RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 KCNIP4Q6PIL6 250 aa13.63□□□□□ -0.23
TPM1-232ENST00000561425 UBE2WQ96B02 151 aa13.63□□□□□ -0.23
TPM1-232ENST00000561425 GFRA4Q9GZZ7 299 aa13.63□□□□□ -0.23
TPM1-232ENST00000561425 FRZBQ92765 325 aa13.62□□□□□ -0.23
TPM1-232ENST00000561425 CHCHD5Q9BSY4 110 aa13.62□□□□□ -0.23
TPM1-232ENST00000561425 CTDSP1Q9GZU7 261 aa13.62□□□□□ -0.23
TPM1-232ENST00000561425 RPS10P5Q9NQ39 176 aa13.62□□□□□ -0.23
TPM1-232ENST00000561425 C7orf77A4D0Y5 90 aa13.61□□□□□ -0.23
TPM1-232ENST00000561425 FAM231BA6NCW3 169 aa13.61□□□□□ -0.23
TPM1-232ENST00000561425 PGLYRP4Q96LB8 373 aa13.61□□□□□ -0.23
TPM1-232ENST00000561425 PRR34Q9NV39 138 aa13.61□□□□□ -0.23
TPM1-232ENST00000561425 TRBV25-1A0A075B6N4 114 aa13.6□□□□□ -0.23
TPM1-232ENST00000561425 IGKV2D-24A0A075B6R9 120 aa13.6□□□□□ -0.23
TPM1-232ENST00000561425 BAALCQ8WXS3 180 aa13.6□□□□□ -0.23
TPM1-232ENST00000561425 BORCS7Q96B45 105 aa13.6□□□□□ -0.23
TPM1-232ENST00000561425 IGHV1-24A0A0C4DH33 117 aa13.59□□□□□ -0.23
TPM1-232ENST00000561425 HIGD1CA8MV81 97 aa13.59□□□□□ -0.23
TPM1-232ENST00000561425 Q8N976 141 aa13.59□□□□□ -0.23
TPM1-232ENST00000561425 GATD1Q8NB37 220 aa13.59□□□□□ -0.23
TPM1-232ENST00000561425 TMEM70Q9BUB7 260 aa13.59□□□□□ -0.23
TPM1-232ENST00000561425 NAT8BQ9UHF3 227 aa13.59□□□□□ -0.23
TPM1-232ENST00000561425 SMIM27A0A1W2PRY6 76 aa13.58□□□□□ -0.24
TPM1-232ENST00000561425 RBX1P62877 108 aa13.58□□□□□ -0.24
TPM1-232ENST00000561425 LECT2O14960 151 aa13.57□□□□□ -0.24
TPM1-232ENST00000561425 ANGP03950 147 aaKnown RBP13.57□□□□□ -0.24
TPM1-232ENST00000561425 DNAH8Q96JB1 4490 aa13.56□□□□□ -0.24
TPM1-232ENST00000561425 A0A1B0GUV1 79 aa13.56□□□□□ -0.24
TPM1-232ENST00000561425 ATP6V1G1O75348 118 aa13.56□□□□□ -0.24
TPM1-232ENST00000561425 GAGE6Q13070 117 aa13.56□□□□□ -0.24
TPM1-232ENST00000561425 MIAQ16674 131 aa13.56□□□□□ -0.24
TPM1-232ENST00000561425 KRTAP26-1Q6PEX3 210 aa13.56□□□□□ -0.24
TPM1-232ENST00000561425 NUP35Q8NFH5 326 aa13.56□□□□□ -0.24
TPM1-232ENST00000561425 TMEM242Q9NWH2 141 aa13.56□□□□□ -0.24
TPM1-232ENST00000561425 S100PP25815 95 aa13.55□□□□□ -0.24
TPM1-232ENST00000561425 IMMP2LQ96T52 175 aa13.55□□□□□ -0.24
TPM1-232ENST00000561425 C1orf43Q9BWL3 253 aa13.55□□□□□ -0.24
TPM1-232ENST00000561425 FAM30AQ9NZY2 134 aa13.55□□□□□ -0.24
TPM1-232ENST00000561425 TRAV26-2A0A0B4J265 109 aa13.54□□□□□ -0.24
TPM1-232ENST00000561425 A0A1B0GUT8 65 aa13.53□□□□□ -0.24
TPM1-232ENST00000561425 CRPP02741 224 aa13.53□□□□□ -0.24
TPM1-232ENST00000561425 S100A1P23297 94 aa13.53□□□□□ -0.24
TPM1-232ENST00000561425 RIGQ13278 110 aa13.53□□□□□ -0.24
TPM1-232ENST00000561425 Q6ZSA8 131 aa13.53□□□□□ -0.24
TPM1-232ENST00000561425 SMIM15Q7Z3B0 74 aa13.53□□□□□ -0.24
TPM1-232ENST00000561425 C20orf203Q8NBC4 194 aa13.53□□□□□ -0.24
TPM1-232ENST00000561425 TMEM243Q9BU79 118 aa13.53□□□□□ -0.24
TPM1-232ENST00000561425 LINC00269Q8N2A0 174 aa13.52□□□□□ -0.25
TPM1-232ENST00000561425 FAT1Q14517 4588 aa13.51□□□□□ -0.25
TPM1-232ENST00000561425 COTL1Q14019 142 aa13.51□□□□□ -0.25
TPM1-232ENST00000561425 RPL39LQ96EH5 51 aaKnown RBP13.51□□□□□ -0.25
TPM1-232ENST00000561425 IGLV4-60A0A075B6I1 120 aa13.5□□□□□ -0.25
TPM1-232ENST00000561425 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.5□□□□□ -0.25
TPM1-232ENST00000561425 TRBV6-5A0A0K0K1A5 114 aa13.5□□□□□ -0.25
TPM1-232ENST00000561425 EPM2AB3EWF7 344 aa13.5□□□□□ -0.25
TPM1-232ENST00000561425 TMEM191AQ9H0A3 160 aa13.5□□□□□ -0.25
TPM1-232ENST00000561425 TRAV9-1A0A075B6T8 112 aa13.49□□□□□ -0.25
TPM1-232ENST00000561425 NCR2O95944 276 aa13.49□□□□□ -0.25
TPM1-232ENST00000561425 MRPL54Q6P161 138 aaKnown RBP13.49□□□□□ -0.25
TPM1-232ENST00000561425 RNF185Q96GF1 192 aa13.49□□□□□ -0.25
TPM1-232ENST00000561425 BTF3L4Q96K17 158 aa13.49□□□□□ -0.25
TPM1-232ENST00000561425 A0A1B0GW15 77 aa13.48□□□□□ -0.25
TPM1-232ENST00000561425 S100A8P05109 93 aa13.48□□□□□ -0.25
TPM1-232ENST00000561425 REG3AQ06141 175 aa13.48□□□□□ -0.25
TPM1-232ENST00000561425 C14orf177Q52M58 125 aa13.48□□□□□ -0.25
TPM1-232ENST00000561425 ATP5L2Q7Z4Y8 100 aa13.48□□□□□ -0.25
TPM1-232ENST00000561425 GAS8-AS1O95177 125 aa13.47□□□□□ -0.25
TPM1-232ENST00000561425 RAB4AP20338 218 aa13.47□□□□□ -0.25
TPM1-232ENST00000561425 AMTP48728 403 aa13.47□□□□□ -0.25
TPM1-232ENST00000561425 HBBP68871 147 aa13.47□□□□□ -0.25
TPM1-232ENST00000561425 DEFB104AQ8WTQ1 72 aa13.47□□□□□ -0.25
TPM1-232ENST00000561425 SMCO4Q9NRQ5 59 aa13.47□□□□□ -0.25
TPM1-232ENST00000561425 TRAV8-4A0A0B4J246 113 aa13.46□□□□□ -0.25
TPM1-232ENST00000561425 SDHAF1A6NFY7 115 aa13.46□□□□□ -0.25
TPM1-232ENST00000561425 CAMPP49913 170 aa13.46□□□□□ -0.25
TPM1-232ENST00000561425 USP17L23D6RBM5 183 aa13.45□□□□□ -0.26
TPM1-232ENST00000561425 H7C423 109 aa13.45□□□□□ -0.26
TPM1-232ENST00000561425 CLPSL2Q6UWE3 100 aa13.45□□□□□ -0.26
TPM1-232ENST00000561425 A0A1B0GXF2 115 aa13.44□□□□□ -0.26
TPM1-232ENST00000561425 SMR3BP02814 79 aaPredicted RBP13.44□□□□□ -0.26
TPM1-232ENST00000561425 POLR2KP53803 58 aaKnown RBP13.44□□□□□ -0.26
TPM1-232ENST00000561425 HAMPP81172 84 aa13.44□□□□□ -0.26
TPM1-232ENST00000561425 Q5VSD8 79 aa13.44□□□□□ -0.26
TPM1-232ENST00000561425 CBLN2Q8IUK8 224 aa13.44□□□□□ -0.26
TPM1-232ENST00000561425 I3L3M4 83 aa13.43□□□□□ -0.26
TPM1-232ENST00000561425 UBE2L6O14933 153 aa13.43□□□□□ -0.26
TPM1-232ENST00000561425 PRSS1P07477 247 aa13.43□□□□□ -0.26
TPM1-232ENST00000561425 LINC01620Q4KN68 170 aa13.43□□□□□ -0.26
TPM1-232ENST00000561425 MRAP2Q96G30 205 aa13.43□□□□□ -0.26
TPM1-232ENST00000561425 HLA-DQA1P01909 254 aa13.42□□□□□ -0.26
TPM1-232ENST00000561425 ESDP10768 282 aa13.42□□□□□ -0.26
TPM1-232ENST00000561425 DGAT2L7PQ6IED9 249 aa13.42□□□□□ -0.26
TPM1-232ENST00000561425 AMN1Q8IY45 258 aa13.42□□□□□ -0.26
TPM1-232ENST00000561425 RPS10P46783 165 aaKnown RBP13.41□□□□□ -0.26
TPM1-232ENST00000561425 ST20Q9HBF5 79 aa13.41□□□□□ -0.26
TPM1-232ENST00000561425 VPS13BQ7Z7G8 4022 aa13.4□□□□□ -0.26
TPM1-232ENST00000561425 TRBV27A0A0K0K1C4 114 aa13.4□□□□□ -0.26
TPM1-232ENST00000561425 APCSP02743 223 aa13.4□□□□□ -0.26
TPM1-232ENST00000561425 IGLV10-54A0A075B6I4 117 aa13.39□□□□□ -0.27
TPM1-232ENST00000561425 TGIF2-C20orf24A0A0A6YYL0 155 aa13.39□□□□□ -0.27
TPM1-232ENST00000561425 SCO1O75880 301 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms