RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 KRTAP26-1Q6PEX3 210 aa16.59■□□□□ 0.25
MSLN-203ENST00000561896 C20orf203Q8NBC4 194 aa16.59■□□□□ 0.25
MSLN-203ENST00000561896 TRAV8-4A0A0B4J246 113 aa16.58■□□□□ 0.24
MSLN-203ENST00000561896 USP17L23D6RBM5 183 aa16.58■□□□□ 0.24
MSLN-203ENST00000561896 HLA-DQA1P01909 254 aa16.58■□□□□ 0.24
MSLN-203ENST00000561896 LINC01551Q86U37 167 aa16.58■□□□□ 0.24
MSLN-203ENST00000561896 LINC01620Q4KN68 170 aa16.57■□□□□ 0.24
MSLN-203ENST00000561896 GFRA4Q9GZZ7 299 aa16.57■□□□□ 0.24
MSLN-203ENST00000561896 DMBT1Q9UGM3 2413 aaPredicted RBP16.57■□□□□ 0.24
MSLN-203ENST00000561896 FLG2Q5D862 2391 aaPredicted RBP16.56■□□□□ 0.24
MSLN-203ENST00000561896 FAM231BA6NCW3 169 aa16.56■□□□□ 0.24
MSLN-203ENST00000561896 AMTP48728 403 aa16.56■□□□□ 0.24
MSLN-203ENST00000561896 CLPSL2Q6UWE3 100 aa16.56■□□□□ 0.24
MSLN-203ENST00000561896 TRAV26-2A0A0B4J265 109 aa16.55■□□□□ 0.24
MSLN-203ENST00000561896 A0A1B0GVG6 124 aa16.55■□□□□ 0.24
MSLN-203ENST00000561896 ZNF727A8MUV8 499 aa16.55■□□□□ 0.24
MSLN-203ENST00000561896 UBE2L6O14933 153 aa16.55■□□□□ 0.24
MSLN-203ENST00000561896 NCR2O95944 276 aa16.55■□□□□ 0.24
MSLN-203ENST00000561896 SRP19P09132 144 aaKnown RBP16.55■□□□□ 0.24
MSLN-203ENST00000561896 DGAT2L7PQ6IED9 249 aa16.55■□□□□ 0.24
MSLN-203ENST00000561896 BORCS7Q96B45 105 aa16.55■□□□□ 0.24
MSLN-203ENST00000561896 IGLV4-60A0A075B6I1 120 aa16.54■□□□□ 0.24
MSLN-203ENST00000561896 TSKUQ8WUA8 353 aa16.54■□□□□ 0.24
MSLN-203ENST00000561896 CHAC1Q9BUX1 264 aa16.54■□□□□ 0.24
MSLN-203ENST00000561896 OSTCQ9NRP0 149 aa16.54■□□□□ 0.24
MSLN-203ENST00000561896 SCXQ7RTU7 201 aa16.53■□□□□ 0.24
MSLN-203ENST00000561896 CLRN3Q8NCR9 226 aa16.53■□□□□ 0.24
MSLN-203ENST00000561896 PLA2G1BP04054 148 aaKnown RBP16.52■□□□□ 0.24
MSLN-203ENST00000561896 PRSS1P07477 247 aa16.52■□□□□ 0.24
MSLN-203ENST00000561896 MYCBP2O75592 4640 aa16.51■□□□□ 0.23
MSLN-203ENST00000561896 A0A1B0GUT8 65 aa16.51■□□□□ 0.23
MSLN-203ENST00000561896 HIGD1CA8MV81 97 aa16.51■□□□□ 0.23
MSLN-203ENST00000561896 H7C423 109 aa16.51■□□□□ 0.23
MSLN-203ENST00000561896 FAM74A3Q4VXF1 159 aa16.51■□□□□ 0.23
MSLN-203ENST00000561896 RPL39LQ96EH5 51 aaKnown RBP16.51■□□□□ 0.23
MSLN-203ENST00000561896 TRBV6-5A0A0K0K1A5 114 aa16.5■□□□□ 0.23
MSLN-203ENST00000561896 LINC00528Q8N1L1 170 aa16.5■□□□□ 0.23
MSLN-203ENST00000561896 IGLV10-54A0A075B6I4 117 aa16.49■□□□□ 0.23
MSLN-203ENST00000561896 SDHAF1A6NFY7 115 aa16.49■□□□□ 0.23
MSLN-203ENST00000561896 TMEM191AQ9H0A3 160 aa16.49■□□□□ 0.23
MSLN-203ENST00000561896 C9orf163Q8N9P6 203 aa16.48■□□□□ 0.23
MSLN-203ENST00000561896 DEFB104AQ8WTQ1 72 aa16.48■□□□□ 0.23
MSLN-203ENST00000561896 APCSP02743 223 aa16.46■□□□□ 0.23
MSLN-203ENST00000561896 TMEM241Q24JQ0 296 aa16.46■□□□□ 0.23
MSLN-203ENST00000561896 CIRBP-AS1Q8TBR5 109 aa16.46■□□□□ 0.23
MSLN-203ENST00000561896 I3L3M4 83 aa16.45■□□□□ 0.22
MSLN-203ENST00000561896 SMDT1Q9H4I9 107 aa16.45■□□□□ 0.22
MSLN-203ENST00000561896 V9GYV3 84 aa16.45■□□□□ 0.22
MSLN-203ENST00000561896 HERC1Q15751 4861 aa16.44■□□□□ 0.22
MSLN-203ENST00000561896 CNBPP62633 177 aaKnown RBP16.44■□□□□ 0.22
MSLN-203ENST00000561896 AMMECR1LQ6DCA0 310 aa16.44■□□□□ 0.22
MSLN-203ENST00000561896 ISOC2Q96AB3 205 aa16.44■□□□□ 0.22
MSLN-203ENST00000561896 MRAP2Q96G30 205 aa16.44■□□□□ 0.22
MSLN-203ENST00000561896 ZNF25P17030 456 aaPredicted RBP16.42■□□□□ 0.22
MSLN-203ENST00000561896 PMCHP20382 165 aa16.42■□□□□ 0.22
MSLN-203ENST00000561896 RIGQ13278 110 aa16.42■□□□□ 0.22
MSLN-203ENST00000561896 RNF185Q96GF1 192 aa16.42■□□□□ 0.22
MSLN-203ENST00000561896 ST20Q9HBF5 79 aa16.42■□□□□ 0.22
MSLN-203ENST00000561896 FGF6P10767 208 aa16.41■□□□□ 0.22
MSLN-203ENST00000561896 RAB4AP20338 218 aa16.41■□□□□ 0.22
MSLN-203ENST00000561896 RPL23P62829 140 aaKnown RBP16.41■□□□□ 0.22
MSLN-203ENST00000561896 PEA15Q15121 130 aa16.41■□□□□ 0.22
MSLN-203ENST00000561896 NUP35Q8NFH5 326 aa16.41■□□□□ 0.22
MSLN-203ENST00000561896 NAT8Q9UHE5 227 aa16.41■□□□□ 0.22
MSLN-203ENST00000561896 hDV102S1A0JD36 115 aa16.4■□□□□ 0.22
MSLN-203ENST00000561896 NAT8BQ9UHF3 227 aa16.4■□□□□ 0.22
MSLN-203ENST00000561896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.39■□□□□ 0.21
MSLN-203ENST00000561896 IGKV2-29A2NJV5 120 aaPredicted RBP16.39■□□□□ 0.21
MSLN-203ENST00000561896 GAS8-AS1O95177 125 aa16.39■□□□□ 0.21
MSLN-203ENST00000561896 ESDP10768 282 aa16.39■□□□□ 0.21
MSLN-203ENST00000561896 POLR2KP53803 58 aaKnown RBP16.39■□□□□ 0.21
MSLN-203ENST00000561896 RNASEKQ6P5S7 137 aaKnown RBP16.39■□□□□ 0.21
MSLN-203ENST00000561896 AP5S1Q9NUS5 200 aa16.39■□□□□ 0.21
MSLN-203ENST00000561896 TRBV27A0A0K0K1C4 114 aa16.38■□□□□ 0.21
MSLN-203ENST00000561896 C9JQL5 133 aa16.38■□□□□ 0.21
MSLN-203ENST00000561896 PPP1R17O96001 155 aa16.38■□□□□ 0.21
MSLN-203ENST00000561896 CFAP161Q6P656 301 aa16.38■□□□□ 0.21
MSLN-203ENST00000561896 SDIM1Q6ZPB5 146 aa16.38■□□□□ 0.21
MSLN-203ENST00000561896 AMN1Q8IY45 258 aa16.38■□□□□ 0.21
MSLN-203ENST00000561896 TSHBP01222 138 aa16.37■□□□□ 0.21
MSLN-203ENST00000561896 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.36■□□□□ 0.21
MSLN-203ENST00000561896 RPS10P46783 165 aaKnown RBP16.36■□□□□ 0.21
MSLN-203ENST00000561896 ADIRFQ15847 76 aa16.36■□□□□ 0.21
MSLN-203ENST00000561896 BTF3L4Q96K17 158 aa16.36■□□□□ 0.21
MSLN-203ENST00000561896 GAGE12HA6NDE8 117 aa16.35■□□□□ 0.21
MSLN-203ENST00000561896 TMEM101Q96IK0 257 aa16.35■□□□□ 0.21
MSLN-203ENST00000561896 SMIM27A0A1W2PRY6 76 aa16.34■□□□□ 0.21
MSLN-203ENST00000561896 KRTAP10-4P60372 401 aaPredicted RBP16.34■□□□□ 0.21
MSLN-203ENST00000561896 SRSF3P84103 164 aaKnown RBP16.34■□□□□ 0.21
MSLN-203ENST00000561896 OR5A1Q8NGJ0 315 aa16.34■□□□□ 0.21
MSLN-203ENST00000561896 CHCHD10Q8WYQ3 142 aaPredicted RBP16.34■□□□□ 0.21
MSLN-203ENST00000561896 TMEM242Q9NWH2 141 aa16.34■□□□□ 0.21
MSLN-203ENST00000561896 IGKV3OR2-268A0A0C4DH90 116 aa16.33■□□□□ 0.2
MSLN-203ENST00000561896 A0A1B0GW15 77 aa16.33■□□□□ 0.2
MSLN-203ENST00000561896 VCYO14598 125 aa16.33■□□□□ 0.2
MSLN-203ENST00000561896 MRPL52Q86TS9 123 aaKnown RBP16.33■□□□□ 0.2
MSLN-203ENST00000561896 C15orf56Q8N910 161 aa16.33■□□□□ 0.2
MSLN-203ENST00000561896 IGHV3-64A0A075B6Q5 118 aa16.32■□□□□ 0.2
MSLN-203ENST00000561896 SLPIP03973 132 aa16.32■□□□□ 0.2
MSLN-203ENST00000561896 CIRBPQ14011 172 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms