RNA–Protein interactions for RNA: ENST00000560498.5

HMG20A-210, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-210ENST00000560498 TMEM243Q9BU79 118 aa10.75□□□□□ -0.69
HMG20A-210ENST00000560498 SERTAD4-AS1Q5TG53 156 aa10.74□□□□□ -0.69
HMG20A-210ENST00000560498 ALKAL2Q6UX46 152 aa10.74□□□□□ -0.69
HMG20A-210ENST00000560498 GTSF1Q8WW33 167 aa10.74□□□□□ -0.69
HMG20A-210ENST00000560498 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
HMG20A-210ENST00000560498 TRAV26-2A0A0B4J265 109 aa10.73□□□□□ -0.69
HMG20A-210ENST00000560498 A0A1B0GUV1 79 aa10.73□□□□□ -0.69
HMG20A-210ENST00000560498 FOXA3P55318 350 aaPredicted RBP10.73□□□□□ -0.69
HMG20A-210ENST00000560498 DGAT2L7PQ6IED9 249 aa10.73□□□□□ -0.69
HMG20A-210ENST00000560498 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
HMG20A-210ENST00000560498 PGLYRP4Q96LB8 373 aa10.73□□□□□ -0.69
HMG20A-210ENST00000560498 hCG_2014768A0A024R1R8 64 aa10.72□□□□□ -0.69
HMG20A-210ENST00000560498 AKAP14Q86UN6 197 aa10.72□□□□□ -0.69
HMG20A-210ENST00000560498 C9orf163Q8N9P6 203 aa10.72□□□□□ -0.69
HMG20A-210ENST00000560498 PANO1I0J062 215 aa10.7□□□□□ -0.7
HMG20A-210ENST00000560498 AMTP48728 403 aa10.7□□□□□ -0.7
HMG20A-210ENST00000560498 BLOC1S1P78537 153 aa10.7□□□□□ -0.7
HMG20A-210ENST00000560498 COTL1Q14019 142 aa10.7□□□□□ -0.7
HMG20A-210ENST00000560498 LYPD6BQ8NI32 183 aa10.7□□□□□ -0.7
HMG20A-210ENST00000560498 RPL39LQ96EH5 51 aaKnown RBP10.7□□□□□ -0.7
HMG20A-210ENST00000560498 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.7□□□□□ -0.7
HMG20A-210ENST00000560498 TRAV8-4A0A0B4J246 113 aa10.69□□□□□ -0.7
HMG20A-210ENST00000560498 KRTAP29-1A8MX34 341 aaPredicted RBP10.69□□□□□ -0.7
HMG20A-210ENST00000560498 TMEM250H0YL14 139 aa10.69□□□□□ -0.7
HMG20A-210ENST00000560498 UBE2L6O14933 153 aa10.69□□□□□ -0.7
HMG20A-210ENST00000560498 GATCO43716 136 aaKnown RBP10.69□□□□□ -0.7
HMG20A-210ENST00000560498 SDIM1Q6ZPB5 146 aa10.69□□□□□ -0.7
HMG20A-210ENST00000560498 SLPIP03973 132 aa10.68□□□□□ -0.7
HMG20A-210ENST00000560498 CEBPGP53567 150 aa10.68□□□□□ -0.7
HMG20A-210ENST00000560498 CLRN3Q8NCR9 226 aa10.68□□□□□ -0.7
HMG20A-210ENST00000560498 FAM231DQ6ZW35 169 aa10.67□□□□□ -0.7
HMG20A-210ENST00000560498 PLA2G2DQ9UNK4 145 aa10.67□□□□□ -0.7
HMG20A-210ENST00000560498 hDV102S1A0JD36 115 aa10.66□□□□□ -0.7
HMG20A-210ENST00000560498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.65□□□□□ -0.7
HMG20A-210ENST00000560498 IGKV3OR2-268A0A0C4DH90 116 aa10.65□□□□□ -0.7
HMG20A-210ENST00000560498 IGKV2-29A2NJV5 120 aaPredicted RBP10.65□□□□□ -0.7
HMG20A-210ENST00000560498 A8MWL6 223 aa10.65□□□□□ -0.7
HMG20A-210ENST00000560498 GAS8-AS1O95177 125 aa10.65□□□□□ -0.7
HMG20A-210ENST00000560498 CNBPP62633 177 aaKnown RBP10.65□□□□□ -0.7
HMG20A-210ENST00000560498 SMIM15Q7Z3B0 74 aa10.65□□□□□ -0.7
HMG20A-210ENST00000560498 LRP1Q07954 4544 aaKnown RBP10.65□□□□□ -0.71
HMG20A-210ENST00000560498 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
HMG20A-210ENST00000560498 SDHAF1A6NFY7 115 aa10.64□□□□□ -0.71
HMG20A-210ENST00000560498 RPL37AP61513 92 aaKnown RBP10.63□□□□□ -0.71
HMG20A-210ENST00000560498 EIF5A2Q9GZV4 153 aaKnown RBP10.63□□□□□ -0.71
HMG20A-210ENST00000560498 PKHD1L1Q86WI1 4243 aa10.63□□□□□ -0.71
HMG20A-210ENST00000560498 FAM231BA6NCW3 169 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 NCR2O95944 276 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 APCSP02743 223 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 HNRNPA3P51991 378 aaKnown RBP10.62□□□□□ -0.71
HMG20A-210ENST00000560498 CT83Q5H943 113 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 AMMECR1LQ6DCA0 310 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 RNASEKQ6P5S7 137 aaKnown RBP10.62□□□□□ -0.71
HMG20A-210ENST00000560498 TEX261Q6UWH6 196 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 LINC01551Q86U37 167 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 C15orf56Q8N910 161 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 SMIM7Q9BQ49 75 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 AP5S1Q9NUS5 200 aa10.62□□□□□ -0.71
HMG20A-210ENST00000560498 SRP19P09132 144 aaKnown RBP10.61□□□□□ -0.71
HMG20A-210ENST00000560498 FGF6P10767 208 aa10.61□□□□□ -0.71
HMG20A-210ENST00000560498 FAM210AQ96ND0 272 aa10.61□□□□□ -0.71
HMG20A-210ENST00000560498 FAT3Q8TDW7 4589 aa10.61□□□□□ -0.71
HMG20A-210ENST00000560498 TRBV6-5A0A0K0K1A5 114 aa10.6□□□□□ -0.71
HMG20A-210ENST00000560498 HIGD1CA8MV81 97 aa10.6□□□□□ -0.71
HMG20A-210ENST00000560498 I3L3M4 83 aa10.6□□□□□ -0.71
HMG20A-210ENST00000560498 CHTF8P0CG12 524 aa10.6□□□□□ -0.71
HMG20A-210ENST00000560498 PMCHP20382 165 aa10.6□□□□□ -0.71
HMG20A-210ENST00000560498 CIRBPQ14011 172 aaKnown RBP10.6□□□□□ -0.71
HMG20A-210ENST00000560498 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
HMG20A-210ENST00000560498 CHCHD10Q8WYQ3 142 aaPredicted RBP10.6□□□□□ -0.71
HMG20A-210ENST00000560498 RNF185Q96GF1 192 aa10.6□□□□□ -0.71
HMG20A-210ENST00000560498 KRTAP3-3Q9BYR6 98 aa10.6□□□□□ -0.71
HMG20A-210ENST00000560498 KRTAP3-2Q9BYR7 98 aa10.6□□□□□ -0.71
HMG20A-210ENST00000560498 IGHV3-64A0A075B6Q5 118 aa10.59□□□□□ -0.71
HMG20A-210ENST00000560498 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
HMG20A-210ENST00000560498 H7C423 109 aa10.59□□□□□ -0.71
HMG20A-210ENST00000560498 HIGD2BQ4VC39 106 aa10.59□□□□□ -0.71
HMG20A-210ENST00000560498 OSTCQ9NRP0 149 aa10.59□□□□□ -0.71
HMG20A-210ENST00000560498 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.58□□□□□ -0.72
HMG20A-210ENST00000560498 A0A1B0GUT8 65 aa10.58□□□□□ -0.72
HMG20A-210ENST00000560498 A0A1B0GVG6 124 aa10.58□□□□□ -0.72
HMG20A-210ENST00000560498 NDUFS6O75380 124 aaKnown RBP10.58□□□□□ -0.72
HMG20A-210ENST00000560498 OXTP01178 125 aa10.58□□□□□ -0.72
HMG20A-210ENST00000560498 TSHBP01222 138 aa10.58□□□□□ -0.72
HMG20A-210ENST00000560498 RAB4AP20338 218 aa10.58□□□□□ -0.72
HMG20A-210ENST00000560498 RPS10P46783 165 aaKnown RBP10.58□□□□□ -0.72
HMG20A-210ENST00000560498 BORCS7Q96B45 105 aa10.58□□□□□ -0.72
HMG20A-210ENST00000560498 DPH3Q96FX2 82 aa10.58□□□□□ -0.72
HMG20A-210ENST00000560498 TMEM191AQ9H0A3 160 aa10.58□□□□□ -0.72
HMG20A-210ENST00000560498 ST20Q9HBF5 79 aa10.58□□□□□ -0.72
HMG20A-210ENST00000560498 ESDP10768 282 aa10.57□□□□□ -0.72
HMG20A-210ENST00000560498 CFAP161Q6P656 301 aa10.57□□□□□ -0.72
HMG20A-210ENST00000560498 TMEM242Q9NWH2 141 aa10.57□□□□□ -0.72
HMG20A-210ENST00000560498 V9GYV3 84 aa10.57□□□□□ -0.72
HMG20A-210ENST00000560498 A0A087WYN8 130 aa10.56□□□□□ -0.72
HMG20A-210ENST00000560498 POLR2KP53803 58 aaKnown RBP10.56□□□□□ -0.72
HMG20A-210ENST00000560498 FOXI1Q12951 378 aa10.56□□□□□ -0.72
HMG20A-210ENST00000560498 AMN1Q8IY45 258 aa10.56□□□□□ -0.72
HMG20A-210ENST00000560498 RNF213Q63HN8 5207 aa10.56□□□□□ -0.72
HMG20A-210ENST00000560498 SMKR1H3BMG3 65 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms