RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 NPSP0C0P6 89 aa12.13□□□□□ -0.47
HDDC3-206ENST00000561036 UBE2D3P61077 147 aa12.13□□□□□ -0.47
HDDC3-206ENST00000561036 UBE2D2P62837 147 aa12.13□□□□□ -0.47
HDDC3-206ENST00000561036 MDFIQ99750 246 aa12.13□□□□□ -0.47
HDDC3-206ENST00000561036 SPART-AS1P0CW21 52 aa12.12□□□□□ -0.47
HDDC3-206ENST00000561036 BAALCQ8WXS3 180 aa12.12□□□□□ -0.47
HDDC3-206ENST00000561036 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
HDDC3-206ENST00000561036 PYGO1Q9Y3Y4 419 aa12.12□□□□□ -0.47
HDDC3-206ENST00000561036 TRRAPQ9Y4A5 3859 aa12.11□□□□□ -0.47
HDDC3-206ENST00000561036 DPM2O94777 84 aa12.11□□□□□ -0.47
HDDC3-206ENST00000561036 RPL39P62891 51 aaKnown RBP12.11□□□□□ -0.47
HDDC3-206ENST00000561036 KPRPQ5T749 579 aaPredicted RBP12.11□□□□□ -0.47
HDDC3-206ENST00000561036 DDTP30046 118 aa12.1□□□□□ -0.47
HDDC3-206ENST00000561036 PAPPA-AS1Q5QFB9 102 aa12.1□□□□□ -0.47
HDDC3-206ENST00000561036 DEFB104AQ8WTQ1 72 aa12.1□□□□□ -0.47
HDDC3-206ENST00000561036 PHLDA1Q8WV24 401 aaPredicted RBP12.1□□□□□ -0.47
HDDC3-206ENST00000561036 CHCHD7Q9BUK0 85 aa12.1□□□□□ -0.47
HDDC3-206ENST00000561036 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
HDDC3-206ENST00000561036 GAGE12JA6NER3 117 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 F8VRH5 84 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 IGKCP01834 107 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 PLNP26678 52 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 CRYBA4P53673 196 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 DAD1P61803 113 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 GAGE1Q13065 139 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 GAGE4Q13068 117 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 GAGE5Q13069 117 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 PMVKQ15126 192 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 MAJINQ3KP22 176 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 GAGE13Q4V321 117 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 MIEN1Q9BRT3 115 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 GTSF1LQ9H1H1 148 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 COL6A5A8TX70 2615 aa12.09□□□□□ -0.47
HDDC3-206ENST00000561036 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
HDDC3-206ENST00000561036 hDV102S1A0JD36 115 aa12.08□□□□□ -0.48
HDDC3-206ENST00000561036 PRSS29PA6NIE9 313 aa12.08□□□□□ -0.48
HDDC3-206ENST00000561036 LINC00694P0DN24 101 aa12.08□□□□□ -0.48
HDDC3-206ENST00000561036 MRPL35Q9NZE8 188 aaKnown RBP12.08□□□□□ -0.48
HDDC3-206ENST00000561036 PRO0255Q9UI72 69 aa12.08□□□□□ -0.48
HDDC3-206ENST00000561036 CHTOPQ9Y3Y2 248 aaKnown RBP12.08□□□□□ -0.48
HDDC3-206ENST00000561036 IGLC3P0DOY3 106 aa12.07□□□□□ -0.48
HDDC3-206ENST00000561036 SMAGPQ0VAQ4 97 aa12.07□□□□□ -0.48
HDDC3-206ENST00000561036 TMEM97Q5BJF2 176 aa12.07□□□□□ -0.48
HDDC3-206ENST00000561036 TIMM21Q9BVV7 248 aa12.07□□□□□ -0.48
HDDC3-206ENST00000561036 CST9LQ9H4G1 147 aa12.07□□□□□ -0.48
HDDC3-206ENST00000561036 UQCR10Q9UDW1 63 aa12.07□□□□□ -0.48
HDDC3-206ENST00000561036 DEFB4AO15263 64 aa12.06□□□□□ -0.48
HDDC3-206ENST00000561036 ATP5G1P05496 136 aa12.06□□□□□ -0.48
HDDC3-206ENST00000561036 C11orf68Q9H3H3 251 aaKnown RBP12.06□□□□□ -0.48
HDDC3-206ENST00000561036 LINC00587B1AMM8 73 aa12.05□□□□□ -0.48
HDDC3-206ENST00000561036 IGLV4-3A0A075B6K6 122 aa12.04□□□□□ -0.48
HDDC3-206ENST00000561036 LOC100131303A0A0U1RQF7 123 aa12.04□□□□□ -0.48
HDDC3-206ENST00000561036 H7C423 109 aa12.04□□□□□ -0.48
HDDC3-206ENST00000561036 CELA1Q9UNI1 258 aa12.04□□□□□ -0.48
HDDC3-206ENST00000561036 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
HDDC3-206ENST00000561036 MRPS36P82909 103 aaKnown RBP12.03□□□□□ -0.48
HDDC3-206ENST00000561036 NTM-AS1Q6ZSK4 140 aa12.03□□□□□ -0.48
HDDC3-206ENST00000561036 VCX2Q9H322 139 aa12.03□□□□□ -0.48
HDDC3-206ENST00000561036 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.02□□□□□ -0.49
HDDC3-206ENST00000561036 IGKV2-29A2NJV5 120 aaPredicted RBP12.02□□□□□ -0.49
HDDC3-206ENST00000561036 PAX4O43316 350 aa12.02□□□□□ -0.49
HDDC3-206ENST00000561036 GYPEP15421 78 aa12.02□□□□□ -0.49
HDDC3-206ENST00000561036 MRPL52Q86TS9 123 aaKnown RBP12.02□□□□□ -0.49
HDDC3-206ENST00000561036 SBSPONQ8IVN8 264 aa12.02□□□□□ -0.49
HDDC3-206ENST00000561036 AMELXQ99217 191 aa12.02□□□□□ -0.49
HDDC3-206ENST00000561036 TMEM243Q9BU79 118 aa12.02□□□□□ -0.49
HDDC3-206ENST00000561036 RETNQ9HD89 108 aa12.02□□□□□ -0.49
HDDC3-206ENST00000561036 CSDC2Q9Y534 153 aaKnown RBP12.02□□□□□ -0.49
HDDC3-206ENST00000561036 K7EIL1 84 aa12.01□□□□□ -0.49
HDDC3-206ENST00000561036 ANKRD39Q53RE8 183 aa12.01□□□□□ -0.49
HDDC3-206ENST00000561036 STPG4Q8N801 248 aa12.01□□□□□ -0.49
HDDC3-206ENST00000561036 C14orf144Q96I85 54 aa12.01□□□□□ -0.49
HDDC3-206ENST00000561036 TRBV25-1A0A075B6N4 114 aa12□□□□□ -0.49
HDDC3-206ENST00000561036 COX8AP10176 69 aa12□□□□□ -0.49
HDDC3-206ENST00000561036 SLC25A34Q6PIV7 304 aa12□□□□□ -0.49
HDDC3-206ENST00000561036 OPRPNQ99935 248 aaPredicted RBP12□□□□□ -0.49
HDDC3-206ENST00000561036 IGLV4-69A0A075B6H9 119 aa11.99□□□□□ -0.49
HDDC3-206ENST00000561036 TRBV6-8A0A0A6YYG3 113 aa11.99□□□□□ -0.49
HDDC3-206ENST00000561036 DEFA6Q01524 100 aa11.99□□□□□ -0.49
HDDC3-206ENST00000561036 ZC2HC1BQ5TFG8 222 aa11.99□□□□□ -0.49
HDDC3-206ENST00000561036 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
HDDC3-206ENST00000561036 ATP6V0E2Q8NHE4 81 aa11.99□□□□□ -0.49
HDDC3-206ENST00000561036 FAM104AQ969W3 186 aa11.99□□□□□ -0.49
HDDC3-206ENST00000561036 SPATA25Q9BR10 227 aa11.99□□□□□ -0.49
HDDC3-206ENST00000561036 CMYA5Q8N3K9 4069 aa11.99□□□□□ -0.49
HDDC3-206ENST00000561036 TRAV26-1A0A087WT03 109 aa11.98□□□□□ -0.49
HDDC3-206ENST00000561036 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
HDDC3-206ENST00000561036 DGAT2L7PQ6IED9 249 aa11.98□□□□□ -0.49
HDDC3-206ENST00000561036 SH2D6Q7Z4S9 175 aa11.98□□□□□ -0.49
HDDC3-206ENST00000561036 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
HDDC3-206ENST00000561036 F5H768 121 aa11.97□□□□□ -0.49
HDDC3-206ENST00000561036 UBE2L6O14933 153 aa11.97□□□□□ -0.49
HDDC3-206ENST00000561036 DLEU1O43261 78 aa11.97□□□□□ -0.49
HDDC3-206ENST00000561036 FGF6P10767 208 aa11.97□□□□□ -0.49
HDDC3-206ENST00000561036 ZNF25P17030 456 aaPredicted RBP11.97□□□□□ -0.49
HDDC3-206ENST00000561036 TM2D3Q9BRN9 247 aa11.97□□□□□ -0.49
HDDC3-206ENST00000561036 C2orf88Q9BSF0 95 aa11.97□□□□□ -0.49
HDDC3-206ENST00000561036 ANK2Q01484 3957 aa11.97□□□□□ -0.49
HDDC3-206ENST00000561036 C11orf86A6NJI1 115 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms