RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 EMP1P54849 157 aa6.91□□□□□ -1.3
UBFD1-202ENST00000563366 RIPPLY3P57055 190 aa6.91□□□□□ -1.3
UBFD1-202ENST00000563366 LGALS9CQ6DKI2 356 aa6.91□□□□□ -1.3
UBFD1-202ENST00000563366 C2orf66Q6UXQ4 117 aa6.91□□□□□ -1.3
UBFD1-202ENST00000563366 Q6ZN92 141 aa6.91□□□□□ -1.3
UBFD1-202ENST00000563366 ERASQ7Z444 233 aa6.91□□□□□ -1.3
UBFD1-202ENST00000563366 ZNF479Q96JC4 524 aa6.91□□□□□ -1.3
UBFD1-202ENST00000563366 PRADC1Q9BSG0 188 aa6.91□□□□□ -1.3
UBFD1-202ENST00000563366 VAMP8Q9BV40 100 aa6.91□□□□□ -1.3
UBFD1-202ENST00000563366 IGHV4-28A0A0C4DH34 117 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 NPSP0C0P6 89 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 SPART-AS1P0CW21 52 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 PTTG1IPP53801 180 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 SMAGPQ0VAQ4 97 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 COTL1Q14019 142 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 DAZ4Q86SG3 579 aaKnown RBP6.9□□□□□ -1.3
UBFD1-202ENST00000563366 Q8NAQ8 132 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 NEXN-AS1Q8NBZ9 246 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 SCGB3A1Q96QR1 104 aa6.9□□□□□ -1.3
UBFD1-202ENST00000563366 DAZ3Q9NR90 486 aaKnown RBP6.9□□□□□ -1.3
UBFD1-202ENST00000563366 TRRAPQ9Y4A5 3859 aa6.9□□□□□ -1.31
UBFD1-202ENST00000563366 HSBP1L1C9JCN9 74 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 TSHBP01222 138 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 PRSS1P07477 247 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 DEFB130BP0DP73 79 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 DEFB130AP0DP74 79 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 PKIAP61925 76 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 TMEM97Q5BJF2 176 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 FAM222AQ5U5X8 452 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 LINC00173Q6ZV60 143 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 Q8N976 141 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 DKK2Q9UBU2 259 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 ANK2Q01484 3957 aa6.89□□□□□ -1.31
UBFD1-202ENST00000563366 TRAV12-1A0A0B4J245 112 aa6.88□□□□□ -1.31
UBFD1-202ENST00000563366 H0Y8G0 127 aa6.88□□□□□ -1.31
UBFD1-202ENST00000563366 P0DMU3 169 aa6.88□□□□□ -1.31
UBFD1-202ENST00000563366 FAM231AP0DMU4 169 aa6.88□□□□□ -1.31
UBFD1-202ENST00000563366 FAM231CP0DMU5 169 aa6.88□□□□□ -1.31
UBFD1-202ENST00000563366 DAD1P61803 113 aa6.88□□□□□ -1.31
UBFD1-202ENST00000563366 KPRPQ5T749 579 aaPredicted RBP6.88□□□□□ -1.31
UBFD1-202ENST00000563366 NEGR1Q7Z3B1 354 aa6.88□□□□□ -1.31
UBFD1-202ENST00000563366 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
UBFD1-202ENST00000563366 C20orf203Q8NBC4 194 aa6.88□□□□□ -1.31
UBFD1-202ENST00000563366 TRAV9-2A0A087WT02 112 aa6.87□□□□□ -1.31
UBFD1-202ENST00000563366 ATP5G1P05496 136 aa6.87□□□□□ -1.31
UBFD1-202ENST00000563366 CRYBA4P53673 196 aa6.87□□□□□ -1.31
UBFD1-202ENST00000563366 FHL2Q14192 279 aa6.87□□□□□ -1.31
UBFD1-202ENST00000563366 ZNRF2Q8NHG8 242 aa6.87□□□□□ -1.31
UBFD1-202ENST00000563366 C11orf68Q9H3H3 251 aaKnown RBP6.87□□□□□ -1.31
UBFD1-202ENST00000563366 PRO0255Q9UI72 69 aa6.87□□□□□ -1.31
UBFD1-202ENST00000563366 PKD1L1Q8TDX9 2849 aa6.86□□□□□ -1.31
UBFD1-202ENST00000563366 PLNP26678 52 aa6.86□□□□□ -1.31
UBFD1-202ENST00000563366 UBE2D3P61077 147 aa6.86□□□□□ -1.31
UBFD1-202ENST00000563366 UBE2D2P62837 147 aa6.86□□□□□ -1.31
UBFD1-202ENST00000563366 GTSF1LQ9H1H1 148 aa6.86□□□□□ -1.31
UBFD1-202ENST00000563366 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
UBFD1-202ENST00000563366 HHLA3Q9XRX5 114 aa6.86□□□□□ -1.31
UBFD1-202ENST00000563366 PYGO1Q9Y3Y4 419 aa6.86□□□□□ -1.31
UBFD1-202ENST00000563366 A0A087WX48 190 aa6.85□□□□□ -1.31
UBFD1-202ENST00000563366 IGIPA6NJ69 53 aa6.85□□□□□ -1.31
UBFD1-202ENST00000563366 DPM2O94777 84 aa6.85□□□□□ -1.31
UBFD1-202ENST00000563366 PAM16Q9Y3D7 125 aa6.85□□□□□ -1.31
UBFD1-202ENST00000563366 GAGE12JA6NER3 117 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 F8VRH5 84 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 H7C423 109 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 IGKCP01834 107 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 GAGE1Q13065 139 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 GAGE4Q13068 117 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 GAGE5Q13069 117 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 PMVKQ15126 192 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 SH2D6Q7Z4S9 175 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 ZNF664Q8N3J9 261 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 BAALCQ8WXS3 180 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 TIMM21Q9BVV7 248 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
UBFD1-202ENST00000563366 CMYA5Q8N3K9 4069 aa6.83□□□□□ -1.32
UBFD1-202ENST00000563366 TRBV25-1A0A075B6N4 114 aa6.83□□□□□ -1.32
UBFD1-202ENST00000563366 GAGE12HA6NDE8 117 aa6.83□□□□□ -1.32
UBFD1-202ENST00000563366 PCP4L1A6NKN8 68 aa6.83□□□□□ -1.32
UBFD1-202ENST00000563366 RPL39P62891 51 aaKnown RBP6.83□□□□□ -1.32
UBFD1-202ENST00000563366 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
UBFD1-202ENST00000563366 ATOH7Q8N100 152 aa6.83□□□□□ -1.32
UBFD1-202ENST00000563366 PHLDA1Q8WV24 401 aaPredicted RBP6.83□□□□□ -1.32
UBFD1-202ENST00000563366 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
UBFD1-202ENST00000563366 TRAV26-1A0A087WT03 109 aa6.82□□□□□ -1.32
UBFD1-202ENST00000563366 IGHV3-38A0A0C4DH36 116 aa6.82□□□□□ -1.32
UBFD1-202ENST00000563366 UBE2L6O14933 153 aa6.82□□□□□ -1.32
UBFD1-202ENST00000563366 DEFB4AO15263 64 aa6.82□□□□□ -1.32
UBFD1-202ENST00000563366 LINC00694P0DN24 101 aa6.82□□□□□ -1.32
UBFD1-202ENST00000563366 DGAT2L7PQ6IED9 249 aa6.82□□□□□ -1.32
UBFD1-202ENST00000563366 CHCHD7Q9BUK0 85 aa6.82□□□□□ -1.32
UBFD1-202ENST00000563366 VCX2Q9H322 139 aa6.82□□□□□ -1.32
UBFD1-202ENST00000563366 CSDC2Q9Y534 153 aaKnown RBP6.82□□□□□ -1.32
UBFD1-202ENST00000563366 K7EIL1 84 aa6.81□□□□□ -1.32
UBFD1-202ENST00000563366 ZNF25P17030 456 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms