RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 MRAP2Q96G30 205 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 TMEM191AQ9H0A3 160 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 V9GYV3 84 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 HECTD4Q9Y4D8 3996 aa2.92□□□□□ -1.94
SNX1-205ENST00000559339 TRAV8-4A0A0B4J246 113 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 SDHAF1A6NFY7 115 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 C9JQL5 133 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 F8W036 122 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 H7C423 109 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 I3L3M4 83 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 PPP1R2P9O14990 202 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 APCSP02743 223 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 PMCHP20382 165 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 RBX1P62877 108 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 SRSF3P84103 164 aaKnown RBP2.91□□□□□ -1.94
SNX1-205ENST00000559339 REG3AQ06141 175 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 ATRAIDQ6UW56 229 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 ENHOQ6UWT2 76 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 LINC00269Q8N2A0 174 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 NUP35Q8NFH5 326 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 BAALCQ8WXS3 180 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 TMEM101Q96IK0 257 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 BTF3L4Q96K17 158 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 KIR2DL4Q99706 377 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 ST20Q9HBF5 79 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 PKHD1P08F94 4074 aa2.91□□□□□ -1.94
SNX1-205ENST00000559339 DNAH6Q9C0G6 4158 aa2.9□□□□□ -1.94
SNX1-205ENST00000559339 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.9□□□□□ -1.95
SNX1-205ENST00000559339 TRBV6-5A0A0K0K1A5 114 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 SMIM27A0A1W2PRY6 76 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 LINC00862A6NCI5 91 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 VCYO14598 125 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 LECT2O14960 151 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 TCAPO15273 167 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 HLA-DQA1P01909 254 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 MT-ND4LP03901 98 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 ZNF25P17030 456 aaPredicted RBP2.9□□□□□ -1.95
SNX1-205ENST00000559339 RAB4AP20338 218 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 FCER1GP30273 86 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 CAMPP49913 170 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 HBBP68871 147 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 SMAGPQ0VAQ4 97 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 CLLU1Q5K131 121 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 RNASEKQ6P5S7 137 aaKnown RBP2.9□□□□□ -1.95
SNX1-205ENST00000559339 UQCC3Q6UW78 93 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 CLPSL2Q6UWE3 100 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 AMN1Q8IY45 258 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 MAPKAPK5-AS1Q8N8E1 139 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 DEFB104AQ8WTQ1 72 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 RPL39LQ96EH5 51 aaKnown RBP2.9□□□□□ -1.95
SNX1-205ENST00000559339 PRR34Q9NV39 138 aa2.9□□□□□ -1.95
SNX1-205ENST00000559339 IGLV10-54A0A075B6I4 117 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 TRBV27A0A0K0K1C4 114 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 C7orf77A4D0Y5 90 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 PPBPP02775 128 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 CKS2P33552 79 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 FUSP35637 526 aaKnown RBP eCLIP2.89□□□□□ -1.95
SNX1-205ENST00000559339 SUMO2P61956 95 aaKnown RBP2.89□□□□□ -1.95
SNX1-205ENST00000559339 DGAT2L7PQ6IED9 249 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 ATP5L2Q7Z4Y8 100 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 C20orf203Q8NBC4 194 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 CLRN3Q8NCR9 226 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 OR5A1Q8NGJ0 315 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 TMEM18Q96B42 140 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 RNF185Q96GF1 192 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 TMEM70Q9BUB7 260 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 DNAH2Q9P225 4427 aa2.89□□□□□ -1.95
SNX1-205ENST00000559339 FAT2Q9NYQ8 4349 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 IGLV4-60A0A075B6I1 120 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 TRBV24-1A0A075B6N3 115 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.88□□□□□ -1.95
SNX1-205ENST00000559339 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.88□□□□□ -1.95
SNX1-205ENST00000559339 IGKV3OR2-268A0A0C4DH90 116 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 IGKV2-29A2NJV5 120 aaPredicted RBP2.88□□□□□ -1.95
SNX1-205ENST00000559339 EPM2AB3EWF7 344 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 USP17L23D6RBM5 183 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 FGF6P10767 208 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 RAB5AP20339 215 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 RPS10P46783 165 aaKnown RBP2.88□□□□□ -1.95
SNX1-205ENST00000559339 POLR2KP53803 58 aaKnown RBP2.88□□□□□ -1.95
SNX1-205ENST00000559339 KRTAP10-1P60331 282 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 ANKRD39Q53RE8 183 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 FAM104BQ5XKR9 115 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 MRPL54Q6P161 138 aaKnown RBP2.88□□□□□ -1.95
SNX1-205ENST00000559339 CFAP161Q6P656 301 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 ORMDL3Q8N138 153 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 Q8N1X5 172 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 C20orf78Q9BR46 151 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 AP5S1Q9NUS5 200 aa2.88□□□□□ -1.95
SNX1-205ENST00000559339 hDV102S1A0JD36 115 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 D6R8Y8 96 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 SMKR1H3BMG3 65 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 PHOX2AO14813 284 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 CCL25O15444 150 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 GAS8-AS1O95177 125 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 TNFRSF6BO95407 300 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 TSHBP01222 138 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 S100PP25815 95 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 WFDC2Q14508 124 aa2.87□□□□□ -1.95
SNX1-205ENST00000559339 SS18Q15532 418 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms