RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 DNAH5Q8TE73 4624 aa9.38□□□□□ -0.91
SMAD3-214ENST00000560402 A0A0J9YY99 117 aa9.38□□□□□ -0.91
SMAD3-214ENST00000560402 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
SMAD3-214ENST00000560402 K7EMI3 77 aa9.38□□□□□ -0.91
SMAD3-214ENST00000560402 HBDP02042 147 aa9.38□□□□□ -0.91
SMAD3-214ENST00000560402 IFI27P40305 119 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-214ENST00000560402 Q8N8P6 123 aa9.38□□□□□ -0.91
SMAD3-214ENST00000560402 URB1-AS1Q96HZ7 61 aa9.38□□□□□ -0.91
SMAD3-214ENST00000560402 C20orf78Q9BR46 151 aa9.38□□□□□ -0.91
SMAD3-214ENST00000560402 C3orf79P0CE67 100 aa9.37□□□□□ -0.91
SMAD3-214ENST00000560402 G0S2P27469 103 aa9.37□□□□□ -0.91
SMAD3-214ENST00000560402 PIK3CD-AS1Q5SR53 167 aa9.37□□□□□ -0.91
SMAD3-214ENST00000560402 C14orf178Q8N769 122 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-214ENST00000560402 VAMP8Q9BV40 100 aa9.37□□□□□ -0.91
SMAD3-214ENST00000560402 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
SMAD3-214ENST00000560402 APOBP04114 4563 aaKnown RBP9.37□□□□□ -0.91
SMAD3-214ENST00000560402 TRGV2A0A075B6R0 118 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 PRSS47A8MTI9 375 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 ESRGQ1W209 222 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 PET117Q6UWS5 81 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 Q6ZTI0 123 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 SPATA12Q7Z6I5 190 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 MAPKAPK5-AS1Q8N8E1 139 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 C11orf72Q8NBR9 251 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 SPXQ9BT56 116 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 KRTAP4-5Q9BYR2 181 aa9.36□□□□□ -0.91
SMAD3-214ENST00000560402 F5H697 171 aa9.35□□□□□ -0.91
SMAD3-214ENST00000560402 H7C1H1 209 aa9.35□□□□□ -0.91
SMAD3-214ENST00000560402 ZNF876PQ49A33 203 aa9.35□□□□□ -0.91
SMAD3-214ENST00000560402 TEX43Q6ZNM6 134 aa9.35□□□□□ -0.91
SMAD3-214ENST00000560402 PTH2Q96A98 100 aa9.35□□□□□ -0.91
SMAD3-214ENST00000560402 A0A096LPF7 62 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 TRGV1A0A0A0MS02 117 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 LINC01546A6NGU7 62 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 LINC01549A6NIU2 74 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 A8MWV9 139 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 M0R2P5 195 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 SUMO2P61956 95 aaKnown RBP9.34□□□□□ -0.91
SMAD3-214ENST00000560402 ZNF56Q15929 161 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 ORMDL2Q53FV1 153 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 NRACQ8N912 160 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 SMIM2Q9BVW6 85 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 ST20Q9HBF5 79 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 MDFICQ9P1T7 246 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 ICOSQ9Y6W8 199 aa9.34□□□□□ -0.91
SMAD3-214ENST00000560402 HSBP1L1C9JCN9 74 aa9.33□□□□□ -0.92
SMAD3-214ENST00000560402 SYS1-DBNDD2H3BUS1 97 aa9.33□□□□□ -0.92
SMAD3-214ENST00000560402 RHODO00212 210 aa9.33□□□□□ -0.92
SMAD3-214ENST00000560402 TCAPO15273 167 aa9.33□□□□□ -0.92
SMAD3-214ENST00000560402 FCER1GP30273 86 aa9.33□□□□□ -0.92
SMAD3-214ENST00000560402 LAGE3Q14657 143 aa9.33□□□□□ -0.92
SMAD3-214ENST00000560402 Q8N1X5 172 aa9.33□□□□□ -0.92
SMAD3-214ENST00000560402 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
SMAD3-214ENST00000560402 SIVA1O15304 175 aa9.32□□□□□ -0.92
SMAD3-214ENST00000560402 ATP5LO75964 103 aa9.32□□□□□ -0.92
SMAD3-214ENST00000560402 LINC00315P59091 139 aa9.32□□□□□ -0.92
SMAD3-214ENST00000560402 RPL32P62910 135 aaKnown RBP9.32□□□□□ -0.92
SMAD3-214ENST00000560402 FAM74A4Q5TZK3 123 aa9.31□□□□□ -0.92
SMAD3-214ENST00000560402 CDPF1Q6NVV7 123 aa9.31□□□□□ -0.92
SMAD3-214ENST00000560402 PRO0255Q9UI72 69 aa9.31□□□□□ -0.92
SMAD3-214ENST00000560402 KIF25-AS1Q9Y6Z4 181 aa9.31□□□□□ -0.92
SMAD3-214ENST00000560402 A0A087WWL8 130 aa9.3□□□□□ -0.92
SMAD3-214ENST00000560402 PAX4O43316 350 aa9.3□□□□□ -0.92
SMAD3-214ENST00000560402 GATA1P15976 413 aaPredicted RBP9.3□□□□□ -0.92
SMAD3-214ENST00000560402 SUMO4Q6EEV6 95 aa9.3□□□□□ -0.92
SMAD3-214ENST00000560402 RASL10AQ92737 203 aa9.3□□□□□ -0.92
SMAD3-214ENST00000560402 IFI27L1Q96BM0 104 aa9.3□□□□□ -0.92
SMAD3-214ENST00000560402 KIR2DL4Q99706 377 aa9.3□□□□□ -0.92
SMAD3-214ENST00000560402 VCYO14598 125 aa9.29□□□□□ -0.92
SMAD3-214ENST00000560402 EREGO14944 169 aa9.29□□□□□ -0.92
SMAD3-214ENST00000560402 KRTAP10-2P60368 255 aa9.29□□□□□ -0.92
SMAD3-214ENST00000560402 Q6ZRN7 208 aaPredicted RBP9.29□□□□□ -0.92
SMAD3-214ENST00000560402 ZNF664Q8N3J9 261 aa9.29□□□□□ -0.92
SMAD3-214ENST00000560402 PRO1933Q9H354 126 aa9.29□□□□□ -0.92
SMAD3-214ENST00000560402 PAM16Q9Y3D7 125 aa9.29□□□□□ -0.92
SMAD3-214ENST00000560402 TRAV9-2A0A087WT02 112 aa9.28□□□□□ -0.92
SMAD3-214ENST00000560402 TRBV6-5A0A0K0K1A5 114 aa9.28□□□□□ -0.92
SMAD3-214ENST00000560402 K7EP13 123 aa9.28□□□□□ -0.92
SMAD3-214ENST00000560402 DDTP30046 118 aa9.28□□□□□ -0.92
SMAD3-214ENST00000560402 CRYBA4P53673 196 aa9.28□□□□□ -0.92
SMAD3-214ENST00000560402 MRPL23Q16540 153 aaKnown RBP9.28□□□□□ -0.92
SMAD3-214ENST00000560402 NFE4Q86UQ8 179 aa9.28□□□□□ -0.92
SMAD3-214ENST00000560402 Q8N976 141 aa9.28□□□□□ -0.92
SMAD3-214ENST00000560402 MRPL16Q9NX20 251 aaKnown RBP9.28□□□□□ -0.92
SMAD3-214ENST00000560402 H0Y8G0 127 aa9.27□□□□□ -0.93
SMAD3-214ENST00000560402 GAS8-AS1O95177 125 aa9.27□□□□□ -0.93
SMAD3-214ENST00000560402 CRYGDP07320 174 aa9.27□□□□□ -0.93
SMAD3-214ENST00000560402 SPATA45Q537H7 98 aa9.27□□□□□ -0.93
SMAD3-214ENST00000560402 LINC01545Q5VT33 79 aa9.27□□□□□ -0.93
SMAD3-214ENST00000560402 RPL39LQ96EH5 51 aaKnown RBP9.27□□□□□ -0.93
SMAD3-214ENST00000560402 A0A096LNJ9 63 aa9.26□□□□□ -0.93
SMAD3-214ENST00000560402 NEGR1Q7Z3B1 354 aa9.26□□□□□ -0.93
SMAD3-214ENST00000560402 JPT2Q9H910 190 aa9.26□□□□□ -0.93
SMAD3-214ENST00000560402 PGPEP1Q9NXJ5 209 aa9.26□□□□□ -0.93
SMAD3-214ENST00000560402 HHLA3Q9XRX5 114 aa9.26□□□□□ -0.93
SMAD3-214ENST00000560402 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.25□□□□□ -0.93
SMAD3-214ENST00000560402 CIDEAO60543 219 aa9.25□□□□□ -0.93
SMAD3-214ENST00000560402 IGHV3-53P01767 116 aa9.25□□□□□ -0.93
SMAD3-214ENST00000560402 PRSS1P07477 247 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms