RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 TRIAP1O43715 76 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 WISP2O76076 250 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 CASC2Q6XLA1 102 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 CCDC179H3BU77 68 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 IGKV4-1P06312 121 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 CLUHP3Q96NS8 147 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 CRIP1P50238 77 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 INSL3P51460 131 aa7.75□□□□□ -1.17
GTF3C1-202ENST00000561623 TMEM256-PLSCR3K7ERE1 68 aa7.74□□□□□ -1.17
GTF3C1-202ENST00000561623 MRPS12O15235 138 aaKnown RBP7.74□□□□□ -1.17
GTF3C1-202ENST00000561623 SLPIP03973 132 aa7.74□□□□□ -1.17
GTF3C1-202ENST00000561623 IGF1P05019 195 aa7.74□□□□□ -1.17
GTF3C1-202ENST00000561623 UBE2AP49459 152 aa7.74□□□□□ -1.17
GTF3C1-202ENST00000561623 FAM110AQ9BQ89 295 aa7.74□□□□□ -1.17
GTF3C1-202ENST00000561623 RNF152Q8N8N0 203 aa7.74□□□□□ -1.17
GTF3C1-202ENST00000561623 EIF4EBP1Q13541 118 aaPredicted RBP7.73□□□□□ -1.17
GTF3C1-202ENST00000561623 SEM1Q6ZVN7 128 aa7.73□□□□□ -1.17
GTF3C1-202ENST00000561623 SCXQ7RTU7 201 aa7.73□□□□□ -1.17
GTF3C1-202ENST00000561623 RNF185Q96GF1 192 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 TMEM223A0PJW6 202 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 HIGD2BQ4VC39 106 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 ENHOQ6UWT2 76 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 FAM236DA0A1B0GTK5 79 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 H0Y9J4 135 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 FAM236CP0DP71 79 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 XGP55808 180 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 HIST2H2BDQ6DRA6 164 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 CCDC140Q96MF4 163 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 NUP210Q8TEM1 1887 aaPredicted RBP7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 K7ERS5 55 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 SIRPDQ9H106 197 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 HHLA3Q9XRX5 114 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 DIRC1Q969H9 104 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 ZNF22P17026 224 aaPredicted RBP7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 UBE2D4Q9Y2X8 147 aa7.72□□□□□ -1.17
GTF3C1-202ENST00000561623 C10orf105Q8TEF2 133 aa7.71□□□□□ -1.17
GTF3C1-202ENST00000561623 LINC01548A6NM66 108 aa7.71□□□□□ -1.18
GTF3C1-202ENST00000561623 U3KQK5 164 aa7.71□□□□□ -1.18
GTF3C1-202ENST00000561623 ALPK3Q96L96 1907 aa7.71□□□□□ -1.18
GTF3C1-202ENST00000561623 DNAJC9-AS1A6NH13 148 aa7.71□□□□□ -1.18
GTF3C1-202ENST00000561623 NDUFB1O75438 58 aa7.71□□□□□ -1.18
GTF3C1-202ENST00000561623 A0A0J9YX75 114 aa7.71□□□□□ -1.18
GTF3C1-202ENST00000561623 SPAG11BQ08648 103 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 C20orf173Q96LM9 149 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 CDKN2A-AS1Q9UH64 79 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 LINC00467Q9BRT7 94 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 PIK3CD-AS1Q5SR53 167 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 LINC00310P59036 64 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 ADORA2A-AS1P86434 159 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 CFAP126Q5VTH2 177 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 RETNQ9HD89 108 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 A0A0J9YWU9 116 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 A8MZ25 164 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 NDUFA1O15239 70 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 IGFL2Q6UWQ7 119 aa7.7□□□□□ -1.18
GTF3C1-202ENST00000561623 K7EMT4 169 aa7.69□□□□□ -1.18
GTF3C1-202ENST00000561623 IGLV4-3A0A075B6K6 122 aa7.69□□□□□ -1.18
GTF3C1-202ENST00000561623 NDUFA7O95182 113 aa7.69□□□□□ -1.18
GTF3C1-202ENST00000561623 Q8N976 141 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 LINC00308Q8TCZ7 52 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 TRBV30A0A0K0K1B3 111 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 GAS8-AS1O95177 125 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 IGLV2-11P01706 119 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 C7orf33Q8WU49 177 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 NCOA6Q14686 2063 aaPredicted RBP7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 ACACBO00763 2458 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 H3BQ85 93 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 SMR3AQ99954 134 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 MYCNOSP40205 109 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 KLK12Q9UKR0 248 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 ZNF106Q9H2Y7 1883 aaKnown RBP7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 FREM1Q5H8C1 2179 aa7.68□□□□□ -1.18
GTF3C1-202ENST00000561623 IGKV2-24A0A0C4DH68 120 aa7.67□□□□□ -1.18
GTF3C1-202ENST00000561623 C2orf16Q68DN1 1984 aa7.67□□□□□ -1.18
GTF3C1-202ENST00000561623 COX7BP24311 80 aa7.67□□□□□ -1.18
GTF3C1-202ENST00000561623 ABCA2Q9BZC7 2435 aa7.67□□□□□ -1.18
GTF3C1-202ENST00000561623 TTC28Q96AY4 2481 aa7.67□□□□□ -1.18
GTF3C1-202ENST00000561623 TMEM263Q8WUH6 116 aaKnown RBP7.67□□□□□ -1.18
GTF3C1-202ENST00000561623 CXCL5P42830 114 aa7.67□□□□□ -1.18
GTF3C1-202ENST00000561623 A0A1W2PNU3 283 aaPredicted RBP7.66□□□□□ -1.18
GTF3C1-202ENST00000561623 Q6ZS46 218 aa7.66□□□□□ -1.18
GTF3C1-202ENST00000561623 KIAA1549LQ6ZVL6 1849 aa7.66□□□□□ -1.18
GTF3C1-202ENST00000561623 BPY2O14599 106 aa7.66□□□□□ -1.18
GTF3C1-202ENST00000561623 ZFAND2AQ8N6M9 145 aa7.66□□□□□ -1.18
GTF3C1-202ENST00000561623 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.66□□□□□ -1.18
GTF3C1-202ENST00000561623 SNURFQ9Y675 71 aa7.66□□□□□ -1.18
GTF3C1-202ENST00000561623 PROK1P58294 105 aa7.66□□□□□ -1.18
GTF3C1-202ENST00000561623 HIVEP3Q5T1R4 2406 aa7.66□□□□□ -1.18
GTF3C1-202ENST00000561623 Q6ZTI0 123 aa7.65□□□□□ -1.18
GTF3C1-202ENST00000561623 NUPR2A6NF83 97 aa7.65□□□□□ -1.18
GTF3C1-202ENST00000561623 CSPG4Q6UVK1 2322 aa7.65□□□□□ -1.18
GTF3C1-202ENST00000561623 NDUFC2-KCTD14E9PQ53 114 aa7.64□□□□□ -1.19
GTF3C1-202ENST00000561623 A0A096LNI7 61 aa7.64□□□□□ -1.19
GTF3C1-202ENST00000561623 LINC00574Q9H8X3 128 aa7.64□□□□□ -1.19
GTF3C1-202ENST00000561623 MAP6D1Q9H9H5 199 aa7.64□□□□□ -1.19
GTF3C1-202ENST00000561623 LINC00694P0DN24 101 aa7.64□□□□□ -1.19
GTF3C1-202ENST00000561623 NRACQ8N912 160 aa7.64□□□□□ -1.19
GTF3C1-202ENST00000561623 PDE6GP18545 87 aa7.64□□□□□ -1.19
GTF3C1-202ENST00000561623 SORL1Q92673 2214 aa7.64□□□□□ -1.19
GTF3C1-202ENST00000561623 MYO18BQ8IUG5 2567 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms