RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 OR2D3Q8NGH3 330 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 SAMD10Q9BYL1 202 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 RPP21Q9H633 154 aaKnown RBP4.08□□□□□ -1.76
LRRC28-220ENST00000561253 BIN3Q9NQY0 253 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 OSTCQ9NRP0 149 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 KIF25-AS1Q9Y6Z4 181 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 TRGV2A0A075B6R0 118 aa4.07□□□□□ -1.76
LRRC28-220ENST00000561253 FAM231BA6NCW3 169 aa4.07□□□□□ -1.76
LRRC28-220ENST00000561253 IGHV3-53P01767 116 aa4.07□□□□□ -1.76
LRRC28-220ENST00000561253 CRYBA4P53673 196 aa4.07□□□□□ -1.76
LRRC28-220ENST00000561253 TCTAP57738 103 aa4.07□□□□□ -1.76
LRRC28-220ENST00000561253 RPS20P60866 119 aaKnown RBP4.07□□□□□ -1.76
LRRC28-220ENST00000561253 COMMD7Q86VX2 200 aa4.07□□□□□ -1.76
LRRC28-220ENST00000561253 FER1L6-AS1Q8NA97 138 aa4.07□□□□□ -1.76
LRRC28-220ENST00000561253 SFRP2Q96HF1 295 aa4.07□□□□□ -1.76
LRRC28-220ENST00000561253 Q9UF83 564 aa4.07□□□□□ -1.76
LRRC28-220ENST00000561253 LRP1BQ9NZR2 4599 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 EPPK1P58107 5090 aaKnown RBP4.06□□□□□ -1.76
LRRC28-220ENST00000561253 TRAV26-1A0A087WT03 109 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 MUC21A0A0G2JKD1 596 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 MUC21A0A140T8X8 626 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 A8MWV9 139 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 IGLL5B9A064 214 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 F5H768 121 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 HTN3P15516 51 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 S100A4P26447 101 aaKnown RBP4.06□□□□□ -1.76
LRRC28-220ENST00000561253 LYZL1Q6UWQ5 148 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 ZFP2Q6ZN57 461 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 ZFP82Q8N141 532 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 TSKUQ8WUA8 353 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 PRO0255Q9UI72 69 aa4.06□□□□□ -1.76
LRRC28-220ENST00000561253 CARHSP1Q9Y2V2 147 aaKnown RBP4.06□□□□□ -1.76
LRRC28-220ENST00000561253 KLK5Q9Y337 293 aaPredicted RBP4.06□□□□□ -1.76
LRRC28-220ENST00000561253 A0A096LPF7 62 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 LOC100131303A0A0U1RQF7 123 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 LCE6AA0A183 80 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 TRBV6-4A0A1B0GX49 114 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 SMIM27A0A1W2PRY6 76 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 XKRY2A2RUG3 117 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 HIGD1CA8MV81 97 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 A8MWL6 223 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 F2Z2F3 143 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 M0R381 172 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 GATCO43716 136 aaKnown RBP4.05□□□□□ -1.76
LRRC28-220ENST00000561253 ADIRFQ15847 76 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 SLC25A29Q8N8R3 303 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 OR4C5Q8NGB2 326 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 SEC11CQ9BY50 192 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 HHLA3Q9XRX5 114 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 PHLDA3Q9Y5J5 127 aa4.05□□□□□ -1.76
LRRC28-220ENST00000561253 A0A0J9YY99 117 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 A0A1B0GXF2 115 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 NTF3P20783 257 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 EVI2AP22794 236 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
LRRC28-220ENST00000561253 CACNG7P62955 275 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 SLAQ13239 276 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 RNF212Q495C1 297 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 LGALS9CQ6DKI2 356 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 C14orf178Q8N769 122 aaPredicted RBP4.04□□□□□ -1.76
LRRC28-220ENST00000561253 C15orf53Q8NAA6 179 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 NUP35Q8NFH5 326 aa4.04□□□□□ -1.76
LRRC28-220ENST00000561253 IGHV3-73A0A0B4J1V6 119 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 A0A1B0GUT8 65 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 M0QY20 66 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 P0DMU3 169 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 FAM231AP0DMU4 169 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 FAM231CP0DMU5 169 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 DSCR10P59022 87 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 SPANXN1Q5VSR9 72 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 ATRAIDQ6UW56 229 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 GATD1Q8NB37 220 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 RNF185Q96GF1 192 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 PGLYRP4Q96LB8 373 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 AP1S3Q96PC3 154 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 TPPP3Q9BW30 176 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 LINC00588Q9Y4M8 146 aa4.03□□□□□ -1.76
LRRC28-220ENST00000561253 DNAH8Q96JB1 4490 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 TRGV4A0A0C4DH28 118 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 TRBV10-1A0A0K0K1A3 114 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 F8W036 122 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 RAB4BP61018 213 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 RHOHQ15669 191 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 ESRGQ1W209 222 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 LINC00242Q5T6M2 205 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 SLC7A5P1Q8MH63 180 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 C15orf54Q8N8G6 183 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 ZNRF2Q8NHG8 242 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 UPK3BQ9BT76 320 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 RPS10P5Q9NQ39 176 aa4.02□□□□□ -1.77
LRRC28-220ENST00000561253 A0A087WWC5 75 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 PPP1R2P9O14990 202 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 MT-ND4LP03901 98 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 UBE2D3P61077 147 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 UBE2D2P62837 147 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 MRPL23Q16540 153 aaKnown RBP4.01□□□□□ -1.77
LRRC28-220ENST00000561253 FAM74A4Q5TZK3 123 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 LYPD5Q6UWN5 251 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 Q6ZR54 194 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms