RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 DEFB104AQ8WTQ1 72 aa9.68□□□□□ -0.86
IDH3A-219ENST00000560414 GTSF1Q8WW33 167 aa9.68□□□□□ -0.86
IDH3A-219ENST00000560414 EIF5A2Q9GZV4 153 aaKnown RBP9.68□□□□□ -0.86
IDH3A-219ENST00000560414 DNAH8Q96JB1 4490 aa9.67□□□□□ -0.86
IDH3A-219ENST00000560414 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
IDH3A-219ENST00000560414 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.67□□□□□ -0.86
IDH3A-219ENST00000560414 EPM2AB3EWF7 344 aa9.67□□□□□ -0.86
IDH3A-219ENST00000560414 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
IDH3A-219ENST00000560414 Q0VG73 95 aa9.67□□□□□ -0.86
IDH3A-219ENST00000560414 CNFNQ9BYD5 112 aa9.67□□□□□ -0.86
IDH3A-219ENST00000560414 FAM30AQ9NZY2 134 aa9.67□□□□□ -0.86
IDH3A-219ENST00000560414 GATCO43716 136 aaKnown RBP9.66□□□□□ -0.86
IDH3A-219ENST00000560414 CRPP02741 224 aa9.66□□□□□ -0.86
IDH3A-219ENST00000560414 RBX1P62877 108 aa9.66□□□□□ -0.86
IDH3A-219ENST00000560414 IQCJQ1A5X6 159 aa9.66□□□□□ -0.86
IDH3A-219ENST00000560414 IGHV1-24A0A0C4DH33 117 aa9.65□□□□□ -0.86
IDH3A-219ENST00000560414 KRTAP9-6A0A140TA67 174 aa9.65□□□□□ -0.86
IDH3A-219ENST00000560414 FOXA3P55318 350 aaPredicted RBP9.65□□□□□ -0.86
IDH3A-219ENST00000560414 LINC01620Q4KN68 170 aa9.65□□□□□ -0.86
IDH3A-219ENST00000560414 CLPSL2Q6UWE3 100 aa9.65□□□□□ -0.86
IDH3A-219ENST00000560414 FAM210AQ96ND0 272 aa9.65□□□□□ -0.86
IDH3A-219ENST00000560414 SMIM7Q9BQ49 75 aa9.65□□□□□ -0.86
IDH3A-219ENST00000560414 TMEM70Q9BUB7 260 aa9.65□□□□□ -0.86
IDH3A-219ENST00000560414 C1orf43Q9BWL3 253 aa9.65□□□□□ -0.86
IDH3A-219ENST00000560414 NIT2Q9NQR4 276 aa9.65□□□□□ -0.86
IDH3A-219ENST00000560414 TRAV26-2A0A0B4J265 109 aa9.64□□□□□ -0.87
IDH3A-219ENST00000560414 PKIAP61925 76 aa9.64□□□□□ -0.87
IDH3A-219ENST00000560414 FAM231DQ6ZW35 169 aa9.64□□□□□ -0.87
IDH3A-219ENST00000560414 GATD1Q8NB37 220 aa9.64□□□□□ -0.87
IDH3A-219ENST00000560414 PGLYRP4Q96LB8 373 aa9.64□□□□□ -0.87
IDH3A-219ENST00000560414 A8MWL6 223 aa9.63□□□□□ -0.87
IDH3A-219ENST00000560414 SRP19P09132 144 aaKnown RBP9.63□□□□□ -0.87
IDH3A-219ENST00000560414 Q5VSD8 79 aa9.63□□□□□ -0.87
IDH3A-219ENST00000560414 LINC01551Q86U37 167 aa9.63□□□□□ -0.87
IDH3A-219ENST00000560414 LINC00269Q8N2A0 174 aa9.63□□□□□ -0.87
IDH3A-219ENST00000560414 ZNF727A8MUV8 499 aa9.62□□□□□ -0.87
IDH3A-219ENST00000560414 FRZBQ92765 325 aa9.62□□□□□ -0.87
IDH3A-219ENST00000560414 TMEM243Q9BU79 118 aa9.62□□□□□ -0.87
IDH3A-219ENST00000560414 PRR34Q9NV39 138 aa9.62□□□□□ -0.87
IDH3A-219ENST00000560414 HLA-DQA1P01909 254 aa9.61□□□□□ -0.87
IDH3A-219ENST00000560414 MIAQ16674 131 aa9.61□□□□□ -0.87
IDH3A-219ENST00000560414 SMIM15Q7Z3B0 74 aa9.61□□□□□ -0.87
IDH3A-219ENST00000560414 RPL39LQ96EH5 51 aaKnown RBP9.61□□□□□ -0.87
IDH3A-219ENST00000560414 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
IDH3A-219ENST00000560414 NDUFS6O75380 124 aaKnown RBP9.6□□□□□ -0.87
IDH3A-219ENST00000560414 COTL1Q14019 142 aa9.6□□□□□ -0.87
IDH3A-219ENST00000560414 C20orf203Q8NBC4 194 aa9.6□□□□□ -0.87
IDH3A-219ENST00000560414 C9JQL5 133 aa9.59□□□□□ -0.87
IDH3A-219ENST00000560414 USP17L23D6RBM5 183 aa9.59□□□□□ -0.87
IDH3A-219ENST00000560414 AMTP48728 403 aa9.59□□□□□ -0.87
IDH3A-219ENST00000560414 REG3AQ06141 175 aa9.59□□□□□ -0.87
IDH3A-219ENST00000560414 KRTAP26-1Q6PEX3 210 aa9.59□□□□□ -0.87
IDH3A-219ENST00000560414 Q6ZSA8 131 aa9.59□□□□□ -0.87
IDH3A-219ENST00000560414 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
IDH3A-219ENST00000560414 OSTCQ9NRP0 149 aa9.59□□□□□ -0.87
IDH3A-219ENST00000560414 IGLV10-54A0A075B6I4 117 aa9.58□□□□□ -0.88
IDH3A-219ENST00000560414 HIGD1CA8MV81 97 aa9.58□□□□□ -0.88
IDH3A-219ENST00000560414 INAFM2P0DMQ5 153 aa9.58□□□□□ -0.88
IDH3A-219ENST00000560414 TSKUQ8WUA8 353 aa9.58□□□□□ -0.88
IDH3A-219ENST00000560414 VPS13BQ7Z7G8 4022 aa9.58□□□□□ -0.88
IDH3A-219ENST00000560414 A0A1B0GUV1 79 aa9.57□□□□□ -0.88
IDH3A-219ENST00000560414 UBE2L6O14933 153 aa9.57□□□□□ -0.88
IDH3A-219ENST00000560414 GAS8-AS1O95177 125 aa9.57□□□□□ -0.88
IDH3A-219ENST00000560414 C14orf177Q52M58 125 aa9.57□□□□□ -0.88
IDH3A-219ENST00000560414 BORCS7Q96B45 105 aa9.57□□□□□ -0.88
IDH3A-219ENST00000560414 A0A1B0GUT8 65 aa9.56□□□□□ -0.88
IDH3A-219ENST00000560414 TMEM241Q24JQ0 296 aa9.56□□□□□ -0.88
IDH3A-219ENST00000560414 TEX261Q6UWH6 196 aa9.56□□□□□ -0.88
IDH3A-219ENST00000560414 ISOC2Q96AB3 205 aa9.56□□□□□ -0.88
IDH3A-219ENST00000560414 V9GYV3 84 aa9.56□□□□□ -0.88
IDH3A-219ENST00000560414 SDHAF1A6NFY7 115 aa9.55□□□□□ -0.88
IDH3A-219ENST00000560414 PRSS1P07477 247 aa9.55□□□□□ -0.88
IDH3A-219ENST00000560414 RPL23P62829 140 aaKnown RBP9.55□□□□□ -0.88
IDH3A-219ENST00000560414 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.54□□□□□ -0.88
IDH3A-219ENST00000560414 IGKV2-29A2NJV5 120 aaPredicted RBP9.54□□□□□ -0.88
IDH3A-219ENST00000560414 B5MCH6 92 aa9.54□□□□□ -0.88
IDH3A-219ENST00000560414 ADIRFQ15847 76 aa9.54□□□□□ -0.88
IDH3A-219ENST00000560414 FAM74A3Q4VXF1 159 aa9.54□□□□□ -0.88
IDH3A-219ENST00000560414 NUP35Q8NFH5 326 aa9.54□□□□□ -0.88
IDH3A-219ENST00000560414 RNF185Q96GF1 192 aa9.54□□□□□ -0.88
IDH3A-219ENST00000560414 TMEM191AQ9H0A3 160 aa9.54□□□□□ -0.88
IDH3A-219ENST00000560414 SRRM2Q9UQ35 2752 aaKnown RBP9.53□□□□□ -0.88
IDH3A-219ENST00000560414 TRAV8-4A0A0B4J246 113 aa9.53□□□□□ -0.88
IDH3A-219ENST00000560414 FAM231BA6NCW3 169 aa9.53□□□□□ -0.88
IDH3A-219ENST00000560414 APCSP02743 223 aa9.53□□□□□ -0.88
IDH3A-219ENST00000560414 PEA15Q15121 130 aa9.53□□□□□ -0.88
IDH3A-219ENST00000560414 SCXQ7RTU7 201 aa9.53□□□□□ -0.88
IDH3A-219ENST00000560414 AMN1Q8IY45 258 aa9.53□□□□□ -0.88
IDH3A-219ENST00000560414 IGKV3OR2-268A0A0C4DH90 116 aa9.52□□□□□ -0.89
IDH3A-219ENST00000560414 TRBV6-5A0A0K0K1A5 114 aa9.52□□□□□ -0.89
IDH3A-219ENST00000560414 NCR2O95944 276 aa9.52□□□□□ -0.89
IDH3A-219ENST00000560414 RAB4AP20338 218 aa9.52□□□□□ -0.89
IDH3A-219ENST00000560414 PMCHP20382 165 aa9.52□□□□□ -0.89
IDH3A-219ENST00000560414 RPS10P46783 165 aaKnown RBP9.52□□□□□ -0.89
IDH3A-219ENST00000560414 LCE3BQ5TA77 95 aa9.52□□□□□ -0.89
IDH3A-219ENST00000560414 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
IDH3A-219ENST00000560414 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.89
IDH3A-219ENST00000560414 I3L3M4 83 aa9.51□□□□□ -0.89
IDH3A-219ENST00000560414 RIGQ13278 110 aa9.51□□□□□ -0.89
IDH3A-219ENST00000560414 AMMECR1LQ6DCA0 310 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms