RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CYSLTR1Q9Y271 337 aa7.26□□□□□ -1.25
USP3-219ENST00000561326 TSHBP01222 138 aa7.25□□□□□ -1.25
USP3-219ENST00000561326 GYPEP15421 78 aa7.25□□□□□ -1.25
USP3-219ENST00000561326 DEFA6Q01524 100 aa7.25□□□□□ -1.25
USP3-219ENST00000561326 SMAGPQ0VAQ4 97 aa7.25□□□□□ -1.25
USP3-219ENST00000561326 PHLDA1Q8WV24 401 aaPredicted RBP7.25□□□□□ -1.25
USP3-219ENST00000561326 TOMM6Q96B49 74 aa7.25□□□□□ -1.25
USP3-219ENST00000561326 SCGB3A1Q96QR1 104 aa7.25□□□□□ -1.25
USP3-219ENST00000561326 Q9UF83 564 aa7.25□□□□□ -1.25
USP3-219ENST00000561326 TENM3Q9P273 2699 aa7.24□□□□□ -1.25
USP3-219ENST00000561326 KRTDAPP60985 99 aa7.24□□□□□ -1.25
USP3-219ENST00000561326 MRPL23Q16540 153 aaKnown RBP7.24□□□□□ -1.25
USP3-219ENST00000561326 C2orf66Q6UXQ4 117 aa7.24□□□□□ -1.25
USP3-219ENST00000561326 ATP6V0E2Q8NHE4 81 aa7.24□□□□□ -1.25
USP3-219ENST00000561326 IFI27L1Q96BM0 104 aa7.24□□□□□ -1.25
USP3-219ENST00000561326 GTSF1LQ9H1H1 148 aa7.24□□□□□ -1.25
USP3-219ENST00000561326 TRAV26-1A0A087WT03 109 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 A0A096LNJ9 63 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 IGHV3-38A0A0C4DH36 116 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 A0A0J9YY99 117 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 H3BNG1 76 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.23□□□□□ -1.25
USP3-219ENST00000561326 SCGB1D1O95968 90 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 ERASQ7Z444 233 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 C20orf203Q8NBC4 194 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 DEFB104AQ8WTQ1 72 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 ICOSQ9Y6W8 199 aa7.23□□□□□ -1.25
USP3-219ENST00000561326 TRBV25-1A0A075B6N4 114 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 DEFB131BA0A096LNP1 70 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 LOC100131303A0A0U1RQF7 123 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 C20orf202A1L168 122 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 PRSS1P07477 247 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 C3orf79P0CE67 100 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 NANOS2P60321 138 aaKnown RBP7.22□□□□□ -1.25
USP3-219ENST00000561326 PAPPA-AS1Q5QFB9 102 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 PET117Q6UWS5 81 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 Q6ZN92 141 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 Q6ZTC4 211 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 TMEM141Q96I45 108 aa7.22□□□□□ -1.25
USP3-219ENST00000561326 TRAV10A0A0B4J240 114 aa7.21□□□□□ -1.26
USP3-219ENST00000561326 SYS1-DBNDD2H3BUS1 97 aa7.21□□□□□ -1.26
USP3-219ENST00000561326 JOSD1Q15040 202 aaPredicted RBP7.21□□□□□ -1.26
USP3-219ENST00000561326 VSIG2Q96IQ7 327 aa7.21□□□□□ -1.26
USP3-219ENST00000561326 TMEM243Q9BU79 118 aa7.21□□□□□ -1.26
USP3-219ENST00000561326 COL7A1Q02388 2944 aa7.21□□□□□ -1.26
USP3-219ENST00000561326 H7C423 109 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 UBE2L6O14933 153 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 NPSP0C0P6 89 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 SMIM6P0DI80 62 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 LINC00694P0DN24 101 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 RPL39P62891 51 aaKnown RBP7.2□□□□□ -1.26
USP3-219ENST00000561326 DGAT2L7PQ6IED9 249 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 LINC00173Q6ZV60 143 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 SPATA12Q7Z6I5 190 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 TIMM17AQ99595 171 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 CHCHD7Q9BUK0 85 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 PYGO1Q9Y3Y4 419 aa7.2□□□□□ -1.26
USP3-219ENST00000561326 TRBV6-8A0A0A6YYG3 113 aa7.19□□□□□ -1.26
USP3-219ENST00000561326 H0Y8G0 127 aa7.19□□□□□ -1.26
USP3-219ENST00000561326 NTM-AS1Q6ZSK4 140 aa7.19□□□□□ -1.26
USP3-219ENST00000561326 TIMM21Q9BVV7 248 aa7.19□□□□□ -1.26
USP3-219ENST00000561326 SPANXA1Q9NS26 97 aa7.19□□□□□ -1.26
USP3-219ENST00000561326 IGIPA6NJ69 53 aa7.18□□□□□ -1.26
USP3-219ENST00000561326 PYY3Q5JQD4 70 aa7.18□□□□□ -1.26
USP3-219ENST00000561326 AMMECR1LQ6DCA0 310 aa7.18□□□□□ -1.26
USP3-219ENST00000561326 VCX2Q9H322 139 aa7.18□□□□□ -1.26
USP3-219ENST00000561326 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.17□□□□□ -1.26
USP3-219ENST00000561326 A0A096LPF7 62 aa7.17□□□□□ -1.26
USP3-219ENST00000561326 IGKV2-29A2NJV5 120 aaPredicted RBP7.17□□□□□ -1.26
USP3-219ENST00000561326 PKIAP61925 76 aa7.17□□□□□ -1.26
USP3-219ENST00000561326 S100A12P80511 92 aa7.17□□□□□ -1.26
USP3-219ENST00000561326 LGALS9CQ6DKI2 356 aa7.17□□□□□ -1.26
USP3-219ENST00000561326 C15orf53Q8NAA6 179 aa7.17□□□□□ -1.26
USP3-219ENST00000561326 TMEM101Q96IK0 257 aa7.17□□□□□ -1.26
USP3-219ENST00000561326 CHCHD5Q9BSY4 110 aa7.17□□□□□ -1.26
USP3-219ENST00000561326 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
USP3-219ENST00000561326 TRAV12-1A0A0B4J245 112 aa7.16□□□□□ -1.26
USP3-219ENST00000561326 FGF6P10767 208 aa7.16□□□□□ -1.26
USP3-219ENST00000561326 ZNF25P17030 456 aaPredicted RBP7.16□□□□□ -1.26
USP3-219ENST00000561326 TIRAPP58753 221 aa7.16□□□□□ -1.26
USP3-219ENST00000561326 PMVKQ15126 192 aa7.16□□□□□ -1.26
USP3-219ENST00000561326 LINC01545Q5VT33 79 aa7.16□□□□□ -1.26
USP3-219ENST00000561326 MRPL52Q86TS9 123 aaKnown RBP7.16□□□□□ -1.26
USP3-219ENST00000561326 OR5A1Q8NGJ0 315 aa7.16□□□□□ -1.26
USP3-219ENST00000561326 UBE2D4Q9Y2X8 147 aa7.16□□□□□ -1.26
USP3-219ENST00000561326 A0A087WX48 190 aa7.15□□□□□ -1.26
USP3-219ENST00000561326 TRAV8-6A0A0B4J262 113 aa7.15□□□□□ -1.26
USP3-219ENST00000561326 TMEM262E9PQX1 116 aa7.15□□□□□ -1.26
USP3-219ENST00000561326 MRPS36P82909 103 aaKnown RBP7.15□□□□□ -1.26
USP3-219ENST00000561326 LELP1Q5T871 98 aa7.15□□□□□ -1.26
USP3-219ENST00000561326 TEX43Q6ZNM6 134 aa7.15□□□□□ -1.26
USP3-219ENST00000561326 LINC00518Q8N0U6 118 aa7.15□□□□□ -1.26
USP3-219ENST00000561326 BAALCQ8WXS3 180 aa7.15□□□□□ -1.26
USP3-219ENST00000561326 C12orf57Q99622 126 aa7.15□□□□□ -1.26
USP3-219ENST00000561326 HUWE1Q7Z6Z7 4374 aaKnown RBP7.14□□□□□ -1.27
USP3-219ENST00000561326 IGLV4-3A0A075B6K6 122 aa7.14□□□□□ -1.27
USP3-219ENST00000561326 PRSS29PA6NIE9 313 aa7.14□□□□□ -1.27
USP3-219ENST00000561326 HSBP1L1C9JCN9 74 aa7.14□□□□□ -1.27
USP3-219ENST00000561326 LYPD5Q6UWN5 251 aa7.14□□□□□ -1.27
USP3-219ENST00000561326 Q8N976 141 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms