RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 RMI2Q96E14 147 aa5.45□□□□□ -1.54
GINS3-204ENST00000561952 TMEM70Q9BUB7 260 aa5.45□□□□□ -1.54
GINS3-204ENST00000561952 FLG2Q5D862 2391 aaPredicted RBP5.45□□□□□ -1.54
GINS3-204ENST00000561952 TRBV20OR9-2A0A075B6H5 130 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 TRBV24-1A0A075B6N3 115 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 TRBV10-1A0A0K0K1A3 114 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 PPP1R2P9O14990 202 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 CRPP02741 224 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 SMIM17P0DL12 118 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 RAB5AP20339 215 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 RAB4BP61018 213 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 ADIRFQ15847 76 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 MPV17L2Q567V2 206 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 CENPWQ5EE01 88 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 LINC01551Q86U37 167 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 ISOC2Q96AB3 205 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 IMMP2LQ96T52 175 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 CHCHD5Q9BSY4 110 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 MLST8Q9BVC4 326 aa5.44□□□□□ -1.54
GINS3-204ENST00000561952 TRBV6-8A0A0A6YYG3 113 aa5.43□□□□□ -1.54
GINS3-204ENST00000561952 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
GINS3-204ENST00000561952 SNAI2O43623 268 aa5.43□□□□□ -1.54
GINS3-204ENST00000561952 HLA-DQA1P01909 254 aa5.43□□□□□ -1.54
GINS3-204ENST00000561952 ANGP03950 147 aaKnown RBP5.43□□□□□ -1.54
GINS3-204ENST00000561952 GAGE6Q13070 117 aa5.43□□□□□ -1.54
GINS3-204ENST00000561952 OCC1Q8TAD7 63 aa5.43□□□□□ -1.54
GINS3-204ENST00000561952 DEFB104AQ8WTQ1 72 aa5.43□□□□□ -1.54
GINS3-204ENST00000561952 AP1S3Q96PC3 154 aa5.43□□□□□ -1.54
GINS3-204ENST00000561952 SRRM2Q9UQ35 2752 aaKnown RBP5.42□□□□□ -1.54
GINS3-204ENST00000561952 DMBT1Q9UGM3 2413 aaPredicted RBP5.42□□□□□ -1.54
GINS3-204ENST00000561952 CXCL1P09341 107 aa5.42□□□□□ -1.54
GINS3-204ENST00000561952 OR5AL1P0C617 328 aa5.42□□□□□ -1.54
GINS3-204ENST00000561952 Q8N976 141 aa5.42□□□□□ -1.54
GINS3-204ENST00000561952 FER1L6-AS1Q8NA97 138 aa5.42□□□□□ -1.54
GINS3-204ENST00000561952 OR2D3Q8NGH3 330 aa5.42□□□□□ -1.54
GINS3-204ENST00000561952 OR10G8Q8NGN5 311 aa5.42□□□□□ -1.54
GINS3-204ENST00000561952 DAZAP1Q96EP5 407 aaKnown RBP5.42□□□□□ -1.54
GINS3-204ENST00000561952 SMIM12Q96EX1 92 aa5.42□□□□□ -1.54
GINS3-204ENST00000561952 C1orf43Q9BWL3 253 aa5.42□□□□□ -1.54
GINS3-204ENST00000561952 COX11Q9Y6N1 276 aa5.42□□□□□ -1.54
GINS3-204ENST00000561952 TRAV9-1A0A075B6T8 112 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 C1orf196B1AJZ1 125 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 K7EN84 100 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 IGLV2-8P01709 118 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 GNG4P50150 75 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 RAB5BP61020 215 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 Q0VG73 95 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 ENHOQ6UWT2 76 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 BTF3L4Q96K17 158 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 CHCHD7Q9BUK0 85 aa5.41□□□□□ -1.54
GINS3-204ENST00000561952 TGIF2-C20orf24A0A0A6YYL0 155 aa5.4□□□□□ -1.54
GINS3-204ENST00000561952 P01737 135 aa5.4□□□□□ -1.54
GINS3-204ENST00000561952 S100PP25815 95 aa5.4□□□□□ -1.54
GINS3-204ENST00000561952 SUMO4Q6EEV6 95 aa5.4□□□□□ -1.54
GINS3-204ENST00000561952 NTM-AS1Q6ZSK4 140 aa5.4□□□□□ -1.54
GINS3-204ENST00000561952 SCXQ7RTU7 201 aa5.4□□□□□ -1.54
GINS3-204ENST00000561952 OSTCQ9NRP0 149 aa5.4□□□□□ -1.54
GINS3-204ENST00000561952 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.4□□□□□ -1.54
GINS3-204ENST00000561952 IGLV10-54A0A075B6I4 117 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 TRBV25-1A0A075B6N4 114 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 PHOX2AO14813 284 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 IGLC6P0CF74 106 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 RBX1P62877 108 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 LYZL1Q6UWQ5 148 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 FAM231DQ6ZW35 169 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 LINC00269Q8N2A0 174 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 BIN3Q9NQY0 253 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 KIF25-AS1Q9Y6Z4 181 aa5.39□□□□□ -1.55
GINS3-204ENST00000561952 IGHV1-24A0A0C4DH33 117 aa5.38□□□□□ -1.55
GINS3-204ENST00000561952 C19orf71A6NCJ1 209 aa5.38□□□□□ -1.55
GINS3-204ENST00000561952 C5orf52A6NGY3 159 aa5.38□□□□□ -1.55
GINS3-204ENST00000561952 USP17L23D6RBM5 183 aa5.38□□□□□ -1.55
GINS3-204ENST00000561952 PLA2G1BP04054 148 aaKnown RBP5.38□□□□□ -1.55
GINS3-204ENST00000561952 RPS10P46783 165 aaKnown RBP5.38□□□□□ -1.55
GINS3-204ENST00000561952 RPS20P60866 119 aaKnown RBP5.38□□□□□ -1.55
GINS3-204ENST00000561952 CACNG7P62955 275 aa5.38□□□□□ -1.55
GINS3-204ENST00000561952 Q6ZSA8 131 aa5.38□□□□□ -1.55
GINS3-204ENST00000561952 RNASE7Q9H1E1 156 aaKnown RBP5.38□□□□□ -1.55
GINS3-204ENST00000561952 V9GYV3 84 aa5.38□□□□□ -1.55
GINS3-204ENST00000561952 XKRY2A2RUG3 117 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 H7C1H1 209 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 M0QY20 66 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 TRGC1P0CF51 173 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 PKIAP61925 76 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 TWIST1Q15672 202 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 MIAQ16674 131 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 C14orf177Q52M58 125 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 TMEM97Q5BJF2 176 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 CIRBP-AS1Q8TBR5 109 aa5.37□□□□□ -1.55
GINS3-204ENST00000561952 PKHD1L1Q86WI1 4243 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 TRAV26-2A0A0B4J265 109 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 IGKV3OR2-268A0A0C4DH90 116 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 SMIM27A0A1W2PRY6 76 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 UBE2L6O14933 153 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 PRSS1P07477 247 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 NTF3P20783 257 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 RASL11AQ6T310 242 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 NUDT10Q8NFP7 164 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 NUDT11Q96G61 164 aa5.36□□□□□ -1.55
GINS3-204ENST00000561952 TMEM243Q9BU79 118 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms