RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 IGLV4-60A0A075B6I1 120 aa7.64□□□□□ -1.19
RABGGTA-216ENST00000560243 CRPP02741 224 aa7.64□□□□□ -1.19
RABGGTA-216ENST00000560243 PKIAP61925 76 aa7.64□□□□□ -1.19
RABGGTA-216ENST00000560243 KRTAP26-1Q6PEX3 210 aa7.64□□□□□ -1.19
RABGGTA-216ENST00000560243 SMIM15Q7Z3B0 74 aa7.64□□□□□ -1.19
RABGGTA-216ENST00000560243 C20orf203Q8NBC4 194 aa7.64□□□□□ -1.19
RABGGTA-216ENST00000560243 C1orf43Q9BWL3 253 aa7.64□□□□□ -1.19
RABGGTA-216ENST00000560243 GFRA4Q9GZZ7 299 aa7.64□□□□□ -1.19
RABGGTA-216ENST00000560243 SRRM2Q9UQ35 2752 aaKnown RBP7.63□□□□□ -1.19
RABGGTA-216ENST00000560243 A0A1B0GUT8 65 aa7.63□□□□□ -1.19
RABGGTA-216ENST00000560243 AMTP48728 403 aa7.63□□□□□ -1.19
RABGGTA-216ENST00000560243 COTL1Q14019 142 aa7.63□□□□□ -1.19
RABGGTA-216ENST00000560243 PEA15Q15121 130 aa7.63□□□□□ -1.19
RABGGTA-216ENST00000560243 ADIRFQ15847 76 aa7.63□□□□□ -1.19
RABGGTA-216ENST00000560243 FAM74A3Q4VXF1 159 aa7.63□□□□□ -1.19
RABGGTA-216ENST00000560243 FRZBQ92765 325 aa7.63□□□□□ -1.19
RABGGTA-216ENST00000560243 VPS13BQ7Z7G8 4022 aa7.63□□□□□ -1.19
RABGGTA-216ENST00000560243 FAM231BA6NCW3 169 aa7.62□□□□□ -1.19
RABGGTA-216ENST00000560243 HLA-DQA1P01909 254 aa7.62□□□□□ -1.19
RABGGTA-216ENST00000560243 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
RABGGTA-216ENST00000560243 MIAQ16674 131 aa7.62□□□□□ -1.19
RABGGTA-216ENST00000560243 NUP35Q8NFH5 326 aa7.62□□□□□ -1.19
RABGGTA-216ENST00000560243 BORCS7Q96B45 105 aa7.62□□□□□ -1.19
RABGGTA-216ENST00000560243 RNF185Q96GF1 192 aa7.62□□□□□ -1.19
RABGGTA-216ENST00000560243 TMEM70Q9BUB7 260 aa7.62□□□□□ -1.19
RABGGTA-216ENST00000560243 NAT8Q9UHE5 227 aa7.62□□□□□ -1.19
RABGGTA-216ENST00000560243 IGLV10-54A0A075B6I4 117 aa7.61□□□□□ -1.19
RABGGTA-216ENST00000560243 SDHAF1A6NFY7 115 aa7.61□□□□□ -1.19
RABGGTA-216ENST00000560243 USP17L23D6RBM5 183 aa7.61□□□□□ -1.19
RABGGTA-216ENST00000560243 RPS10P46783 165 aaKnown RBP7.61□□□□□ -1.19
RABGGTA-216ENST00000560243 REG3AQ06141 175 aa7.61□□□□□ -1.19
RABGGTA-216ENST00000560243 AMN1Q8IY45 258 aa7.61□□□□□ -1.19
RABGGTA-216ENST00000560243 TMEM191AQ9H0A3 160 aa7.61□□□□□ -1.19
RABGGTA-216ENST00000560243 A0A1B0GUV1 79 aa7.6□□□□□ -1.19
RABGGTA-216ENST00000560243 EPM2AB3EWF7 344 aa7.6□□□□□ -1.19
RABGGTA-216ENST00000560243 RAB4AP20338 218 aa7.6□□□□□ -1.19
RABGGTA-216ENST00000560243 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 TRBV6-5A0A0K0K1A5 114 aa7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 SMIM27A0A1W2PRY6 76 aa7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 IGKV2-29A2NJV5 120 aaPredicted RBP7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 SMKR1H3BMG3 65 aa7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 UBE2L6O14933 153 aa7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 NCR2O95944 276 aa7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 RIGQ13278 110 aa7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 Q6ZSA8 131 aa7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 SMDT1Q9H4I9 107 aa7.59□□□□□ -1.19
RABGGTA-216ENST00000560243 TSHBP01222 138 aa7.58□□□□□ -1.2
RABGGTA-216ENST00000560243 PRSS1P07477 247 aa7.58□□□□□ -1.2
RABGGTA-216ENST00000560243 PMCHP20382 165 aa7.58□□□□□ -1.2
RABGGTA-216ENST00000560243 Q5VSD8 79 aa7.58□□□□□ -1.2
RABGGTA-216ENST00000560243 NAT8BQ9UHF3 227 aa7.58□□□□□ -1.2
RABGGTA-216ENST00000560243 I3L3M4 83 aa7.57□□□□□ -1.2
RABGGTA-216ENST00000560243 APCSP02743 223 aa7.57□□□□□ -1.2
RABGGTA-216ENST00000560243 MRAP2Q96G30 205 aa7.57□□□□□ -1.2
RABGGTA-216ENST00000560243 ST20Q9HBF5 79 aa7.57□□□□□ -1.2
RABGGTA-216ENST00000560243 TMEM242Q9NWH2 141 aa7.57□□□□□ -1.2
RABGGTA-216ENST00000560243 FLG2Q5D862 2391 aaPredicted RBP7.57□□□□□ -1.2
RABGGTA-216ENST00000560243 IGKV3OR2-268A0A0C4DH90 116 aa7.56□□□□□ -1.2
RABGGTA-216ENST00000560243 FGF6P10767 208 aa7.56□□□□□ -1.2
RABGGTA-216ENST00000560243 CAMPP49913 170 aa7.56□□□□□ -1.2
RABGGTA-216ENST00000560243 POLR2KP53803 58 aaKnown RBP7.56□□□□□ -1.2
RABGGTA-216ENST00000560243 C14orf177Q52M58 125 aa7.56□□□□□ -1.2
RABGGTA-216ENST00000560243 AMMECR1LQ6DCA0 310 aa7.56□□□□□ -1.2
RABGGTA-216ENST00000560243 RNASEKQ6P5S7 137 aaKnown RBP7.56□□□□□ -1.2
RABGGTA-216ENST00000560243 NRACQ8N912 160 aa7.56□□□□□ -1.2
RABGGTA-216ENST00000560243 TRAV8-4A0A0B4J246 113 aa7.55□□□□□ -1.2
RABGGTA-216ENST00000560243 ESDP10768 282 aa7.55□□□□□ -1.2
RABGGTA-216ENST00000560243 MRPL51Q4U2R6 128 aaKnown RBP7.55□□□□□ -1.2
RABGGTA-216ENST00000560243 FAM104BQ5XKR9 115 aa7.55□□□□□ -1.2
RABGGTA-216ENST00000560243 MRPL54Q6P161 138 aaKnown RBP7.55□□□□□ -1.2
RABGGTA-216ENST00000560243 TRBV27A0A0K0K1C4 114 aa7.54□□□□□ -1.2
RABGGTA-216ENST00000560243 H7C423 109 aa7.54□□□□□ -1.2
RABGGTA-216ENST00000560243 SCXQ7RTU7 201 aa7.54□□□□□ -1.2
RABGGTA-216ENST00000560243 MYCBP2O75592 4640 aa7.53□□□□□ -1.2
RABGGTA-216ENST00000560243 A0A1B0GXF2 115 aa7.53□□□□□ -1.2
RABGGTA-216ENST00000560243 GAGE12HA6NDE8 117 aa7.53□□□□□ -1.2
RABGGTA-216ENST00000560243 RAB14P61106 215 aa7.53□□□□□ -1.2
RABGGTA-216ENST00000560243 hDV102S1A0JD36 115 aa7.52□□□□□ -1.21
RABGGTA-216ENST00000560243 FAM229AH3BQW9 127 aa7.52□□□□□ -1.21
RABGGTA-216ENST00000560243 SLPIP03973 132 aa7.52□□□□□ -1.21
RABGGTA-216ENST00000560243 INAFM2P0DMQ5 153 aa7.52□□□□□ -1.21
RABGGTA-216ENST00000560243 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
RABGGTA-216ENST00000560243 IFITM2Q01629 132 aa7.52□□□□□ -1.21
RABGGTA-216ENST00000560243 C15orf56Q8N910 161 aa7.52□□□□□ -1.21
RABGGTA-216ENST00000560243 CHCHD10Q8WYQ3 142 aaPredicted RBP7.52□□□□□ -1.21
RABGGTA-216ENST00000560243 CHAC1Q9BUX1 264 aa7.52□□□□□ -1.21
RABGGTA-216ENST00000560243 A0A1B0GW15 77 aa7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 VCYO14598 125 aa7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 ZNF25P17030 456 aaPredicted RBP7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 HBBP68871 147 aa7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 CLLU1Q5K131 121 aa7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 DGAT2L7PQ6IED9 249 aa7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 OR5A1Q8NGJ0 315 aa7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 CIRBP-AS1Q8TBR5 109 aa7.51□□□□□ -1.21
RABGGTA-216ENST00000560243 DMBT1Q9UGM3 2413 aaPredicted RBP7.5□□□□□ -1.21
RABGGTA-216ENST00000560243 C7orf77A4D0Y5 90 aa7.5□□□□□ -1.21
RABGGTA-216ENST00000560243 PANO1I0J062 215 aa7.5□□□□□ -1.21
RABGGTA-216ENST00000560243 FCER1GP30273 86 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms