RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 DAZAP1Q96EP5 407 aaKnown RBP7.21□□□□□ -1.25
GABPB1-210ENST00000560825 CHAC1Q9BUX1 264 aa7.21□□□□□ -1.25
GABPB1-210ENST00000560825 CRPP02741 224 aa7.2□□□□□ -1.26
GABPB1-210ENST00000560825 SLPIP03973 132 aa7.2□□□□□ -1.26
GABPB1-210ENST00000560825 HNRNPA3P51991 378 aaKnown RBP7.2□□□□□ -1.26
GABPB1-210ENST00000560825 Q0VG73 95 aa7.2□□□□□ -1.26
GABPB1-210ENST00000560825 ELOBQ15370 118 aa7.2□□□□□ -1.26
GABPB1-210ENST00000560825 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
GABPB1-210ENST00000560825 TRBV25-1A0A075B6N4 114 aa7.19□□□□□ -1.26
GABPB1-210ENST00000560825 RPS20P60866 119 aaKnown RBP7.19□□□□□ -1.26
GABPB1-210ENST00000560825 CACNG7P62955 275 aa7.19□□□□□ -1.26
GABPB1-210ENST00000560825 KCNIP4Q6PIL6 250 aa7.19□□□□□ -1.26
GABPB1-210ENST00000560825 RASL11AQ6T310 242 aa7.19□□□□□ -1.26
GABPB1-210ENST00000560825 SMIM12Q96EX1 92 aa7.19□□□□□ -1.26
GABPB1-210ENST00000560825 RPP21Q9H633 154 aaKnown RBP7.19□□□□□ -1.26
GABPB1-210ENST00000560825 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
GABPB1-210ENST00000560825 IGHV1-24A0A0C4DH33 117 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 REG3AQ06141 175 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 TWIST1Q15672 202 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 MIAQ16674 131 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 EIF5AL1Q6IS14 154 aaKnown RBP7.18□□□□□ -1.26
GABPB1-210ENST00000560825 LYPD6BQ8NI32 183 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 CNFNQ9BYD5 112 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 DPH3P1Q9H4G8 78 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 F2Z2F3 143 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 TEX46H3BTG2 121 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 AKAP14Q86UN6 197 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 NIT2Q9NQR4 276 aa7.18□□□□□ -1.26
GABPB1-210ENST00000560825 CEBPGP53567 150 aa7.17□□□□□ -1.26
GABPB1-210ENST00000560825 PGLYRP4Q96LB8 373 aa7.17□□□□□ -1.26
GABPB1-210ENST00000560825 TMEM243Q9BU79 118 aa7.17□□□□□ -1.26
GABPB1-210ENST00000560825 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.16□□□□□ -1.26
GABPB1-210ENST00000560825 IGKV2-29A2NJV5 120 aaPredicted RBP7.16□□□□□ -1.26
GABPB1-210ENST00000560825 TRGC1P0CF51 173 aa7.16□□□□□ -1.26
GABPB1-210ENST00000560825 SDIM1Q6ZPB5 146 aa7.16□□□□□ -1.26
GABPB1-210ENST00000560825 C9orf163Q8N9P6 203 aa7.16□□□□□ -1.26
GABPB1-210ENST00000560825 H7C1H1 209 aa7.15□□□□□ -1.27
GABPB1-210ENST00000560825 PLA2G1BP04054 148 aaKnown RBP7.15□□□□□ -1.27
GABPB1-210ENST00000560825 CHTF8P0CG12 524 aa7.15□□□□□ -1.27
GABPB1-210ENST00000560825 TMEM97Q5BJF2 176 aa7.15□□□□□ -1.27
GABPB1-210ENST00000560825 C15orf56Q8N910 161 aa7.15□□□□□ -1.27
GABPB1-210ENST00000560825 IGKV3OR2-268A0A0C4DH90 116 aa7.14□□□□□ -1.27
GABPB1-210ENST00000560825 A0A1B0GUV1 79 aa7.14□□□□□ -1.27
GABPB1-210ENST00000560825 XKRY2A2RUG3 117 aa7.14□□□□□ -1.27
GABPB1-210ENST00000560825 FAM231BA6NCW3 169 aa7.14□□□□□ -1.27
GABPB1-210ENST00000560825 C9JQL5 133 aa7.14□□□□□ -1.27
GABPB1-210ENST00000560825 RPS10P46783 165 aaKnown RBP7.14□□□□□ -1.27
GABPB1-210ENST00000560825 AMTP48728 403 aa7.14□□□□□ -1.27
GABPB1-210ENST00000560825 WDR73Q6P4I2 378 aa7.14□□□□□ -1.27
GABPB1-210ENST00000560825 KRTAP29-1A8MX34 341 aaPredicted RBP7.13□□□□□ -1.27
GABPB1-210ENST00000560825 TMEM250H0YL14 139 aa7.13□□□□□ -1.27
GABPB1-210ENST00000560825 GATCO43716 136 aaKnown RBP7.13□□□□□ -1.27
GABPB1-210ENST00000560825 FAM231DQ6ZW35 169 aa7.13□□□□□ -1.27
GABPB1-210ENST00000560825 LINC01551Q86U37 167 aa7.13□□□□□ -1.27
GABPB1-210ENST00000560825 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.13□□□□□ -1.27
GABPB1-210ENST00000560825 RNF185Q96GF1 192 aa7.13□□□□□ -1.27
GABPB1-210ENST00000560825 UBR4Q5T4S7 5183 aa7.12□□□□□ -1.27
GABPB1-210ENST00000560825 hDV102S1A0JD36 115 aa7.12□□□□□ -1.27
GABPB1-210ENST00000560825 GAGE12HA6NDE8 117 aa7.12□□□□□ -1.27
GABPB1-210ENST00000560825 SRP19P09132 144 aaKnown RBP7.12□□□□□ -1.27
GABPB1-210ENST00000560825 SRSF3P84103 164 aaKnown RBP7.12□□□□□ -1.27
GABPB1-210ENST00000560825 COTL1Q14019 142 aa7.12□□□□□ -1.27
GABPB1-210ENST00000560825 C14orf177Q52M58 125 aa7.12□□□□□ -1.27
GABPB1-210ENST00000560825 BIN3Q9NQY0 253 aa7.12□□□□□ -1.27
GABPB1-210ENST00000560825 SDHAF1A6NFY7 115 aa7.11□□□□□ -1.27
GABPB1-210ENST00000560825 SMKR1H3BMG3 65 aa7.11□□□□□ -1.27
GABPB1-210ENST00000560825 TSHBP01222 138 aa7.11□□□□□ -1.27
GABPB1-210ENST00000560825 PKIAP61925 76 aa7.11□□□□□ -1.27
GABPB1-210ENST00000560825 BLOC1S1P78537 153 aa7.11□□□□□ -1.27
GABPB1-210ENST00000560825 DGAT2L7PQ6IED9 249 aa7.11□□□□□ -1.27
GABPB1-210ENST00000560825 FAM210AQ96ND0 272 aa7.11□□□□□ -1.27
GABPB1-210ENST00000560825 NCR2O95944 276 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 TAGLN2P37802 199 aaKnown RBP7.1□□□□□ -1.27
GABPB1-210ENST00000560825 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
GABPB1-210ENST00000560825 CIRBPQ14011 172 aaKnown RBP7.1□□□□□ -1.27
GABPB1-210ENST00000560825 HIGD2BQ4VC39 106 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 LCE1DQ5T752 114 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 AMN1Q8IY45 258 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 LINC00526Q96FQ7 95 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 SMIM7Q9BQ49 75 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 EIF5A2Q9GZV4 153 aaKnown RBP7.1□□□□□ -1.27
GABPB1-210ENST00000560825 V9GYV3 84 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 TNXBP22105 4242 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 TRAV8-4A0A0B4J246 113 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 HIGD1CA8MV81 97 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 UBE2L6O14933 153 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 FGF6P10767 208 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 TMEM242Q9NWH2 141 aa7.1□□□□□ -1.27
GABPB1-210ENST00000560825 A8MWL6 223 aa7.09□□□□□ -1.28
GABPB1-210ENST00000560825 ESDP10768 282 aa7.09□□□□□ -1.28
GABPB1-210ENST00000560825 RAB4AP20338 218 aa7.09□□□□□ -1.28
GABPB1-210ENST00000560825 RPL37AP61513 92 aaKnown RBP7.09□□□□□ -1.28
GABPB1-210ENST00000560825 FOXI1Q12951 378 aa7.09□□□□□ -1.28
GABPB1-210ENST00000560825 RNASEKQ6P5S7 137 aaKnown RBP7.09□□□□□ -1.28
GABPB1-210ENST00000560825 PRSS3P2Q8NHM4 247 aa7.09□□□□□ -1.28
GABPB1-210ENST00000560825 CHCHD10Q8WYQ3 142 aaPredicted RBP7.09□□□□□ -1.28
GABPB1-210ENST00000560825 ZNF727A8MUV8 499 aa7.08□□□□□ -1.28
GABPB1-210ENST00000560825 CT83Q5H943 113 aa7.08□□□□□ -1.28
GABPB1-210ENST00000560825 NUP35Q8NFH5 326 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms