RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 MUC21Q5SSG8 566 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 TMEM78Q5T7P6 136 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 UFSP1Q6NVU6 142 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 LINC00173Q6ZV60 143 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 ERASQ7Z444 233 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 C1orf158Q8N1D5 194 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 RNF185Q96GF1 192 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 C8orf49Q96NF6 230 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 SPXQ9BT56 116 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
SPG11-224ENST00000561268 FAT2Q9NYQ8 4349 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 PLAC8L1A1L4L8 177 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 CBY3A6NI87 242 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 F6UB75 175 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 H3BTX0 84 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 DPM2O94777 84 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 NXPH4O95158 308 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 NPYP01303 97 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 IGKCP01834 107 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 LAGE3Q14657 143 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 PAPPA-AS1Q5QFB9 102 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 AP1S3Q96PC3 154 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 ODF3Q96PU9 254 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 DKK2Q9UBU2 259 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 HHLA3Q9XRX5 114 aa4.89□□□□□ -1.63
SPG11-224ENST00000561268 IGKV2-40A0A087WW87 121 aaPredicted RBP4.88□□□□□ -1.63
SPG11-224ENST00000561268 TRAV21A0A0B4J279 112 aa4.88□□□□□ -1.63
SPG11-224ENST00000561268 GAGE12BA1L429 117 aa4.88□□□□□ -1.63
SPG11-224ENST00000561268 GAGE10A6NGK3 116 aa4.88□□□□□ -1.63
SPG11-224ENST00000561268 K7EP34 96 aa4.88□□□□□ -1.63
SPG11-224ENST00000561268 IGKV2D-40P01614 121 aaPredicted RBP4.88□□□□□ -1.63
SPG11-224ENST00000561268 ORM1P02763 201 aa4.88□□□□□ -1.63
SPG11-224ENST00000561268 ZNF80P51504 273 aaPredicted RBP4.88□□□□□ -1.63
SPG11-224ENST00000561268 OCIAD2Q56VL3 154 aa4.88□□□□□ -1.63
SPG11-224ENST00000561268 FAM19A4Q96LR4 140 aa4.88□□□□□ -1.63
SPG11-224ENST00000561268 VGLL1Q99990 258 aa4.88□□□□□ -1.63
SPG11-224ENST00000561268 CST9LQ9H4G1 147 aa4.88□□□□□ -1.63
SPG11-224ENST00000561268 A0A087WX48 190 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 DEFB131BA0A096LNP1 70 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 A0A1B0GWB2 263 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 IGLL5B9A064 214 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 DUSP14O95147 198 aaKnown RBP4.87□□□□□ -1.63
SPG11-224ENST00000561268 LEPP41159 167 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 NRACQ8N912 160 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 OR8A1Q8NGG7 326 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 C16orf92Q96LL3 132 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 AGPAT4-IT1Q9H0P7 198 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 PKHD1P08F94 4074 aa4.87□□□□□ -1.63
SPG11-224ENST00000561268 DNAH2Q9P225 4427 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 IGKV3D-20A0A0C4DH25 116 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 A0A1B0GVY2 172 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 A0A1W2PPM0 123 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 H0Y8G0 127 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 H7C1H1 209 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 NCR2O95944 276 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 INSP01308 110 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 SPART-AS1P0CW21 52 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 SMIM13P0DJ93 91 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 FABP2P12104 132 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 FXYD7P58549 80 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 FAM222AQ5U5X8 452 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 AMMECR1LQ6DCA0 310 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 NEGR1Q7Z3B1 354 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 RNF182Q8N6D2 247 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 LINC00612Q8N6U2 182 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 RNASE8Q8TDE3 154 aaKnown RBP4.86□□□□□ -1.63
SPG11-224ENST00000561268 TOMM6Q96B49 74 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 TPPP3Q9BW30 176 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 DPH3P1Q9H4G8 78 aa4.86□□□□□ -1.63
SPG11-224ENST00000561268 LYRM9A8MSI8 78 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 F8VRH5 84 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 F8W1H4 67 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.85□□□□□ -1.63
SPG11-224ENST00000561268 IGKV3-20P01619 116 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 PRSS1P07477 247 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 P0DMU3 169 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 FAM231AP0DMU4 169 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 FAM231CP0DMU5 169 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 SPINK13Q1W4C9 94 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 RRN3P1Q2M238 152 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 PIK3CD-AS1Q5SR53 167 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 Q6ZR54 194 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 OR10J6PQ8NGY7 276 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 SMIM2Q9BVW6 85 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 KRTAP4-5Q9BYR2 181 aa4.85□□□□□ -1.63
SPG11-224ENST00000561268 DNAH17Q9UFH2 4485 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 TRBV25-1A0A075B6N4 114 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 TRAV8-6A0A0B4J262 113 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 TRBV6-5A0A0K0K1A5 114 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 LOC389332A0A1B0GUA5 103 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 J3QR89 54 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 SCGB1A1P11684 91 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 ASIPP42127 132 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 CRYBA4P53673 196 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 SUMO2P61956 95 aaKnown RBP4.84□□□□□ -1.63
SPG11-224ENST00000561268 LYRM7Q5U5X0 104 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 SPANXN1Q5VSR9 72 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 IGFL4Q6B9Z1 124 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 LINC00336Q6ZUF6 198 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 CEND1Q8N111 149 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms