RNA–Protein interactions for RNA: ENST00000560622.5

USP3-AS1-207, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 508 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-207ENST00000560622 NIT2Q9NQR4 276 aa10.14□□□□□ -0.79
USP3-AS1-207ENST00000560622 GNG13Q9P2W3 67 aa10.14□□□□□ -0.79
USP3-AS1-207ENST00000560622 TRAV1-1A0A0B4J248 108 aa10.13□□□□□ -0.79
USP3-AS1-207ENST00000560622 H7C1H1 209 aa10.13□□□□□ -0.79
USP3-AS1-207ENST00000560622 COX6A2Q02221 97 aa10.13□□□□□ -0.79
USP3-AS1-207ENST00000560622 PRSS3P2Q8NHM4 247 aa10.13□□□□□ -0.79
USP3-AS1-207ENST00000560622 GAGE12HA6NDE8 117 aa10.12□□□□□ -0.79
USP3-AS1-207ENST00000560622 NTF3P20783 257 aa10.12□□□□□ -0.79
USP3-AS1-207ENST00000560622 CTRLP40313 264 aa10.12□□□□□ -0.79
USP3-AS1-207ENST00000560622 RPS20P60866 119 aaKnown RBP10.12□□□□□ -0.79
USP3-AS1-207ENST00000560622 GATD1Q8NB37 220 aa10.12□□□□□ -0.79
USP3-AS1-207ENST00000560622 CNFNQ9BYD5 112 aa10.12□□□□□ -0.79
USP3-AS1-207ENST00000560622 DPH3P1Q9H4G8 78 aa10.12□□□□□ -0.79
USP3-AS1-207ENST00000560622 MANBALQ9NQG1 85 aa10.12□□□□□ -0.79
USP3-AS1-207ENST00000560622 PRR3P79522 188 aaKnown RBP10.11□□□□□ -0.79
USP3-AS1-207ENST00000560622 Q6ZNX1 250 aa10.11□□□□□ -0.79
USP3-AS1-207ENST00000560622 C9orf62Q8N4C0 152 aa10.11□□□□□ -0.79
USP3-AS1-207ENST00000560622 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
USP3-AS1-207ENST00000560622 AP5S1Q9NUS5 200 aa10.11□□□□□ -0.79
USP3-AS1-207ENST00000560622 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
USP3-AS1-207ENST00000560622 F2Z2F3 143 aa10.1□□□□□ -0.79
USP3-AS1-207ENST00000560622 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
USP3-AS1-207ENST00000560622 SMIM12Q96EX1 92 aa10.1□□□□□ -0.79
USP3-AS1-207ENST00000560622 TRAV26-2A0A0B4J265 109 aa10.09□□□□□ -0.79
USP3-AS1-207ENST00000560622 AMTP48728 403 aa10.09□□□□□ -0.79
USP3-AS1-207ENST00000560622 RPL39LQ96EH5 51 aaKnown RBP10.09□□□□□ -0.79
USP3-AS1-207ENST00000560622 A0A096LNI7 61 aa10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 GVQW2A0A096LPI5 108 aaPredicted RBP10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 NDUFS6O75380 124 aaKnown RBP10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 TRGC1P0CF51 173 aa10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 RPS10P46783 165 aaKnown RBP10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 GNG4P50150 75 aa10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 FOXA3P55318 350 aaPredicted RBP10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 EIF5AP63241 154 aaKnown RBP10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 FOXI1Q12951 378 aa10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 COTL1Q14019 142 aa10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 WDR73Q6P4I2 378 aa10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 NUDT10Q8NFP7 164 aa10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 CHCHD10Q8WYQ3 142 aaPredicted RBP10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 NUDT11Q96G61 164 aa10.08□□□□□ -0.8
USP3-AS1-207ENST00000560622 K7EN84 100 aa10.07□□□□□ -0.8
USP3-AS1-207ENST00000560622 IFNA1P01562 189 aa10.07□□□□□ -0.8
USP3-AS1-207ENST00000560622 SULT1A2P50226 295 aa10.07□□□□□ -0.8
USP3-AS1-207ENST00000560622 KRTAP10-8P60410 259 aa10.07□□□□□ -0.8
USP3-AS1-207ENST00000560622 MEF2BQ02080 365 aaPredicted RBP10.07□□□□□ -0.8
USP3-AS1-207ENST00000560622 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.06□□□□□ -0.8
USP3-AS1-207ENST00000560622 IGKV2-24A0A0C4DH68 120 aa10.06□□□□□ -0.8
USP3-AS1-207ENST00000560622 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
USP3-AS1-207ENST00000560622 IGKV2-29A2NJV5 120 aaPredicted RBP10.06□□□□□ -0.8
USP3-AS1-207ENST00000560622 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
USP3-AS1-207ENST00000560622 UBE2L6O14933 153 aa10.06□□□□□ -0.8
USP3-AS1-207ENST00000560622 MAJINQ3KP22 176 aa10.06□□□□□ -0.8
USP3-AS1-207ENST00000560622 GTSF1Q8WW33 167 aa10.06□□□□□ -0.8
USP3-AS1-207ENST00000560622 DPH3Q96FX2 82 aa10.06□□□□□ -0.8
USP3-AS1-207ENST00000560622 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
USP3-AS1-207ENST00000560622 STPG4Q8N801 248 aa10.05□□□□□ -0.8
USP3-AS1-207ENST00000560622 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
USP3-AS1-207ENST00000560622 SRSF9Q13242 221 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP3-AS1-207ENST00000560622 C7orf33Q8WU49 177 aa10.04□□□□□ -0.8
USP3-AS1-207ENST00000560622 LINC00526Q96FQ7 95 aa10.04□□□□□ -0.8
USP3-AS1-207ENST00000560622 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
USP3-AS1-207ENST00000560622 MED9Q9NWA0 146 aa10.04□□□□□ -0.8
USP3-AS1-207ENST00000560622 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
USP3-AS1-207ENST00000560622 PDE6DO43924 150 aa10.03□□□□□ -0.8
USP3-AS1-207ENST00000560622 FGF6P10767 208 aa10.03□□□□□ -0.8
USP3-AS1-207ENST00000560622 TWIST1Q15672 202 aa10.03□□□□□ -0.8
USP3-AS1-207ENST00000560622 CFAP161Q6P656 301 aa10.03□□□□□ -0.8
USP3-AS1-207ENST00000560622 LYPD6BQ8NI32 183 aa10.03□□□□□ -0.8
USP3-AS1-207ENST00000560622 NCR2O95944 276 aa10.02□□□□□ -0.81
USP3-AS1-207ENST00000560622 BCL2P10415 239 aa10.02□□□□□ -0.81
USP3-AS1-207ENST00000560622 OCC1Q8TAD7 63 aa10.02□□□□□ -0.81
USP3-AS1-207ENST00000560622 RPP21Q9H633 154 aaKnown RBP10.02□□□□□ -0.81
USP3-AS1-207ENST00000560622 H7C423 109 aa10.01□□□□□ -0.81
USP3-AS1-207ENST00000560622 ESDP10768 282 aa10.01□□□□□ -0.81
USP3-AS1-207ENST00000560622 SDHAF1A6NFY7 115 aa10□□□□□ -0.81
USP3-AS1-207ENST00000560622 TEX46H3BTG2 121 aa10□□□□□ -0.81
USP3-AS1-207ENST00000560622 OR5A1Q8NGJ0 315 aa10□□□□□ -0.81
USP3-AS1-207ENST00000560622 LINC00959A0A1B0GUT2 108 aa9.99□□□□□ -0.81
USP3-AS1-207ENST00000560622 TSHBP01222 138 aa9.99□□□□□ -0.81
USP3-AS1-207ENST00000560622 APCSP02743 223 aa9.99□□□□□ -0.81
USP3-AS1-207ENST00000560622 EIF5AL1Q6IS14 154 aaKnown RBP9.99□□□□□ -0.81
USP3-AS1-207ENST00000560622 RNASEKQ6P5S7 137 aaKnown RBP9.99□□□□□ -0.81
USP3-AS1-207ENST00000560622 TRBV6-5A0A0K0K1A5 114 aa9.98□□□□□ -0.81
USP3-AS1-207ENST00000560622 CCL25O15444 150 aa9.98□□□□□ -0.81
USP3-AS1-207ENST00000560622 XCL1P47992 114 aa9.98□□□□□ -0.81
USP3-AS1-207ENST00000560622 AMMECR1LQ6DCA0 310 aa9.98□□□□□ -0.81
USP3-AS1-207ENST00000560622 SPINK6Q6UWN8 80 aa9.98□□□□□ -0.81
USP3-AS1-207ENST00000560622 BIN3Q9NQY0 253 aa9.98□□□□□ -0.81
USP3-AS1-207ENST00000560622 ZNF25P17030 456 aaPredicted RBP9.97□□□□□ -0.81
USP3-AS1-207ENST00000560622 TCTE3Q8IZS6 198 aa9.96□□□□□ -0.82
USP3-AS1-207ENST00000560622 IGHV1-58A0A0C4DH39 117 aa9.95□□□□□ -0.82
USP3-AS1-207ENST00000560622 I3L3M4 83 aa9.95□□□□□ -0.82
USP3-AS1-207ENST00000560622 POLR2KP53803 58 aaKnown RBP9.95□□□□□ -0.82
USP3-AS1-207ENST00000560622 SLC51BQ86UW2 128 aa9.95□□□□□ -0.82
USP3-AS1-207ENST00000560622 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
USP3-AS1-207ENST00000560622 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
USP3-AS1-207ENST00000560622 TMEM242Q9NWH2 141 aa9.95□□□□□ -0.82
USP3-AS1-207ENST00000560622 MUC2Q02817 5179 aa9.95□□□□□ -0.82
USP3-AS1-207ENST00000560622 MRPL52Q86TS9 123 aaKnown RBP9.94□□□□□ -0.82
USP3-AS1-207ENST00000560622 A0A1W2PNN7 141 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms