RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 CKS2P33552 79 aa7.54□□□□□ -1.2
TUBGCP4-202ENST00000561691 SNRPD3P62318 126 aaKnown RBP7.54□□□□□ -1.2
TUBGCP4-202ENST00000561691 KHDC1LQ5JSQ8 128 aa7.54□□□□□ -1.2
TUBGCP4-202ENST00000561691 TMEM126AQ9H061 195 aa7.54□□□□□ -1.2
TUBGCP4-202ENST00000561691 MRPL35Q9NZE8 188 aaKnown RBP7.54□□□□□ -1.2
TUBGCP4-202ENST00000561691 PEMTQ9UBM1 199 aa7.54□□□□□ -1.2
TUBGCP4-202ENST00000561691 AGRNO00468 2067 aa7.53□□□□□ -1.2
TUBGCP4-202ENST00000561691 ZNF256Q9Y2P7 627 aaPredicted RBP7.53□□□□□ -1.2
TUBGCP4-202ENST00000561691 SORL1Q92673 2214 aa7.53□□□□□ -1.2
TUBGCP4-202ENST00000561691 A0A1W2PRX2 142 aa7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 CCL24O00175 119 aa7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 TCL1BO95988 128 aa7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 RBMY1A1P0DJD3 496 aaKnown RBP7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 RBMY1CP0DJD4 496 aa7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 GATA1P15976 413 aaPredicted RBP7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 RBMY1FQ15415 496 aaKnown RBP7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 C5orf47Q569G3 176 aa7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 MEIG1Q5JSS6 88 aa7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 NXT2Q9NPJ8 142 aaKnown RBP7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 CSDC2Q9Y534 153 aaKnown RBP7.52□□□□□ -1.2
TUBGCP4-202ENST00000561691 LOC107984156A0A0G2JMH3 177 aa7.52□□□□□ -1.21
TUBGCP4-202ENST00000561691 KNCNA6PVL3 124 aa7.52□□□□□ -1.21
TUBGCP4-202ENST00000561691 ARL17AQ8IVW1 177 aa7.52□□□□□ -1.21
TUBGCP4-202ENST00000561691 NRACQ8N912 160 aa7.52□□□□□ -1.21
TUBGCP4-202ENST00000561691 LINC01587Q99440 93 aa7.52□□□□□ -1.21
TUBGCP4-202ENST00000561691 TRAV12-2A0A075B6T6 113 aa7.51□□□□□ -1.21
TUBGCP4-202ENST00000561691 H3BMM0 161 aa7.51□□□□□ -1.21
TUBGCP4-202ENST00000561691 IGKV3-20P01619 116 aa7.51□□□□□ -1.21
TUBGCP4-202ENST00000561691 CD7P09564 240 aa7.51□□□□□ -1.21
TUBGCP4-202ENST00000561691 PLNP26678 52 aa7.51□□□□□ -1.21
TUBGCP4-202ENST00000561691 LINC00315P59091 139 aa7.51□□□□□ -1.21
TUBGCP4-202ENST00000561691 DEFB131AP59861 70 aa7.51□□□□□ -1.21
TUBGCP4-202ENST00000561691 MAP6D1Q9H9H5 199 aa7.51□□□□□ -1.21
TUBGCP4-202ENST00000561691 MUC4Q99102 2169 aa7.51□□□□□ -1.21
TUBGCP4-202ENST00000561691 IGLV2-18A0A075B6J9 118 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 TRAV12-3A0A0B4J271 114 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 INAFM1C9JVW0 142 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 DUSP14O95147 198 aaKnown RBP7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 SPINK13Q1W4C9 94 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 POM121L12Q8N7R1 296 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 KIF25-AS1Q9Y6Z4 181 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 WNK1Q9H4A3 2382 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 ODF3L2Q3SX64 289 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 C9orf85Q96MD7 179 aa7.5□□□□□ -1.21
TUBGCP4-202ENST00000561691 WIPF1O43516 503 aa7.49□□□□□ -1.21
TUBGCP4-202ENST00000561691 TNFRSF6BO95407 300 aa7.49□□□□□ -1.21
TUBGCP4-202ENST00000561691 SPANXN1Q5VSR9 72 aa7.49□□□□□ -1.21
TUBGCP4-202ENST00000561691 Q8N8P6 123 aa7.49□□□□□ -1.21
TUBGCP4-202ENST00000561691 LINC01600Q96MT4 127 aa7.49□□□□□ -1.21
TUBGCP4-202ENST00000561691 C2CD3Q4AC94 2353 aa7.49□□□□□ -1.21
TUBGCP4-202ENST00000561691 TRAV26-2A0A0B4J265 109 aa7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 TRAV25A0A0B4J276 109 aa7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 TRAV12-1A0A0B4J245 112 aa7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 M0R381 172 aa7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 SLC25A20O43772 301 aa7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 SCGB1C2P0DMR2 95 aa7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 MRPL23Q16540 153 aaKnown RBP7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 NDUFA11Q86Y39 141 aa7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 DYNLRB2Q8TF09 96 aa7.48□□□□□ -1.21
TUBGCP4-202ENST00000561691 IGHV1OR15-1A0A075B7D0 117 aa7.47□□□□□ -1.21
TUBGCP4-202ENST00000561691 Q8N1Y9 231 aa7.47□□□□□ -1.21
TUBGCP4-202ENST00000561691 C15orf53Q8NAA6 179 aa7.47□□□□□ -1.21
TUBGCP4-202ENST00000561691 JPT2Q9H910 190 aa7.47□□□□□ -1.21
TUBGCP4-202ENST00000561691 F8VRH5 84 aa7.46□□□□□ -1.21
TUBGCP4-202ENST00000561691 S100A4P26447 101 aaKnown RBP7.46□□□□□ -1.21
TUBGCP4-202ENST00000561691 C14orf178Q8N769 122 aaPredicted RBP7.46□□□□□ -1.21
TUBGCP4-202ENST00000561691 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.21
TUBGCP4-202ENST00000561691 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.21
TUBGCP4-202ENST00000561691 PHLDA3Q9Y5J5 127 aa7.46□□□□□ -1.21
TUBGCP4-202ENST00000561691 H7C1H1 209 aa7.46□□□□□ -1.22
TUBGCP4-202ENST00000561691 RPL13AP40429 203 aaKnown RBP7.46□□□□□ -1.22
TUBGCP4-202ENST00000561691 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
TUBGCP4-202ENST00000561691 TENM1Q9UKZ4 2725 aa7.46□□□□□ -1.22
TUBGCP4-202ENST00000561691 IGLV1-51P01701 117 aa7.45□□□□□ -1.22
TUBGCP4-202ENST00000561691 PLEKHB2Q96CS7 222 aa7.45□□□□□ -1.22
TUBGCP4-202ENST00000561691 DPH3P1Q9H4G8 78 aa7.45□□□□□ -1.22
TUBGCP4-202ENST00000561691 FLNBO75369 2602 aaKnown RBP7.45□□□□□ -1.22
TUBGCP4-202ENST00000561691 SMIM9A6NGZ8 99 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 PRM2P04554 102 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 C10orf126Q8N4M7 172 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 VWFP04275 2813 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 JMJD1CQ15652 2540 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 TRAV8-4A0A0B4J246 113 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 C9JAW5 83 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 LAGE3Q14657 143 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 NSUN5P1Q3KNT7 163 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 SPATA3Q8NHX4 192 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 BAALCQ8WXS3 180 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 RPL39LQ96EH5 51 aaKnown RBP7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 LINC00467Q9BRT7 94 aa7.44□□□□□ -1.22
TUBGCP4-202ENST00000561691 ZNF815PA8K554 130 aa7.43□□□□□ -1.22
TUBGCP4-202ENST00000561691 CRYGDP07320 174 aa7.43□□□□□ -1.22
TUBGCP4-202ENST00000561691 CFC1BP0CG36 223 aa7.43□□□□□ -1.22
TUBGCP4-202ENST00000561691 CFC1P0CG37 223 aa7.43□□□□□ -1.22
TUBGCP4-202ENST00000561691 LINC00694P0DN24 101 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms