RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 SCGB3A1Q96QR1 104 aa10.25□□□□□ -0.77
CARMIL3-203ENST00000560349 TM2D2Q9BX73 214 aa10.25□□□□□ -0.77
CARMIL3-203ENST00000560349 POM121L12Q8N7R1 296 aa10.24□□□□□ -0.77
CARMIL3-203ENST00000560349 OR5A1Q8NGJ0 315 aa10.24□□□□□ -0.77
CARMIL3-203ENST00000560349 IGLV1-51P01701 117 aa10.24□□□□□ -0.77
CARMIL3-203ENST00000560349 Q6ZSN1 163 aa10.24□□□□□ -0.77
CARMIL3-203ENST00000560349 C1orf158Q8N1D5 194 aa10.24□□□□□ -0.77
CARMIL3-203ENST00000560349 NHP2Q9NX24 153 aaKnown RBP10.24□□□□□ -0.77
CARMIL3-203ENST00000560349 TRAV25A0A0B4J276 109 aa10.23□□□□□ -0.77
CARMIL3-203ENST00000560349 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.23□□□□□ -0.77
CARMIL3-203ENST00000560349 EMP1P54849 157 aa10.23□□□□□ -0.77
CARMIL3-203ENST00000560349 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
CARMIL3-203ENST00000560349 TRPT1Q86TN4 253 aaKnown RBP10.23□□□□□ -0.77
CARMIL3-203ENST00000560349 TP53TG1Q9Y2A0 90 aa10.23□□□□□ -0.77
CARMIL3-203ENST00000560349 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
CARMIL3-203ENST00000560349 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
CARMIL3-203ENST00000560349 TOMM6Q96B49 74 aa10.22□□□□□ -0.77
CARMIL3-203ENST00000560349 ZNF415Q09FC8 603 aa10.22□□□□□ -0.77
CARMIL3-203ENST00000560349 ZFP2Q6ZN57 461 aa10.22□□□□□ -0.77
CARMIL3-203ENST00000560349 STAB1Q9NY15 2570 aa10.22□□□□□ -0.77
CARMIL3-203ENST00000560349 H7C1H1 209 aa10.21□□□□□ -0.78
CARMIL3-203ENST00000560349 M0R2P5 195 aa10.21□□□□□ -0.78
CARMIL3-203ENST00000560349 PLNP26678 52 aa10.21□□□□□ -0.78
CARMIL3-203ENST00000560349 KIR2DL4Q99706 377 aa10.21□□□□□ -0.78
CARMIL3-203ENST00000560349 OPRPNQ99935 248 aaPredicted RBP10.21□□□□□ -0.78
CARMIL3-203ENST00000560349 FBN1P35555 2871 aaKnown RBP10.21□□□□□ -0.78
CARMIL3-203ENST00000560349 TRAV12-1A0A0B4J245 112 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 F8VRH5 84 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 IGHV3-53P01767 116 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 GIG44P09565 113 aaPredicted RBP10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 FAM110AQ9BQ89 295 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 OR11H2Q8NH07 326 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 C19orf73Q9NVV2 129 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 PKD1L1Q8TDX9 2849 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 PPP1R17O96001 155 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 CFAP126Q5VTH2 177 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 NEXN-AS1Q8NBZ9 246 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 BAALCQ8WXS3 180 aa10.2□□□□□ -0.78
CARMIL3-203ENST00000560349 MAST4O15021 2626 aa10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 TRGV1A0A0A0MS02 117 aa10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 IGLL5B9A064 214 aa10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 E9PLD3 99 aa10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 VCYO14598 125 aa10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 TSHBP01222 138 aa10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 IGHV3-38A0A0C4DH36 116 aa10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 C12orf74Q32Q52 190 aa10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 NDUFA11Q86Y39 141 aa10.19□□□□□ -0.78
CARMIL3-203ENST00000560349 TRBV27A0A0K0K1C4 114 aa10.18□□□□□ -0.78
CARMIL3-203ENST00000560349 LINC00482Q8N8I6 264 aa10.18□□□□□ -0.78
CARMIL3-203ENST00000560349 CYSLTR1Q9Y271 337 aa10.18□□□□□ -0.78
CARMIL3-203ENST00000560349 TAL2Q16559 108 aa10.18□□□□□ -0.78
CARMIL3-203ENST00000560349 Q6ZTI0 123 aa10.18□□□□□ -0.78
CARMIL3-203ENST00000560349 HIST1H4GQ99525 98 aa10.18□□□□□ -0.78
CARMIL3-203ENST00000560349 TRBV7-3A0A075B6L6 115 aa10.17□□□□□ -0.78
CARMIL3-203ENST00000560349 PRSS29PA6NIE9 313 aa10.17□□□□□ -0.78
CARMIL3-203ENST00000560349 RNF183Q96D59 192 aa10.17□□□□□ -0.78
CARMIL3-203ENST00000560349 BAHCC1Q9P281 2608 aa10.17□□□□□ -0.78
CARMIL3-203ENST00000560349 MYMXA0A1B0GTQ4 84 aa10.16□□□□□ -0.78
CARMIL3-203ENST00000560349 CRLF1O75462 422 aa10.16□□□□□ -0.78
CARMIL3-203ENST00000560349 BEAN1Q3B7T3 259 aa10.16□□□□□ -0.78
CARMIL3-203ENST00000560349 MTURNQ8N3F0 131 aa10.16□□□□□ -0.78
CARMIL3-203ENST00000560349 NOP10Q9NPE3 64 aaKnown RBP10.16□□□□□ -0.78
CARMIL3-203ENST00000560349 TNFRSF18Q9Y5U5 241 aa10.16□□□□□ -0.78
CARMIL3-203ENST00000560349 TRBV6-5A0A0K0K1A5 114 aa10.16□□□□□ -0.78
CARMIL3-203ENST00000560349 CEMP1Q6PRD7 247 aaPredicted RBP10.16□□□□□ -0.78
CARMIL3-203ENST00000560349 A8MWV9 139 aa10.15□□□□□ -0.78
CARMIL3-203ENST00000560349 SMIM20Q8N5G0 67 aa10.15□□□□□ -0.78
CARMIL3-203ENST00000560349 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.78
CARMIL3-203ENST00000560349 IGIPA6NJ69 53 aa10.14□□□□□ -0.79
CARMIL3-203ENST00000560349 WFDC2Q14508 124 aa10.14□□□□□ -0.79
CARMIL3-203ENST00000560349 I3L3M4 83 aa10.13□□□□□ -0.79
CARMIL3-203ENST00000560349 H3BMG7 143 aa10.13□□□□□ -0.79
CARMIL3-203ENST00000560349 RPL32P62910 135 aaKnown RBP10.13□□□□□ -0.79
CARMIL3-203ENST00000560349 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
CARMIL3-203ENST00000560349 B5MCH6 92 aa10.12□□□□□ -0.79
CARMIL3-203ENST00000560349 A0A1B0GWB2 263 aa10.12□□□□□ -0.79
CARMIL3-203ENST00000560349 SPANXB1Q9NS25 103 aaPredicted RBP10.12□□□□□ -0.79
CARMIL3-203ENST00000560349 GAGE7O76087 117 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 GAGE12FP0CL80 117 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 GAGE12GP0CL81 117 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 GAGE12IP0CL82 117 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 RRN3P1Q2M238 152 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 PLEKHB2Q96CS7 222 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 SPXQ9BT56 116 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 IGKV2-29A2NJV5 120 aaPredicted RBP10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 C11orf86A6NJI1 115 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 F8W1H4 67 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 J3QR89 54 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 ERG28Q9UKR5 140 aa10.11□□□□□ -0.79
CARMIL3-203ENST00000560349 C20orf203Q8NBC4 194 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 IGLV4-69A0A075B6H9 119 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 PLAC8L1A1L4L8 177 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 GAGE5Q13069 117 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 GAGE6Q13070 117 aa10.1□□□□□ -0.79
CARMIL3-203ENST00000560349 CSNK1G2-AS1Q8NCQ2 148 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms