RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
HMBOX1-213ENST00000560269 NTM-AS1Q6ZSK4 140 aa9.42□□□□□ -0.9
HMBOX1-213ENST00000560269 URB1-AS1Q96HZ7 61 aa9.42□□□□□ -0.9
HMBOX1-213ENST00000560269 TRBV6-8A0A0A6YYG3 113 aa9.41□□□□□ -0.9
HMBOX1-213ENST00000560269 C3orf84H3BNL1 204 aa9.41□□□□□ -0.9
HMBOX1-213ENST00000560269 LINC00614P0C842 121 aa9.41□□□□□ -0.9
HMBOX1-213ENST00000560269 FA2HQ7L5A8 372 aa9.41□□□□□ -0.9
HMBOX1-213ENST00000560269 NIT1Q86X76 327 aa9.41□□□□□ -0.9
HMBOX1-213ENST00000560269 DEFB104AQ8WTQ1 72 aa9.41□□□□□ -0.9
HMBOX1-213ENST00000560269 FCER1GP30273 86 aa9.4□□□□□ -0.9
HMBOX1-213ENST00000560269 ESRGQ1W209 222 aa9.4□□□□□ -0.9
HMBOX1-213ENST00000560269 BAGE3Q86Y29 109 aa9.4□□□□□ -0.9
HMBOX1-213ENST00000560269 IGHV1-24A0A0C4DH33 117 aa9.39□□□□□ -0.91
HMBOX1-213ENST00000560269 ESDP10768 282 aa9.39□□□□□ -0.91
HMBOX1-213ENST00000560269 LAGE3Q14657 143 aa9.39□□□□□ -0.91
HMBOX1-213ENST00000560269 ORMDL2Q53FV1 153 aa9.39□□□□□ -0.91
HMBOX1-213ENST00000560269 CASC10Q5T4H9 136 aa9.39□□□□□ -0.91
HMBOX1-213ENST00000560269 LELP1Q5T871 98 aa9.39□□□□□ -0.91
HMBOX1-213ENST00000560269 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
HMBOX1-213ENST00000560269 CHCHD7Q9BUK0 85 aa9.39□□□□□ -0.91
HMBOX1-213ENST00000560269 TENM2Q9NT68 2774 aa9.39□□□□□ -0.91
HMBOX1-213ENST00000560269 TRBV25-1A0A075B6N4 114 aa9.38□□□□□ -0.91
HMBOX1-213ENST00000560269 AMTP48728 403 aa9.38□□□□□ -0.91
HMBOX1-213ENST00000560269 LINC00310P59036 64 aa9.38□□□□□ -0.91
HMBOX1-213ENST00000560269 COA6Q5JTJ3 125 aaKnown RBP9.38□□□□□ -0.91
HMBOX1-213ENST00000560269 RNASEKQ6P5S7 137 aaKnown RBP9.38□□□□□ -0.91
HMBOX1-213ENST00000560269 AP5S1Q9NUS5 200 aa9.38□□□□□ -0.91
HMBOX1-213ENST00000560269 SERF1AO75920 110 aa9.37□□□□□ -0.91
HMBOX1-213ENST00000560269 CCL18P55774 89 aa9.37□□□□□ -0.91
HMBOX1-213ENST00000560269 C20orf203Q8NBC4 194 aa9.37□□□□□ -0.91
HMBOX1-213ENST00000560269 TMEM243Q9BU79 118 aa9.37□□□□□ -0.91
HMBOX1-213ENST00000560269 MRPS16Q9Y3D3 137 aaKnown RBP9.37□□□□□ -0.91
HMBOX1-213ENST00000560269 LINC00588Q9Y4M8 146 aa9.37□□□□□ -0.91
HMBOX1-213ENST00000560269 NDUFA6P56556 154 aa9.36□□□□□ -0.91
HMBOX1-213ENST00000560269 H7C423 109 aa9.35□□□□□ -0.91
HMBOX1-213ENST00000560269 NUPR1O60356 82 aa9.35□□□□□ -0.91
HMBOX1-213ENST00000560269 G0S2P27469 103 aa9.35□□□□□ -0.91
HMBOX1-213ENST00000560269 UPK3BQ9BT76 320 aa9.35□□□□□ -0.91
HMBOX1-213ENST00000560269 VPS13DQ5THJ4 4388 aa9.35□□□□□ -0.91
HMBOX1-213ENST00000560269 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.34□□□□□ -0.91
HMBOX1-213ENST00000560269 A0A096LNJ9 63 aa9.34□□□□□ -0.91
HMBOX1-213ENST00000560269 TRAV8-6A0A0B4J262 113 aa9.34□□□□□ -0.91
HMBOX1-213ENST00000560269 IGKV2-29A2NJV5 120 aaPredicted RBP9.34□□□□□ -0.91
HMBOX1-213ENST00000560269 HSBP1O75506 76 aa9.34□□□□□ -0.91
HMBOX1-213ENST00000560269 TMEM18Q96B42 140 aa9.34□□□□□ -0.91
HMBOX1-213ENST00000560269 CHCHD5Q9BSY4 110 aa9.34□□□□□ -0.91
HMBOX1-213ENST00000560269 LINC01549A6NIU2 74 aa9.33□□□□□ -0.92
HMBOX1-213ENST00000560269 UBE2L6O14933 153 aa9.33□□□□□ -0.92
HMBOX1-213ENST00000560269 HBDP02042 147 aa9.33□□□□□ -0.92
HMBOX1-213ENST00000560269 C2orf66Q6UXQ4 117 aa9.33□□□□□ -0.92
HMBOX1-213ENST00000560269 WFDC10BQ8IUB3 73 aa9.33□□□□□ -0.92
HMBOX1-213ENST00000560269 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
HMBOX1-213ENST00000560269 DNAH1Q9P2D7 4330 aa9.33□□□□□ -0.92
HMBOX1-213ENST00000560269 BTF3P20290 206 aaKnown RBP9.32□□□□□ -0.92
HMBOX1-213ENST00000560269 PKIAP61925 76 aa9.32□□□□□ -0.92
HMBOX1-213ENST00000560269 RPL39P62891 51 aaKnown RBP9.32□□□□□ -0.92
HMBOX1-213ENST00000560269 PMCHL1Q16048 86 aa9.32□□□□□ -0.92
HMBOX1-213ENST00000560269 MRPL52Q86TS9 123 aaKnown RBP9.32□□□□□ -0.92
HMBOX1-213ENST00000560269 TIMM21Q9BVV7 248 aa9.32□□□□□ -0.92
HMBOX1-213ENST00000560269 CYSLTR1Q9Y271 337 aa9.32□□□□□ -0.92
HMBOX1-213ENST00000560269 S100A6P06703 90 aa9.31□□□□□ -0.92
HMBOX1-213ENST00000560269 FGF6P10767 208 aa9.31□□□□□ -0.92
HMBOX1-213ENST00000560269 GAGE6Q13070 117 aa9.31□□□□□ -0.92
HMBOX1-213ENST00000560269 UBE2DNLQ8IWF7 75 aa9.31□□□□□ -0.92
HMBOX1-213ENST00000560269 UBE2D4Q9Y2X8 147 aa9.31□□□□□ -0.92
HMBOX1-213ENST00000560269 A0A1B0GUV1 79 aa9.3□□□□□ -0.92
HMBOX1-213ENST00000560269 ZNF25P17030 456 aaPredicted RBP9.3□□□□□ -0.92
HMBOX1-213ENST00000560269 SMAGPQ0VAQ4 97 aa9.3□□□□□ -0.92
HMBOX1-213ENST00000560269 PDZD11Q5EBL8 140 aa9.3□□□□□ -0.92
HMBOX1-213ENST00000560269 LGALS9CQ6DKI2 356 aa9.3□□□□□ -0.92
HMBOX1-213ENST00000560269 FAM19A2Q8N3H0 131 aa9.3□□□□□ -0.92
HMBOX1-213ENST00000560269 SPANXA1Q9NS26 97 aa9.3□□□□□ -0.92
HMBOX1-213ENST00000560269 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
HMBOX1-213ENST00000560269 CSDC2Q9Y534 153 aaKnown RBP9.3□□□□□ -0.92
HMBOX1-213ENST00000560269 LYSTQ99698 3801 aa9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 IGIPA6NJ69 53 aa9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 TMEM262E9PQX1 116 aa9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 SIVA1O15304 175 aa9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 DNAH10OSP0CZ25 163 aa9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 RBX1P62877 108 aa9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 MPV17L2Q567V2 206 aa9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 LINC01556Q5JQF7 62 aa9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 ERASQ7Z444 233 aa9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
HMBOX1-213ENST00000560269 A0A087WX48 190 aa9.28□□□□□ -0.92
HMBOX1-213ENST00000560269 C5orf52A6NGY3 159 aa9.28□□□□□ -0.92
HMBOX1-213ENST00000560269 NPSP0C0P6 89 aa9.28□□□□□ -0.92
HMBOX1-213ENST00000560269 AMMECR1LQ6DCA0 310 aa9.28□□□□□ -0.92
HMBOX1-213ENST00000560269 FAM104AQ969W3 186 aa9.28□□□□□ -0.92
HMBOX1-213ENST00000560269 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
HMBOX1-213ENST00000560269 TIMM17AQ99595 171 aa9.28□□□□□ -0.92
HMBOX1-213ENST00000560269 Q9H8V8 135 aa9.28□□□□□ -0.92
HMBOX1-213ENST00000560269 ALMS1Q8TCU4 4167 aa9.27□□□□□ -0.93
HMBOX1-213ENST00000560269 IGLV4-60A0A075B6I1 120 aa9.27□□□□□ -0.93
HMBOX1-213ENST00000560269 SNRPEP62304 92 aaKnown RBP9.27□□□□□ -0.93
HMBOX1-213ENST00000560269 MRPS36P82909 103 aaKnown RBP9.27□□□□□ -0.93
HMBOX1-213ENST00000560269 HIST3H2BBQ8N257 126 aa9.27□□□□□ -0.93
HMBOX1-213ENST00000560269 Q8N3U1 123 aa9.27□□□□□ -0.93
HMBOX1-213ENST00000560269 Q8N976 141 aa9.27□□□□□ -0.93
HMBOX1-213ENST00000560269 TMEM141Q96I45 108 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms