RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
CDC42BPB-206ENST00000559790 NIT2Q9NQR4 276 aa11.94□□□□□ -0.5
CDC42BPB-206ENST00000559790 F2Z2F3 143 aa11.93□□□□□ -0.5
CDC42BPB-206ENST00000559790 SERTAD4-AS1Q5TG53 156 aa11.93□□□□□ -0.5
CDC42BPB-206ENST00000559790 GATD1Q8NB37 220 aa11.93□□□□□ -0.5
CDC42BPB-206ENST00000559790 CLRN3Q8NCR9 226 aa11.93□□□□□ -0.5
CDC42BPB-206ENST00000559790 NUDT10Q8NFP7 164 aa11.93□□□□□ -0.5
CDC42BPB-206ENST00000559790 NUDT11Q96G61 164 aa11.93□□□□□ -0.5
CDC42BPB-206ENST00000559790 TRAV8-4A0A0B4J246 113 aa11.92□□□□□ -0.5
CDC42BPB-206ENST00000559790 TRAV26-2A0A0B4J265 109 aa11.92□□□□□ -0.5
CDC42BPB-206ENST00000559790 PDE6DO43924 150 aa11.92□□□□□ -0.5
CDC42BPB-206ENST00000559790 SPACA4Q8TDM5 124 aa11.92□□□□□ -0.5
CDC42BPB-206ENST00000559790 hDV102S1A0JD36 115 aa11.91□□□□□ -0.5
CDC42BPB-206ENST00000559790 IFNA1P01562 189 aa11.91□□□□□ -0.5
CDC42BPB-206ENST00000559790 TRGC1P0CF51 173 aa11.91□□□□□ -0.5
CDC42BPB-206ENST00000559790 GTSF1Q8WW33 167 aa11.91□□□□□ -0.5
CDC42BPB-206ENST00000559790 WDR73Q6P4I2 378 aa11.9□□□□□ -0.5
CDC42BPB-206ENST00000559790 Q6ZNX1 250 aa11.9□□□□□ -0.5
CDC42BPB-206ENST00000559790 RNASE7Q9H1E1 156 aaKnown RBP11.9□□□□□ -0.5
CDC42BPB-206ENST00000559790 MED9Q9NWA0 146 aa11.9□□□□□ -0.5
CDC42BPB-206ENST00000559790 A0A087WYN8 130 aa11.89□□□□□ -0.51
CDC42BPB-206ENST00000559790 FOXA3P55318 350 aaPredicted RBP11.89□□□□□ -0.51
CDC42BPB-206ENST00000559790 RPL39LQ96EH5 51 aaKnown RBP11.89□□□□□ -0.51
CDC42BPB-206ENST00000559790 AMTP48728 403 aa11.88□□□□□ -0.51
CDC42BPB-206ENST00000559790 TCTE3Q8IZS6 198 aa11.88□□□□□ -0.51
CDC42BPB-206ENST00000559790 RPP21Q9H633 154 aaKnown RBP11.88□□□□□ -0.51
CDC42BPB-206ENST00000559790 XKRY2A2RUG3 117 aa11.87□□□□□ -0.51
CDC42BPB-206ENST00000559790 COTL1Q14019 142 aa11.87□□□□□ -0.51
CDC42BPB-206ENST00000559790 OCC1Q8TAD7 63 aa11.87□□□□□ -0.51
CDC42BPB-206ENST00000559790 IGHV3-64A0A075B6Q5 118 aa11.86□□□□□ -0.51
CDC42BPB-206ENST00000559790 GAS8-AS1O95177 125 aa11.86□□□□□ -0.51
CDC42BPB-206ENST00000559790 PLAC8Q9NZF1 115 aa11.86□□□□□ -0.51
CDC42BPB-206ENST00000559790 GAGE12HA6NDE8 117 aa11.85□□□□□ -0.51
CDC42BPB-206ENST00000559790 EIF5AL1Q6IS14 154 aaKnown RBP11.85□□□□□ -0.51
CDC42BPB-206ENST00000559790 PLA2G2DQ9UNK4 145 aa11.85□□□□□ -0.51
CDC42BPB-206ENST00000559790 FAM231BA6NCW3 169 aa11.84□□□□□ -0.51
CDC42BPB-206ENST00000559790 TWIST1Q15672 202 aa11.84□□□□□ -0.51
CDC42BPB-206ENST00000559790 SLC51BQ86UW2 128 aa11.84□□□□□ -0.51
CDC42BPB-206ENST00000559790 RNF185Q96GF1 192 aa11.84□□□□□ -0.51
CDC42BPB-206ENST00000559790 BIN3Q9NQY0 253 aa11.84□□□□□ -0.51
CDC42BPB-206ENST00000559790 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPB-206ENST00000559790 IGKV2-29A2NJV5 120 aaPredicted RBP11.83□□□□□ -0.52
CDC42BPB-206ENST00000559790 TEX46H3BTG2 121 aa11.83□□□□□ -0.52
CDC42BPB-206ENST00000559790 GVQW2A0A096LPI5 108 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPB-206ENST00000559790 UBE2L6O14933 153 aa11.82□□□□□ -0.52
CDC42BPB-206ENST00000559790 HIGD2BQ4VC39 106 aa11.82□□□□□ -0.52
CDC42BPB-206ENST00000559790 Q6ZRU5 148 aa11.82□□□□□ -0.52
CDC42BPB-206ENST00000559790 PRSS3P2Q8NHM4 247 aa11.82□□□□□ -0.52
CDC42BPB-206ENST00000559790 CHCHD10Q8WYQ3 142 aaPredicted RBP11.82□□□□□ -0.52
CDC42BPB-206ENST00000559790 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
CDC42BPB-206ENST00000559790 PHOX2AO14813 284 aa11.81□□□□□ -0.52
CDC42BPB-206ENST00000559790 COX6A2Q02221 97 aa11.81□□□□□ -0.52
CDC42BPB-206ENST00000559790 FOXI1Q12951 378 aa11.81□□□□□ -0.52
CDC42BPB-206ENST00000559790 AP5S1Q9NUS5 200 aa11.81□□□□□ -0.52
CDC42BPB-206ENST00000559790 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.8□□□□□ -0.52
CDC42BPB-206ENST00000559790 SDHAF1A6NFY7 115 aa11.8□□□□□ -0.52
CDC42BPB-206ENST00000559790 NCR2O95944 276 aa11.8□□□□□ -0.52
CDC42BPB-206ENST00000559790 FGF6P10767 208 aa11.8□□□□□ -0.52
CDC42BPB-206ENST00000559790 LYPD6BQ8NI32 183 aa11.8□□□□□ -0.52
CDC42BPB-206ENST00000559790 LRP2P98164 4655 aa11.8□□□□□ -0.52
CDC42BPB-206ENST00000559790 TRBV6-5A0A0K0K1A5 114 aa11.79□□□□□ -0.52
CDC42BPB-206ENST00000559790 TAGLN2P37802 199 aaKnown RBP11.79□□□□□ -0.52
CDC42BPB-206ENST00000559790 FAM231DQ6ZW35 169 aa11.79□□□□□ -0.52
CDC42BPB-206ENST00000559790 A0A096LNI7 61 aa11.78□□□□□ -0.52
CDC42BPB-206ENST00000559790 TSHBP01222 138 aa11.78□□□□□ -0.52
CDC42BPB-206ENST00000559790 ESDP10768 282 aa11.78□□□□□ -0.52
CDC42BPB-206ENST00000559790 TMEM250H0YL14 139 aa11.77□□□□□ -0.53
CDC42BPB-206ENST00000559790 H7C423 109 aa11.77□□□□□ -0.53
CDC42BPB-206ENST00000559790 APCSP02743 223 aa11.77□□□□□ -0.53
CDC42BPB-206ENST00000559790 RPS10P46783 165 aaKnown RBP11.77□□□□□ -0.53
CDC42BPB-206ENST00000559790 PRR3P79522 188 aaKnown RBP11.76□□□□□ -0.53
CDC42BPB-206ENST00000559790 ODF1Q14990 250 aa11.76□□□□□ -0.53
CDC42BPB-206ENST00000559790 ALKAL2Q6UX46 152 aa11.76□□□□□ -0.53
CDC42BPB-206ENST00000559790 NDUFS6O75380 124 aaKnown RBP11.75□□□□□ -0.53
CDC42BPB-206ENST00000559790 CT83Q5H943 113 aa11.75□□□□□ -0.53
CDC42BPB-206ENST00000559790 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
CDC42BPB-206ENST00000559790 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
CDC42BPB-206ENST00000559790 IGKV2-24A0A0C4DH68 120 aa11.74□□□□□ -0.53
CDC42BPB-206ENST00000559790 GATCO43716 136 aaKnown RBP11.74□□□□□ -0.53
CDC42BPB-206ENST00000559790 AMMECR1LQ6DCA0 310 aa11.74□□□□□ -0.53
CDC42BPB-206ENST00000559790 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
CDC42BPB-206ENST00000559790 TMEM242Q9NWH2 141 aa11.74□□□□□ -0.53
CDC42BPB-206ENST00000559790 LINC00959A0A1B0GUT2 108 aa11.73□□□□□ -0.53
CDC42BPB-206ENST00000559790 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-206ENST00000559790 POLR2KP53803 58 aaKnown RBP11.73□□□□□ -0.53
CDC42BPB-206ENST00000559790 MAJINQ3KP22 176 aa11.73□□□□□ -0.53
CDC42BPB-206ENST00000559790 CFAP161Q6P656 301 aa11.73□□□□□ -0.53
CDC42BPB-206ENST00000559790 A8MWL6 223 aa11.72□□□□□ -0.53
CDC42BPB-206ENST00000559790 I3L3M4 83 aa11.72□□□□□ -0.53
CDC42BPB-206ENST00000559790 CCL25O15444 150 aa11.72□□□□□ -0.53
CDC42BPB-206ENST00000559790 XCL1P47992 114 aa11.72□□□□□ -0.53
CDC42BPB-206ENST00000559790 TEX261Q6UWH6 196 aa11.72□□□□□ -0.53
CDC42BPB-206ENST00000559790 MRPL52Q86TS9 123 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-206ENST00000559790 LINC01551Q86U37 167 aa11.71□□□□□ -0.53
CDC42BPB-206ENST00000559790 STPG4Q8N801 248 aa11.71□□□□□ -0.53
CDC42BPB-206ENST00000559790 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
CDC42BPB-206ENST00000559790 HIGD1CA8MV81 97 aa11.7□□□□□ -0.54
CDC42BPB-206ENST00000559790 TMEM191AQ9H0A3 160 aa11.7□□□□□ -0.54
CDC42BPB-206ENST00000559790 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
CDC42BPB-206ENST00000559790 RAB4AP20338 218 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms