RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SULT1A2P50226 295 aa11.19□□□□□ -0.62
TSPAN3-208ENST00000560514 CACNG7P62955 275 aa11.19□□□□□ -0.62
TSPAN3-208ENST00000560514 SPINK6Q6UWN8 80 aa11.19□□□□□ -0.62
TSPAN3-208ENST00000560514 NTM-AS1Q6ZSK4 140 aa11.19□□□□□ -0.62
TSPAN3-208ENST00000560514 IGKV2-24A0A0C4DH68 120 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 MUC21A0A0G2JKD1 596 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 MUC21A0A140T8X8 626 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 C19orf71A6NCJ1 209 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 H7C1H1 209 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 SLPIP03973 132 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 COX6A2Q02221 97 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 CENPWQ5EE01 88 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 FER1L6-AS1Q8NA97 138 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 LYPD6BQ8NI32 183 aa11.18□□□□□ -0.62
TSPAN3-208ENST00000560514 M0QY20 66 aa11.17□□□□□ -0.62
TSPAN3-208ENST00000560514 NDUFS6O75380 124 aaKnown RBP11.17□□□□□ -0.62
TSPAN3-208ENST00000560514 TAGLN2P37802 199 aaKnown RBP11.17□□□□□ -0.62
TSPAN3-208ENST00000560514 GNG4P50150 75 aa11.17□□□□□ -0.62
TSPAN3-208ENST00000560514 MEF2BQ02080 365 aaPredicted RBP11.17□□□□□ -0.62
TSPAN3-208ENST00000560514 STPG4Q8N801 248 aa11.17□□□□□ -0.62
TSPAN3-208ENST00000560514 OR2D3Q8NGH3 330 aa11.17□□□□□ -0.62
TSPAN3-208ENST00000560514 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
TSPAN3-208ENST00000560514 IFNA1P01562 189 aa11.16□□□□□ -0.62
TSPAN3-208ENST00000560514 IQCJQ1A5X6 159 aa11.16□□□□□ -0.62
TSPAN3-208ENST00000560514 CFAP161Q6P656 301 aa11.16□□□□□ -0.62
TSPAN3-208ENST00000560514 TCTE3Q8IZS6 198 aa11.16□□□□□ -0.62
TSPAN3-208ENST00000560514 RAB19A4D1S5 217 aa11.15□□□□□ -0.62
TSPAN3-208ENST00000560514 RPS10P46783 165 aaKnown RBP11.15□□□□□ -0.62
TSPAN3-208ENST00000560514 SSTP61278 116 aa11.15□□□□□ -0.62
TSPAN3-208ENST00000560514 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
TSPAN3-208ENST00000560514 C9orf62Q8N4C0 152 aa11.15□□□□□ -0.62
TSPAN3-208ENST00000560514 MED9Q9NWA0 146 aa11.15□□□□□ -0.62
TSPAN3-208ENST00000560514 TRGC1P0CF51 173 aa11.13□□□□□ -0.63
TSPAN3-208ENST00000560514 A0A1B0GUV1 79 aa11.12□□□□□ -0.63
TSPAN3-208ENST00000560514 BCL2P10415 239 aa11.12□□□□□ -0.63
TSPAN3-208ENST00000560514 RASL11AQ6T310 242 aa11.12□□□□□ -0.63
TSPAN3-208ENST00000560514 C20orf203Q8NBC4 194 aa11.12□□□□□ -0.63
TSPAN3-208ENST00000560514 PRSS3P2Q8NHM4 247 aa11.12□□□□□ -0.63
TSPAN3-208ENST00000560514 TPPP3Q9BW30 176 aa11.12□□□□□ -0.63
TSPAN3-208ENST00000560514 NTF3P20783 257 aa11.11□□□□□ -0.63
TSPAN3-208ENST00000560514 SUMO4Q6EEV6 95 aa11.11□□□□□ -0.63
TSPAN3-208ENST00000560514 LYZL1Q6UWQ5 148 aa11.11□□□□□ -0.63
TSPAN3-208ENST00000560514 PGLYRP4Q96LB8 373 aa11.11□□□□□ -0.63
TSPAN3-208ENST00000560514 NIT2Q9NQR4 276 aa11.11□□□□□ -0.63
TSPAN3-208ENST00000560514 TRBV20OR9-2A0A075B6H5 130 aa11.1□□□□□ -0.63
TSPAN3-208ENST00000560514 UBE2L6O14933 153 aa11.1□□□□□ -0.63
TSPAN3-208ENST00000560514 MGPP08493 103 aa11.1□□□□□ -0.63
TSPAN3-208ENST00000560514 NUDT10Q8NFP7 164 aa11.1□□□□□ -0.63
TSPAN3-208ENST00000560514 NUDT11Q96G61 164 aa11.1□□□□□ -0.63
TSPAN3-208ENST00000560514 TMEM243Q9BU79 118 aa11.1□□□□□ -0.63
TSPAN3-208ENST00000560514 CNFNQ9BYD5 112 aa11.1□□□□□ -0.63
TSPAN3-208ENST00000560514 LINC00474Q9P2X8 69 aa11.1□□□□□ -0.63
TSPAN3-208ENST00000560514 LPAP08519 4548 aa11.09□□□□□ -0.63
TSPAN3-208ENST00000560514 IGLV4-60A0A075B6I1 120 aa11.09□□□□□ -0.63
TSPAN3-208ENST00000560514 HIGD2BQ4VC39 106 aa11.09□□□□□ -0.63
TSPAN3-208ENST00000560514 Q6ZRP5 223 aa11.09□□□□□ -0.63
TSPAN3-208ENST00000560514 FAM231BA6NCW3 169 aa11.08□□□□□ -0.64
TSPAN3-208ENST00000560514 GAGE12HA6NDE8 117 aa11.08□□□□□ -0.64
TSPAN3-208ENST00000560514 C15orf56Q8N910 161 aa11.08□□□□□ -0.64
TSPAN3-208ENST00000560514 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
TSPAN3-208ENST00000560514 CTRLP40313 264 aa11.07□□□□□ -0.64
TSPAN3-208ENST00000560514 NKX2-5P52952 324 aaPredicted RBP11.07□□□□□ -0.64
TSPAN3-208ENST00000560514 KRTAP9-2Q9BYQ4 174 aa11.07□□□□□ -0.64
TSPAN3-208ENST00000560514 GFRA4Q9GZZ7 299 aa11.07□□□□□ -0.64
TSPAN3-208ENST00000560514 SRSF9Q13242 221 aaKnown RBP eCLIP11.06□□□□□ -0.64
TSPAN3-208ENST00000560514 OCC1Q8TAD7 63 aa11.06□□□□□ -0.64
TSPAN3-208ENST00000560514 A0A096LNI7 61 aa11.05□□□□□ -0.64
TSPAN3-208ENST00000560514 IGKV3OR2-268A0A0C4DH90 116 aa11.05□□□□□ -0.64
TSPAN3-208ENST00000560514 A0A0U1RQV1 116 aa11.05□□□□□ -0.64
TSPAN3-208ENST00000560514 TWIST1Q15672 202 aa11.05□□□□□ -0.64
TSPAN3-208ENST00000560514 RPP21Q9H633 154 aaKnown RBP11.05□□□□□ -0.64
TSPAN3-208ENST00000560514 TMEM250H0YL14 139 aa11.04□□□□□ -0.64
TSPAN3-208ENST00000560514 BLOC1S1P78537 153 aa11.04□□□□□ -0.64
TSPAN3-208ENST00000560514 COTL1Q14019 142 aa11.04□□□□□ -0.64
TSPAN3-208ENST00000560514 TEX261Q6UWH6 196 aa11.04□□□□□ -0.64
TSPAN3-208ENST00000560514 Q6ZNX1 250 aa11.03□□□□□ -0.64
TSPAN3-208ENST00000560514 SMIM15Q7Z3B0 74 aa11.03□□□□□ -0.64
TSPAN3-208ENST00000560514 FAM210AQ96ND0 272 aa11.02□□□□□ -0.65
TSPAN3-208ENST00000560514 RNASE7Q9H1E1 156 aaKnown RBP11.02□□□□□ -0.65
TSPAN3-208ENST00000560514 H7C423 109 aa11.01□□□□□ -0.65
TSPAN3-208ENST00000560514 K7EN84 100 aa11.01□□□□□ -0.65
TSPAN3-208ENST00000560514 NCR2O95944 276 aa11.01□□□□□ -0.65
TSPAN3-208ENST00000560514 FOXA3P55318 350 aaPredicted RBP11.01□□□□□ -0.65
TSPAN3-208ENST00000560514 FAM231DQ6ZW35 169 aa11.01□□□□□ -0.65
TSPAN3-208ENST00000560514 ZNF664Q8N3J9 261 aa11.01□□□□□ -0.65
TSPAN3-208ENST00000560514 GATD1Q8NB37 220 aa11.01□□□□□ -0.65
TSPAN3-208ENST00000560514 GVQW2A0A096LPI5 108 aaPredicted RBP11□□□□□ -0.65
TSPAN3-208ENST00000560514 A8MWL6 223 aa11□□□□□ -0.65
TSPAN3-208ENST00000560514 AMTP48728 403 aa11□□□□□ -0.65
TSPAN3-208ENST00000560514 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
TSPAN3-208ENST00000560514 CHCHD10Q8WYQ3 142 aaPredicted RBP10.99□□□□□ -0.65
TSPAN3-208ENST00000560514 GATCO43716 136 aaKnown RBP10.98□□□□□ -0.65
TSPAN3-208ENST00000560514 CT83Q5H943 113 aa10.98□□□□□ -0.65
TSPAN3-208ENST00000560514 AMMECR1LQ6DCA0 310 aa10.98□□□□□ -0.65
TSPAN3-208ENST00000560514 AKAP14Q86UN6 197 aa10.98□□□□□ -0.65
TSPAN3-208ENST00000560514 PSORS1C2Q9UIG4 136 aa10.98□□□□□ -0.65
TSPAN3-208ENST00000560514 CARD19Q96LW7 228 aa10.96□□□□□ -0.65
TSPAN3-208ENST00000560514 TRBV6-5A0A0K0K1A5 114 aa10.95□□□□□ -0.66
TSPAN3-208ENST00000560514 MT-ND6P03923 174 aa10.94□□□□□ -0.66
TSPAN3-208ENST00000560514 RNASEKQ6P5S7 137 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms