RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 HILS1P60008 231 aa10.25□□□□□ -0.77
TRAF3-208ENST00000560371 A0A1B0GX51 115 aa10.24□□□□□ -0.77
TRAF3-208ENST00000560371 CFC1BP0CG36 223 aa10.24□□□□□ -0.77
TRAF3-208ENST00000560371 CFC1P0CG37 223 aa10.24□□□□□ -0.77
TRAF3-208ENST00000560371 LINC01545Q5VT33 79 aa10.24□□□□□ -0.77
TRAF3-208ENST00000560371 OPRPNQ99935 248 aaPredicted RBP10.24□□□□□ -0.77
TRAF3-208ENST00000560371 FSTL3O95633 263 aa10.24□□□□□ -0.77
TRAF3-208ENST00000560371 MUC22E2RYF6 1773 aaPredicted RBP10.24□□□□□ -0.77
TRAF3-208ENST00000560371 LY6G6DO95868 133 aa10.24□□□□□ -0.77
TRAF3-208ENST00000560371 CCDC140Q96MF4 163 aa10.24□□□□□ -0.77
TRAF3-208ENST00000560371 LINC00574Q9H8X3 128 aa10.24□□□□□ -0.77
TRAF3-208ENST00000560371 CXCL5P42830 114 aa10.23□□□□□ -0.77
TRAF3-208ENST00000560371 CTRLP40313 264 aa10.23□□□□□ -0.77
TRAF3-208ENST00000560371 C14orf177Q52M58 125 aa10.23□□□□□ -0.77
TRAF3-208ENST00000560371 Q6ZVH6 145 aa10.23□□□□□ -0.77
TRAF3-208ENST00000560371 SMIM9A6NGZ8 99 aa10.23□□□□□ -0.77
TRAF3-208ENST00000560371 DEFB114Q30KQ6 69 aa10.23□□□□□ -0.77
TRAF3-208ENST00000560371 FAM222AQ5U5X8 452 aa10.22□□□□□ -0.77
TRAF3-208ENST00000560371 NCR3O14931 201 aa10.22□□□□□ -0.77
TRAF3-208ENST00000560371 DEFB131BA0A096LNP1 70 aa10.22□□□□□ -0.77
TRAF3-208ENST00000560371 LGALS9O00182 355 aa10.22□□□□□ -0.77
TRAF3-208ENST00000560371 H0YGX0 51 aa10.21□□□□□ -0.77
TRAF3-208ENST00000560371 DNAH12Q6ZR08 3092 aa10.21□□□□□ -0.77
TRAF3-208ENST00000560371 CCL25O15444 150 aa10.21□□□□□ -0.78
TRAF3-208ENST00000560371 Q6ZSV7 163 aa10.21□□□□□ -0.78
TRAF3-208ENST00000560371 NREPQ16612 68 aa10.2□□□□□ -0.78
TRAF3-208ENST00000560371 C11orf71Q6IPW1 123 aa10.2□□□□□ -0.78
TRAF3-208ENST00000560371 LYRM9A8MSI8 78 aa10.2□□□□□ -0.78
TRAF3-208ENST00000560371 K7EP13 123 aa10.19□□□□□ -0.78
TRAF3-208ENST00000560371 DAND5Q8N907 189 aa10.19□□□□□ -0.78
TRAF3-208ENST00000560371 TRBV6-1A0A0K0K1D8 114 aa10.19□□□□□ -0.78
TRAF3-208ENST00000560371 TOMM6Q96B49 74 aa10.19□□□□□ -0.78
TRAF3-208ENST00000560371 Q6ZTI0 123 aa10.19□□□□□ -0.78
TRAF3-208ENST00000560371 PLA2G2AP14555 144 aa10.18□□□□□ -0.78
TRAF3-208ENST00000560371 A4D1N5 150 aa10.18□□□□□ -0.78
TRAF3-208ENST00000560371 H3BQ85 93 aa10.18□□□□□ -0.78
TRAF3-208ENST00000560371 K7EQG2 157 aa10.18□□□□□ -0.78
TRAF3-208ENST00000560371 IGKV3D-7A0A0C4DH55 119 aa10.18□□□□□ -0.78
TRAF3-208ENST00000560371 SPTSSBQ8NFR3 76 aa10.18□□□□□ -0.78
TRAF3-208ENST00000560371 K7EP34 96 aa10.18□□□□□ -0.78
TRAF3-208ENST00000560371 MUSTN1Q8IVN3 82 aa10.18□□□□□ -0.78
TRAF3-208ENST00000560371 IGKV1D-37A0A075B6S9 117 aa10.18□□□□□ -0.78
TRAF3-208ENST00000560371 IGKV2-24A0A0C4DH68 120 aa10.17□□□□□ -0.78
TRAF3-208ENST00000560371 UTRNP46939 3433 aa10.17□□□□□ -0.78
TRAF3-208ENST00000560371 ODF3Q96PU9 254 aa10.17□□□□□ -0.78
TRAF3-208ENST00000560371 A0A096LNI7 61 aa10.17□□□□□ -0.78
TRAF3-208ENST00000560371 CRYGDP07320 174 aa10.17□□□□□ -0.78
TRAF3-208ENST00000560371 LINC00269Q8N2A0 174 aa10.17□□□□□ -0.78
TRAF3-208ENST00000560371 BPTFQ12830 3046 aa10.17□□□□□ -0.78
TRAF3-208ENST00000560371 FAM110AQ9BQ89 295 aa10.17□□□□□ -0.78
TRAF3-208ENST00000560371 NTN5Q8WTR8 489 aaPredicted RBP10.16□□□□□ -0.78
TRAF3-208ENST00000560371 DIRC1Q969H9 104 aa10.16□□□□□ -0.78
TRAF3-208ENST00000560371 MIFP14174 115 aa10.15□□□□□ -0.78
TRAF3-208ENST00000560371 MIR7-3HGQ8N6C7 128 aa10.15□□□□□ -0.78
TRAF3-208ENST00000560371 P0DMU3 169 aa10.15□□□□□ -0.78
TRAF3-208ENST00000560371 FAM231AP0DMU4 169 aa10.15□□□□□ -0.78
TRAF3-208ENST00000560371 FAM231CP0DMU5 169 aa10.15□□□□□ -0.78
TRAF3-208ENST00000560371 SPANXDQ9BXN6 97 aa10.15□□□□□ -0.78
TRAF3-208ENST00000560371 HIGD2BQ4VC39 106 aa10.15□□□□□ -0.78
TRAF3-208ENST00000560371 LINC00482Q8N8I6 264 aa10.15□□□□□ -0.78
TRAF3-208ENST00000560371 TP53TG3Q9ULZ0 132 aa10.15□□□□□ -0.79
TRAF3-208ENST00000560371 LINC00173Q6ZV60 143 aa10.14□□□□□ -0.79
TRAF3-208ENST00000560371 EPG5Q9HCE0 2579 aa10.14□□□□□ -0.79
TRAF3-208ENST00000560371 K7ERS5 55 aa10.14□□□□□ -0.79
TRAF3-208ENST00000560371 NDUFC2O95298 119 aa10.14□□□□□ -0.79
TRAF3-208ENST00000560371 REG3AQ06141 175 aa10.14□□□□□ -0.79
TRAF3-208ENST00000560371 EBI3Q14213 229 aa10.14□□□□□ -0.79
TRAF3-208ENST00000560371 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
TRAF3-208ENST00000560371 B9D2Q9BPU9 175 aa10.13□□□□□ -0.79
TRAF3-208ENST00000560371 Q6ZUT4 128 aa10.13□□□□□ -0.79
TRAF3-208ENST00000560371 PSMG3-AS1Q96PY0 264 aa10.13□□□□□ -0.79
TRAF3-208ENST00000560371 E9PLD3 99 aa10.13□□□□□ -0.79
TRAF3-208ENST00000560371 IGHV1-58A0A0C4DH39 117 aa10.13□□□□□ -0.79
TRAF3-208ENST00000560371 C11orf86A6NJI1 115 aa10.13□□□□□ -0.79
TRAF3-208ENST00000560371 PSMB8P28062 276 aa10.12□□□□□ -0.79
TRAF3-208ENST00000560371 LINC01006Q8NI28 216 aa10.12□□□□□ -0.79
TRAF3-208ENST00000560371 LY6LH3BQJ8 138 aa10.12□□□□□ -0.79
TRAF3-208ENST00000560371 P0C879 139 aa10.12□□□□□ -0.79
TRAF3-208ENST00000560371 PLA2G2EQ9NZK7 142 aa10.12□□□□□ -0.79
TRAF3-208ENST00000560371 FLNBO75369 2602 aaKnown RBP10.12□□□□□ -0.79
TRAF3-208ENST00000560371 C19orf71A6NCJ1 209 aa10.12□□□□□ -0.79
TRAF3-208ENST00000560371 C10orf99Q6UWK7 81 aa10.12□□□□□ -0.79
TRAF3-208ENST00000560371 ZNF80P51504 273 aaPredicted RBP10.11□□□□□ -0.79
TRAF3-208ENST00000560371 COA6Q5JTJ3 125 aaKnown RBP10.11□□□□□ -0.79
TRAF3-208ENST00000560371 CEMP1Q6PRD7 247 aaPredicted RBP10.11□□□□□ -0.79
TRAF3-208ENST00000560371 ZFAND2AQ8N6M9 145 aa10.1□□□□□ -0.79
TRAF3-208ENST00000560371 MPLKIPQ8TAP9 179 aa10.1□□□□□ -0.79
TRAF3-208ENST00000560371 CRYGBP07316 175 aa10.1□□□□□ -0.79
TRAF3-208ENST00000560371 HIST2H2BDQ6DRA6 164 aa10.1□□□□□ -0.79
TRAF3-208ENST00000560371 A0A0J9YWU9 116 aa10.09□□□□□ -0.79
TRAF3-208ENST00000560371 ODF1Q14990 250 aa10.09□□□□□ -0.79
TRAF3-208ENST00000560371 UFSP1Q6NVU6 142 aa10.09□□□□□ -0.79
TRAF3-208ENST00000560371 LECT2O14960 151 aa10.09□□□□□ -0.79
TRAF3-208ENST00000560371 BRWD1-AS2P59051 145 aa10.09□□□□□ -0.79
TRAF3-208ENST00000560371 TMEM256-PLSCR3K7ERE1 68 aa10.08□□□□□ -0.8
TRAF3-208ENST00000560371 C20orf173Q96LM9 149 aa10.08□□□□□ -0.8
TRAF3-208ENST00000560371 NUPR1O60356 82 aa10.08□□□□□ -0.8
TRAF3-208ENST00000560371 BRK1Q8WUW1 75 aa10.08□□□□□ -0.8
TRAF3-208ENST00000560371 HIGD2AQ9BW72 106 aa10.08□□□□□ -0.8
TRAF3-208ENST00000560371 C1orf229Q6ZS94 237 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms