RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 TMEM70Q9BUB7 260 aa4.68□□□□□ -1.66
CAPN3-210ENST00000561817 TRBV27A0A0K0K1C4 114 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 A8MWV9 139 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 G3V4G9 280 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 K7EMI3 77 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 TCAPO15273 167 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 PPP1R17O96001 155 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 SMIM17P0DL12 118 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 HTN1P15515 57 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 DAZ2Q13117 558 aaKnown RBP4.67□□□□□ -1.66
CAPN3-210ENST00000561817 LAGE3Q14657 143 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 LINC01545Q5VT33 79 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 TMEM263Q8WUH6 116 aaKnown RBP4.67□□□□□ -1.66
CAPN3-210ENST00000561817 OVOL2Q9BRP0 275 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 C1QTNF4Q9BXJ3 329 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 CSTL1Q9H114 145 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 MRPL16Q9NX20 251 aaKnown RBP4.67□□□□□ -1.66
CAPN3-210ENST00000561817 Q9UF83 564 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 HSPB8Q9UJY1 196 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 GOLT1BQ9Y3E0 138 aa4.67□□□□□ -1.66
CAPN3-210ENST00000561817 PKD1L1Q8TDX9 2849 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 IGHV3-53P01767 116 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 PRB2P02812 416 aaPredicted RBP4.66□□□□□ -1.66
CAPN3-210ENST00000561817 RPL13AP40429 203 aaKnown RBP4.66□□□□□ -1.66
CAPN3-210ENST00000561817 PKIAP61925 76 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 LGALS9BQ3B8N2 356 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 FAM74A4Q5TZK3 123 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 ZFP2Q6ZN57 461 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 NEGR1Q7Z3B1 354 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 GTSCR1Q86UQ5 136 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 LINC00612Q8N6U2 182 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 TMEM208Q9BTX3 173 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 ST20Q9HBF5 79 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 V9GYY9 64 aa4.66□□□□□ -1.66
CAPN3-210ENST00000561817 IGHV3OR16-12A0A075B7B8 117 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 SDHAF1A6NFY7 115 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 LINC00587B1AMM8 73 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 RHODO00212 210 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 TSPAN13O95857 204 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 TSHBP01222 138 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 P0DMU3 169 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 FAM231AP0DMU4 169 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 FAM231CP0DMU5 169 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 KRTAP10-11P60412 298 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 EGFEM1PQ0D2K5 195 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 ZNF56Q15929 161 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 LGALS9CQ6DKI2 356 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 Q6ZTI0 123 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 LINC00336Q6ZUF6 198 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 KIR2DL5BQ8NHK3 375 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 TOMM6Q96B49 74 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 IFI27L1Q96BM0 104 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 C16orf74Q96GX8 76 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 PRO1933Q9H354 126 aa4.65□□□□□ -1.67
CAPN3-210ENST00000561817 TRAV9-2A0A087WT02 112 aa4.64□□□□□ -1.67
CAPN3-210ENST00000561817 TRGV1A0A0A0MS02 117 aa4.64□□□□□ -1.67
CAPN3-210ENST00000561817 IGHV3-73A0A0B4J1V6 119 aa4.64□□□□□ -1.67
CAPN3-210ENST00000561817 TRAV4A0A0B4J268 109 aa4.64□□□□□ -1.67
CAPN3-210ENST00000561817 RRN3P1Q2M238 152 aa4.64□□□□□ -1.67
CAPN3-210ENST00000561817 ORMDL2Q53FV1 153 aa4.64□□□□□ -1.67
CAPN3-210ENST00000561817 ATOH7Q8N100 152 aa4.64□□□□□ -1.67
CAPN3-210ENST00000561817 NEXN-AS1Q8NBZ9 246 aa4.64□□□□□ -1.67
CAPN3-210ENST00000561817 NOP10Q9NPE3 64 aaKnown RBP4.64□□□□□ -1.67
CAPN3-210ENST00000561817 NBEAL2Q6ZNJ1 2754 aa4.64□□□□□ -1.67
CAPN3-210ENST00000561817 SMIM9A6NGZ8 99 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 IGIPA6NJ69 53 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 ATP5LO75964 103 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 NUDT3O95989 172 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 RHOHQ15669 191 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 C2orf66Q6UXQ4 117 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 FAM104AQ969W3 186 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 DNAJC30Q96LL9 226 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 C18orf15Q96N68 181 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 PMCHL2Q9BQD1 86 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 VAMP8Q9BV40 100 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 PAM16Q9Y3D7 125 aa4.63□□□□□ -1.67
CAPN3-210ENST00000561817 TRAV12-1A0A0B4J245 112 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 C20orf202A1L168 122 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 H7C1H1 209 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 I3L3M4 83 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 IGLC3P0DOY3 106 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 IGHV4-30-4P0DP06 118 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 DDTP30046 118 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 DEFA6Q01524 100 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 SPATA45Q537H7 98 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 BAALCQ8WXS3 180 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 DKK2Q9UBU2 259 aa4.62□□□□□ -1.67
CAPN3-210ENST00000561817 A0A087WX48 190 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 TRBV10-1A0A0K0K1A3 114 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 hDV102S1A0JD36 115 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 GAGE12BA1L429 117 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 TSTD3H0UI37 97 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 GAGE7O76087 117 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 GAGE12FP0CL80 117 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 GAGE12GP0CL81 117 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 GAGE12IP0CL82 117 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 LINC00694P0DN24 101 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 APOC4P55056 127 aa4.61□□□□□ -1.67
CAPN3-210ENST00000561817 RPL39P62891 51 aaKnown RBP4.61□□□□□ -1.67
CAPN3-210ENST00000561817 FHL2Q14192 279 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms