 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 GGTLC3B5MD39 225 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 KRBOX1C9JBD0 128 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 SCO1O75880 301 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 TCRBP04435 133 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 DEFB116Q30KQ4 102 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 ZFP2Q6ZN57 461 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 COMMD7Q86VX2 200 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 TMEM75Q8N9X5 138 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 OR2T35Q8NGX2 323 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 SLC39A9Q9NUM3 307 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 SCP2D1Q9UJQ7 156 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 TIMM9Q9Y5J7 89 aa3.44□□□□□ -1.86
HERPUD1-208ENST00000563911 TRAV8-1A0A0A6YYK1 113 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 F6UZH7 168 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 CST7O76096 145 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 OR10J4P0C629 311 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 RNASE3P12724 160 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 INPP1P49441 399 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 PKIAP61925 76 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 MRPS10P82664 201 aaKnown RBP3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 PDE6HQ13956 83 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 RHOHQ15669 191 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 ATP6V1FQ16864 119 aa3.43□□□□□ -1.86
HERPUD1-208ENST00000563911 C12orf45Q8N5I9 185 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms