RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
MEIS3-209ENST00000561040 NSD1Q96L73 2696 aaPredicted RBP11.86□□□□□ -0.51
MEIS3-209ENST00000561040 IGHV3-53P01767 116 aa11.86□□□□□ -0.51
MEIS3-209ENST00000561040 PRM2P04554 102 aa11.86□□□□□ -0.51
MEIS3-209ENST00000561040 AZU1P20160 251 aa11.86□□□□□ -0.51
MEIS3-209ENST00000561040 TAL2Q16559 108 aa11.86□□□□□ -0.51
MEIS3-209ENST00000561040 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.86□□□□□ -0.51
MEIS3-209ENST00000561040 MRPL35Q9NZE8 188 aaKnown RBP11.86□□□□□ -0.51
MEIS3-209ENST00000561040 HHLA3Q9XRX5 114 aa11.86□□□□□ -0.51
MEIS3-209ENST00000561040 RPL24P83731 157 aaKnown RBP11.85□□□□□ -0.51
MEIS3-209ENST00000561040 BAALCQ8WXS3 180 aa11.85□□□□□ -0.51
MEIS3-209ENST00000561040 SPATA25Q9BR10 227 aa11.85□□□□□ -0.51
MEIS3-209ENST00000561040 IGIPA6NJ69 53 aa11.84□□□□□ -0.51
MEIS3-209ENST00000561040 GIG44P09565 113 aaPredicted RBP11.84□□□□□ -0.51
MEIS3-209ENST00000561040 RPL35AP18077 110 aaKnown RBP11.84□□□□□ -0.51
MEIS3-209ENST00000561040 DAZ2Q13117 558 aaKnown RBP11.84□□□□□ -0.51
MEIS3-209ENST00000561040 PAPPA-AS1Q5QFB9 102 aa11.84□□□□□ -0.51
MEIS3-209ENST00000561040 NACAE9PAV3 2078 aa11.84□□□□□ -0.51
MEIS3-209ENST00000561040 IGHV3-73A0A0B4J1V6 119 aa11.83□□□□□ -0.51
MEIS3-209ENST00000561040 TSHBP01222 138 aa11.83□□□□□ -0.51
MEIS3-209ENST00000561040 WFDC10AQ9H1F0 79 aa11.83□□□□□ -0.51
MEIS3-209ENST00000561040 SETD2Q9BYW2 2564 aaPredicted RBP11.83□□□□□ -0.52
MEIS3-209ENST00000561040 TRGV1A0A0A0MS02 117 aa11.82□□□□□ -0.52
MEIS3-209ENST00000561040 GAGE12HA6NDE8 117 aa11.82□□□□□ -0.52
MEIS3-209ENST00000561040 ZC2HC1BQ5TFG8 222 aa11.82□□□□□ -0.52
MEIS3-209ENST00000561040 C20orf203Q8NBC4 194 aa11.82□□□□□ -0.52
MEIS3-209ENST00000561040 CSNK1G2-AS1Q8NCQ2 148 aa11.82□□□□□ -0.52
MEIS3-209ENST00000561040 FN1P02751 2386 aaKnown RBP11.82□□□□□ -0.52
MEIS3-209ENST00000561040 PMVKQ15126 192 aa11.81□□□□□ -0.52
MEIS3-209ENST00000561040 RRN3P1Q2M238 152 aa11.81□□□□□ -0.52
MEIS3-209ENST00000561040 RAB37Q96AX2 223 aa11.81□□□□□ -0.52
MEIS3-209ENST00000561040 TM2D2Q9BX73 214 aa11.81□□□□□ -0.52
MEIS3-209ENST00000561040 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
MEIS3-209ENST00000561040 TEX48A0A1B0GUV7 120 aa11.81□□□□□ -0.52
MEIS3-209ENST00000561040 PRSS29PA6NIE9 313 aa11.81□□□□□ -0.52
MEIS3-209ENST00000561040 NMUP48645 174 aa11.81□□□□□ -0.52
MEIS3-209ENST00000561040 C2CD3Q4AC94 2353 aa11.8□□□□□ -0.52
MEIS3-209ENST00000561040 HIVEP1P15822 2718 aa11.79□□□□□ -0.52
MEIS3-209ENST00000561040 TRBV10-1A0A0K0K1A3 114 aa11.79□□□□□ -0.52
MEIS3-209ENST00000561040 RPL39P62891 51 aaKnown RBP11.79□□□□□ -0.52
MEIS3-209ENST00000561040 OVOL2Q9BRP0 275 aa11.79□□□□□ -0.52
MEIS3-209ENST00000561040 E9PLD3 99 aa11.78□□□□□ -0.52
MEIS3-209ENST00000561040 P0DMU3 169 aa11.78□□□□□ -0.52
MEIS3-209ENST00000561040 FAM231AP0DMU4 169 aa11.78□□□□□ -0.52
MEIS3-209ENST00000561040 FAM231CP0DMU5 169 aa11.78□□□□□ -0.52
MEIS3-209ENST00000561040 CHAC1Q9BUX1 264 aa11.78□□□□□ -0.52
MEIS3-209ENST00000561040 VCX2Q9H322 139 aa11.78□□□□□ -0.52
MEIS3-209ENST00000561040 SPANXB1Q9NS25 103 aaPredicted RBP11.78□□□□□ -0.52
MEIS3-209ENST00000561040 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
MEIS3-209ENST00000561040 GCSHP23434 173 aa11.77□□□□□ -0.52
MEIS3-209ENST00000561040 CRYBA4P53673 196 aa11.77□□□□□ -0.52
MEIS3-209ENST00000561040 Q6ZSN1 163 aa11.77□□□□□ -0.52
MEIS3-209ENST00000561040 Q6ZTI0 123 aa11.77□□□□□ -0.52
MEIS3-209ENST00000561040 CEND1Q8N111 149 aa11.77□□□□□ -0.52
MEIS3-209ENST00000561040 NOP10Q9NPE3 64 aaKnown RBP11.77□□□□□ -0.52
MEIS3-209ENST00000561040 GTSF1LQ9H1H1 148 aa11.76□□□□□ -0.53
MEIS3-209ENST00000561040 PLAC8L1A1L4L8 177 aa11.76□□□□□ -0.53
MEIS3-209ENST00000561040 SMAGPQ0VAQ4 97 aa11.76□□□□□ -0.53
MEIS3-209ENST00000561040 WFDC9Q8NEX5 89 aa11.76□□□□□ -0.53
MEIS3-209ENST00000561040 ATP6V0E2Q8NHE4 81 aa11.76□□□□□ -0.53
MEIS3-209ENST00000561040 SMIM9A6NGZ8 99 aa11.75□□□□□ -0.53
MEIS3-209ENST00000561040 K7EQD1 137 aa11.75□□□□□ -0.53
MEIS3-209ENST00000561040 RPL36AP83881 106 aaKnown RBP11.75□□□□□ -0.53
MEIS3-209ENST00000561040 PCP2Q8IVA1 136 aa11.75□□□□□ -0.53
MEIS3-209ENST00000561040 PHLDA1Q8WV24 401 aaPredicted RBP11.75□□□□□ -0.53
MEIS3-209ENST00000561040 RPL36ALQ969Q0 106 aaKnown RBP11.75□□□□□ -0.53
MEIS3-209ENST00000561040 IGKV2D-26A0A0A0MRZ7 120 aa11.74□□□□□ -0.53
MEIS3-209ENST00000561040 WIPF1O43516 503 aa11.74□□□□□ -0.53
MEIS3-209ENST00000561040 CKS1BP61024 79 aa11.74□□□□□ -0.53
MEIS3-209ENST00000561040 HERVK_113P61574 105 aa11.74□□□□□ -0.53
MEIS3-209ENST00000561040 TRBV7-3A0A075B6L6 115 aa11.74□□□□□ -0.53
MEIS3-209ENST00000561040 KIR2DL5BQ8NHK3 375 aa11.74□□□□□ -0.53
MEIS3-209ENST00000561040 DEFB104AQ8WTQ1 72 aa11.74□□□□□ -0.53
MEIS3-209ENST00000561040 ZNF479Q96JC4 524 aa11.74□□□□□ -0.53
MEIS3-209ENST00000561040 NAA38Q9BRA0 125 aaKnown RBP11.74□□□□□ -0.53
MEIS3-209ENST00000561040 SPANXA1Q9NS26 97 aa11.74□□□□□ -0.53
MEIS3-209ENST00000561040 TRGV2A0A075B6R0 118 aa11.73□□□□□ -0.53
MEIS3-209ENST00000561040 IGLL5B9A064 214 aa11.73□□□□□ -0.53
MEIS3-209ENST00000561040 TCTAP57738 103 aa11.73□□□□□ -0.53
MEIS3-209ENST00000561040 OR11H2Q8NH07 326 aa11.73□□□□□ -0.53
MEIS3-209ENST00000561040 IGLV4-69A0A075B6H9 119 aa11.72□□□□□ -0.53
MEIS3-209ENST00000561040 FXYD2P54710 66 aa11.72□□□□□ -0.53
MEIS3-209ENST00000561040 APOC4P55056 127 aa11.72□□□□□ -0.53
MEIS3-209ENST00000561040 GAGE13Q4V321 117 aa11.72□□□□□ -0.53
MEIS3-209ENST00000561040 DAZ4Q86SG3 579 aaKnown RBP11.72□□□□□ -0.53
MEIS3-209ENST00000561040 DAZ3Q9NR90 486 aaKnown RBP11.72□□□□□ -0.53
MEIS3-209ENST00000561040 IGLV4-3A0A075B6K6 122 aa11.72□□□□□ -0.53
MEIS3-209ENST00000561040 NFE4Q86UQ8 179 aa11.72□□□□□ -0.53
MEIS3-209ENST00000561040 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 TRBV6-4A0A1B0GX49 114 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 C11orf86A6NJI1 115 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 GAGE7O76087 117 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 GAGE12FP0CL80 117 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 GAGE12GP0CL81 117 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 GAGE12IP0CL82 117 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 LYRM7Q5U5X0 104 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.54
MEIS3-209ENST00000561040 NHP2Q9NX24 153 aaKnown RBP11.71□□□□□ -0.54
MEIS3-209ENST00000561040 TIMM21Q9BVV7 248 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms