RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 RNF185Q96GF1 192 aa18.67■□□□□ 0.58
NME3-203ENST00000563367 TMEM191AQ9H0A3 160 aa18.67■□□□□ 0.58
NME3-203ENST00000563367 COTL1Q14019 142 aa18.66■□□□□ 0.58
NME3-203ENST00000563367 KRTAP4-5Q9BYR2 181 aa18.66■□□□□ 0.58
NME3-203ENST00000563367 CLPSL2Q6UWE3 100 aa18.65■□□□□ 0.58
NME3-203ENST00000563367 C1orf43Q9BWL3 253 aa18.65■□□□□ 0.58
NME3-203ENST00000563367 PRR34Q9NV39 138 aa18.65■□□□□ 0.58
NME3-203ENST00000563367 NAT8BQ9UHF3 227 aa18.65■□□□□ 0.58
NME3-203ENST00000563367 AMTP48728 403 aa18.64■□□□□ 0.57
NME3-203ENST00000563367 RIGQ13278 110 aa18.64■□□□□ 0.57
NME3-203ENST00000563367 LINC00269Q8N2A0 174 aa18.64■□□□□ 0.57
NME3-203ENST00000563367 SMIM27A0A1W2PRY6 76 aa18.63■□□□□ 0.57
NME3-203ENST00000563367 RAB4AP20338 218 aa18.63■□□□□ 0.57
NME3-203ENST00000563367 RAB14P61106 215 aa18.63■□□□□ 0.57
NME3-203ENST00000563367 AMN1Q8IY45 258 aa18.63■□□□□ 0.57
NME3-203ENST00000563367 C20orf203Q8NBC4 194 aa18.63■□□□□ 0.57
NME3-203ENST00000563367 MIAQ16674 131 aa18.62■□□□□ 0.57
NME3-203ENST00000563367 IGLV4-60A0A075B6I1 120 aa18.61■□□□□ 0.57
NME3-203ENST00000563367 TRBV6-5A0A0K0K1A5 114 aa18.61■□□□□ 0.57
NME3-203ENST00000563367 SDHAF1A6NFY7 115 aa18.61■□□□□ 0.57
NME3-203ENST00000563367 XGP55808 180 aa18.61■□□□□ 0.57
NME3-203ENST00000563367 PCLOQ9Y6V0 5065 aa18.61■□□□□ 0.57
NME3-203ENST00000563367 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.6■□□□□ 0.57
NME3-203ENST00000563367 A0A1B0GUV1 79 aa18.6■□□□□ 0.57
NME3-203ENST00000563367 RPS10P46783 165 aaKnown RBP18.59■□□□□ 0.57
NME3-203ENST00000563367 UBE2L6O14933 153 aa18.58■□□□□ 0.56
NME3-203ENST00000563367 REG3AQ06141 175 aa18.58■□□□□ 0.56
NME3-203ENST00000563367 KRTAP26-1Q6PEX3 210 aa18.58■□□□□ 0.56
NME3-203ENST00000563367 MRAP2Q96G30 205 aa18.58■□□□□ 0.56
NME3-203ENST00000563367 NCR2O95944 276 aa18.57■□□□□ 0.56
NME3-203ENST00000563367 DNAH8Q96JB1 4490 aa18.57■□□□□ 0.56
NME3-203ENST00000563367 SMKR1H3BMG3 65 aa18.56■□□□□ 0.56
NME3-203ENST00000563367 IFITM2Q01629 132 aa18.56■□□□□ 0.56
NME3-203ENST00000563367 CLLU1Q5K131 121 aa18.56■□□□□ 0.56
NME3-203ENST00000563367 Q8N1X5 172 aa18.56■□□□□ 0.56
NME3-203ENST00000563367 ST20Q9HBF5 79 aa18.56■□□□□ 0.56
NME3-203ENST00000563367 I3L3M4 83 aa18.55■□□□□ 0.56
NME3-203ENST00000563367 PMCHP20382 165 aa18.55■□□□□ 0.56
NME3-203ENST00000563367 TMEM70Q9BUB7 260 aa18.55■□□□□ 0.56
NME3-203ENST00000563367 HLA-DQA1P01909 254 aa18.54■□□□□ 0.56
NME3-203ENST00000563367 APCSP02743 223 aa18.54■□□□□ 0.56
NME3-203ENST00000563367 ABCA13Q86UQ4 5058 aa18.53■□□□□ 0.56
NME3-203ENST00000563367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.53■□□□□ 0.56
NME3-203ENST00000563367 IGKV2-29A2NJV5 120 aaPredicted RBP18.53■□□□□ 0.56
NME3-203ENST00000563367 CAMPP49913 170 aa18.53■□□□□ 0.56
NME3-203ENST00000563367 POLR2KP53803 58 aaKnown RBP18.53■□□□□ 0.56
NME3-203ENST00000563367 IGLV10-54A0A075B6I4 117 aa18.52■□□□□ 0.56
NME3-203ENST00000563367 TSHBP01222 138 aa18.52■□□□□ 0.56
NME3-203ENST00000563367 FAM104BQ5XKR9 115 aa18.52■□□□□ 0.56
NME3-203ENST00000563367 HAMPP81172 84 aa18.51■□□□□ 0.55
NME3-203ENST00000563367 NRACQ8N912 160 aa18.51■□□□□ 0.55
NME3-203ENST00000563367 TMEM242Q9NWH2 141 aa18.51■□□□□ 0.55
NME3-203ENST00000563367 FAM30AQ9NZY2 134 aa18.51■□□□□ 0.55
NME3-203ENST00000563367 USP17L23D6RBM5 183 aa18.5■□□□□ 0.55
NME3-203ENST00000563367 LINC01620Q4KN68 170 aa18.5■□□□□ 0.55
NME3-203ENST00000563367 MRPL51Q4U2R6 128 aaKnown RBP18.5■□□□□ 0.55
NME3-203ENST00000563367 MRPL54Q6P161 138 aaKnown RBP18.5■□□□□ 0.55
NME3-203ENST00000563367 A0A1B0GW15 77 aa18.49■□□□□ 0.55
NME3-203ENST00000563367 TRBV27A0A0K0K1C4 114 aa18.48■□□□□ 0.55
NME3-203ENST00000563367 H7C423 109 aa18.48■□□□□ 0.55
NME3-203ENST00000563367 ESDP10768 282 aa18.48■□□□□ 0.55
NME3-203ENST00000563367 TRAV8-4A0A0B4J246 113 aa18.47■□□□□ 0.55
NME3-203ENST00000563367 A0A1B0GXF2 115 aa18.47■□□□□ 0.55
NME3-203ENST00000563367 FGF6P10767 208 aa18.47■□□□□ 0.55
NME3-203ENST00000563367 C14orf177Q52M58 125 aa18.47■□□□□ 0.55
NME3-203ENST00000563367 AMMECR1LQ6DCA0 310 aa18.47■□□□□ 0.55
NME3-203ENST00000563367 PNRC1Q12796 327 aaPredicted RBP18.46■□□□□ 0.55
NME3-203ENST00000563367 RNASEKQ6P5S7 137 aaKnown RBP18.46■□□□□ 0.55
NME3-203ENST00000563367 PPP1R2P9O14990 202 aa18.45■□□□□ 0.54
NME3-203ENST00000563367 HBBP68871 147 aa18.45■□□□□ 0.54
NME3-203ENST00000563367 PPP1R17O96001 155 aa18.44■□□□□ 0.54
NME3-203ENST00000563367 SUMO2P61956 95 aaKnown RBP18.44■□□□□ 0.54
NME3-203ENST00000563367 FAT1Q14517 4588 aa18.43■□□□□ 0.54
NME3-203ENST00000563367 IGKV3OR2-268A0A0C4DH90 116 aa18.43■□□□□ 0.54
NME3-203ENST00000563367 VCYO14598 125 aa18.43■□□□□ 0.54
NME3-203ENST00000563367 PRSS1P07477 247 aa18.43■□□□□ 0.54
NME3-203ENST00000563367 S100A8P05109 93 aa18.42■□□□□ 0.54
NME3-203ENST00000563367 Q6ZSA8 131 aa18.42■□□□□ 0.54
NME3-203ENST00000563367 LINC00862A6NCI5 91 aa18.41■□□□□ 0.54
NME3-203ENST00000563367 CKS2P33552 79 aa18.41■□□□□ 0.54
NME3-203ENST00000563367 SMR3BP02814 79 aaPredicted RBP18.4■□□□□ 0.54
NME3-203ENST00000563367 MT-ND4LP03901 98 aa18.4■□□□□ 0.54
NME3-203ENST00000563367 ZNF25P17030 456 aaPredicted RBP18.4■□□□□ 0.54
NME3-203ENST00000563367 ANAPC16Q96DE5 110 aa18.4■□□□□ 0.54
NME3-203ENST00000563367 F8W036 122 aa18.39■□□□□ 0.53
NME3-203ENST00000563367 TRBV24-1A0A075B6N3 115 aa18.38■□□□□ 0.53
NME3-203ENST00000563367 ADCYAP1P18509 176 aa18.38■□□□□ 0.53
NME3-203ENST00000563367 ATP5L2Q7Z4Y8 100 aa18.38■□□□□ 0.53
NME3-203ENST00000563367 C7orf77A4D0Y5 90 aa18.37■□□□□ 0.53
NME3-203ENST00000563367 EPM2AB3EWF7 344 aa18.37■□□□□ 0.53
NME3-203ENST00000563367 D6R8Y8 96 aa18.37■□□□□ 0.53
NME3-203ENST00000563367 FCER1GP30273 86 aa18.37■□□□□ 0.53
NME3-203ENST00000563367 UQCC3Q6UW78 93 aa18.37■□□□□ 0.53
NME3-203ENST00000563367 C20orf78Q9BR46 151 aa18.37■□□□□ 0.53
NME3-203ENST00000563367 GAGE12HA6NDE8 117 aa18.36■□□□□ 0.53
NME3-203ENST00000563367 TNFRSF6BO95407 300 aa18.36■□□□□ 0.53
NME3-203ENST00000563367 MRPL52Q86TS9 123 aaKnown RBP18.36■□□□□ 0.53
NME3-203ENST00000563367 OR5A1Q8NGJ0 315 aa18.36■□□□□ 0.53
NME3-203ENST00000563367 TMEM101Q96IK0 257 aa18.36■□□□□ 0.53
NME3-203ENST00000563367 BTF3L4Q96K17 158 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms