RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 LINC00482Q8N8I6 264 aa11.47□□□□□ -0.57
USP8-208ENST00000559329 JMJD1CQ15652 2540 aa11.46□□□□□ -0.57
USP8-208ENST00000559329 NSD1Q96L73 2696 aaPredicted RBP11.46□□□□□ -0.57
USP8-208ENST00000559329 INAFM1C9JVW0 142 aa11.46□□□□□ -0.58
USP8-208ENST00000559329 GCSHP23434 173 aa11.46□□□□□ -0.58
USP8-208ENST00000559329 CEND1Q8N111 149 aa11.46□□□□□ -0.58
USP8-208ENST00000559329 CSNK1G2-AS1Q8NCQ2 148 aa11.46□□□□□ -0.58
USP8-208ENST00000559329 CHCHD7Q9BUK0 85 aa11.46□□□□□ -0.58
USP8-208ENST00000559329 NOTCH2Q04721 2471 aa11.46□□□□□ -0.58
USP8-208ENST00000559329 TRGV1A0A0A0MS02 117 aa11.45□□□□□ -0.58
USP8-208ENST00000559329 K7EP13 123 aa11.45□□□□□ -0.58
USP8-208ENST00000559329 VAMP3Q15836 100 aa11.45□□□□□ -0.58
USP8-208ENST00000559329 PLAC8L1A1L4L8 177 aa11.45□□□□□ -0.58
USP8-208ENST00000559329 PTTG1IPP53801 180 aa11.45□□□□□ -0.58
USP8-208ENST00000559329 AMELXQ99217 191 aa11.45□□□□□ -0.58
USP8-208ENST00000559329 TRBV7-3A0A075B6L6 115 aa11.44□□□□□ -0.58
USP8-208ENST00000559329 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
USP8-208ENST00000559329 CRYBA4P53673 196 aa11.44□□□□□ -0.58
USP8-208ENST00000559329 HERVK_113P61574 105 aa11.44□□□□□ -0.58
USP8-208ENST00000559329 DAZ2Q13117 558 aaKnown RBP11.44□□□□□ -0.58
USP8-208ENST00000559329 Q6ZTI0 123 aa11.44□□□□□ -0.58
USP8-208ENST00000559329 OR4C5Q8NGB2 326 aa11.44□□□□□ -0.58
USP8-208ENST00000559329 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
USP8-208ENST00000559329 AMMECR1LQ6DCA0 310 aa11.43□□□□□ -0.58
USP8-208ENST00000559329 C16orf74Q96GX8 76 aa11.43□□□□□ -0.58
USP8-208ENST00000559329 ZNF479Q96JC4 524 aa11.43□□□□□ -0.58
USP8-208ENST00000559329 C1QTNF4Q9BXJ3 329 aa11.43□□□□□ -0.58
USP8-208ENST00000559329 VCX2Q9H322 139 aa11.43□□□□□ -0.58
USP8-208ENST00000559329 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
USP8-208ENST00000559329 ZNF815PA8K554 130 aa11.42□□□□□ -0.58
USP8-208ENST00000559329 PF4P02776 101 aa11.42□□□□□ -0.58
USP8-208ENST00000559329 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
USP8-208ENST00000559329 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
USP8-208ENST00000559329 PHLDA1Q8WV24 401 aaPredicted RBP11.41□□□□□ -0.58
USP8-208ENST00000559329 SPANXA1Q9NS26 97 aa11.41□□□□□ -0.58
USP8-208ENST00000559329 UBE2D4Q9Y2X8 147 aa11.41□□□□□ -0.58
USP8-208ENST00000559329 TMEM223A0PJW6 202 aa11.41□□□□□ -0.58
USP8-208ENST00000559329 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
USP8-208ENST00000559329 C2CD3Q4AC94 2353 aa11.4□□□□□ -0.58
USP8-208ENST00000559329 FN1P02751 2386 aaKnown RBP11.4□□□□□ -0.58
USP8-208ENST00000559329 TRBV10-1A0A0K0K1A3 114 aa11.4□□□□□ -0.58
USP8-208ENST00000559329 SMIM13P0DJ93 91 aa11.4□□□□□ -0.58
USP8-208ENST00000559329 COTL1Q14019 142 aa11.4□□□□□ -0.58
USP8-208ENST00000559329 PLEKHB2Q96CS7 222 aa11.4□□□□□ -0.58
USP8-208ENST00000559329 NOP10Q9NPE3 64 aaKnown RBP11.4□□□□□ -0.58
USP8-208ENST00000559329 IGHV3-38A0A0C4DH36 116 aa11.39□□□□□ -0.59
USP8-208ENST00000559329 A0A0J9YXV3 536 aa11.39□□□□□ -0.59
USP8-208ENST00000559329 CEMP1Q6PRD7 247 aaPredicted RBP11.39□□□□□ -0.59
USP8-208ENST00000559329 HIST1H4GQ99525 98 aa11.39□□□□□ -0.59
USP8-208ENST00000559329 OVOL2Q9BRP0 275 aa11.39□□□□□ -0.59
USP8-208ENST00000559329 K7EQD1 137 aa11.39□□□□□ -0.59
USP8-208ENST00000559329 FOSL1P15407 271 aa11.39□□□□□ -0.59
USP8-208ENST00000559329 MRPS36P82909 103 aaKnown RBP11.39□□□□□ -0.59
USP8-208ENST00000559329 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.38□□□□□ -0.59
USP8-208ENST00000559329 IGKV2-29A2NJV5 120 aaPredicted RBP11.38□□□□□ -0.59
USP8-208ENST00000559329 H3BUT2 72 aa11.38□□□□□ -0.59
USP8-208ENST00000559329 RAB37Q96AX2 223 aa11.38□□□□□ -0.59
USP8-208ENST00000559329 HIVEP1P15822 2718 aa11.38□□□□□ -0.59
USP8-208ENST00000559329 K7ERJ3 54 aa11.37□□□□□ -0.59
USP8-208ENST00000559329 NHP2Q9NX24 153 aaKnown RBP11.37□□□□□ -0.59
USP8-208ENST00000559329 A0A0J9YY99 117 aa11.37□□□□□ -0.59
USP8-208ENST00000559329 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
USP8-208ENST00000559329 J3QQQ9 107 aa11.37□□□□□ -0.59
USP8-208ENST00000559329 RRN3P1Q2M238 152 aa11.37□□□□□ -0.59
USP8-208ENST00000559329 SLC25A29Q8N8R3 303 aa11.37□□□□□ -0.59
USP8-208ENST00000559329 OR5A1Q8NGJ0 315 aa11.37□□□□□ -0.59
USP8-208ENST00000559329 SPATA3Q8NHX4 192 aa11.37□□□□□ -0.59
USP8-208ENST00000559329 LEPROTO15243 131 aa11.36□□□□□ -0.59
USP8-208ENST00000559329 INSL3P51460 131 aa11.36□□□□□ -0.59
USP8-208ENST00000559329 SCGB1D4Q6XE38 83 aa11.36□□□□□ -0.59
USP8-208ENST00000559329 NAA38Q9BRA0 125 aaKnown RBP11.36□□□□□ -0.59
USP8-208ENST00000559329 TIMM21Q9BVV7 248 aa11.36□□□□□ -0.59
USP8-208ENST00000559329 A0A1W2PPM0 123 aa11.35□□□□□ -0.59
USP8-208ENST00000559329 CRLF1O75462 422 aa11.35□□□□□ -0.59
USP8-208ENST00000559329 UBE2D3P61077 147 aa11.35□□□□□ -0.59
USP8-208ENST00000559329 UBE2D2P62837 147 aa11.35□□□□□ -0.59
USP8-208ENST00000559329 RPL36AP83881 106 aaKnown RBP11.35□□□□□ -0.59
USP8-208ENST00000559329 Q6ZUT4 128 aa11.35□□□□□ -0.59
USP8-208ENST00000559329 RPL36ALQ969Q0 106 aaKnown RBP11.35□□□□□ -0.59
USP8-208ENST00000559329 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
USP8-208ENST00000559329 GAGE12BA1L429 117 aa11.34□□□□□ -0.59
USP8-208ENST00000559329 K7EP34 96 aa11.34□□□□□ -0.59
USP8-208ENST00000559329 CIDEAO60543 219 aa11.34□□□□□ -0.59
USP8-208ENST00000559329 GAGE7O76087 117 aa11.34□□□□□ -0.59
USP8-208ENST00000559329 GAGE12FP0CL80 117 aa11.34□□□□□ -0.59
USP8-208ENST00000559329 GAGE12GP0CL81 117 aa11.34□□□□□ -0.59
USP8-208ENST00000559329 GAGE12IP0CL82 117 aa11.34□□□□□ -0.59
USP8-208ENST00000559329 RNASE13Q5GAN3 156 aaKnown RBP11.34□□□□□ -0.59
USP8-208ENST00000559329 DAZ4Q86SG3 579 aaKnown RBP11.34□□□□□ -0.59
USP8-208ENST00000559329 DAZ3Q9NR90 486 aaKnown RBP11.34□□□□□ -0.59
USP8-208ENST00000559329 NOTCH3Q9UM47 2321 aa11.34□□□□□ -0.59
USP8-208ENST00000559329 VWFP04275 2813 aa11.34□□□□□ -0.59
USP8-208ENST00000559329 TINCRA0A1B0GVN0 87 aa11.33□□□□□ -0.6
USP8-208ENST00000559329 NTM-AS1Q6ZSK4 140 aa11.33□□□□□ -0.6
USP8-208ENST00000559329 SPANXB1Q9NS25 103 aaPredicted RBP11.33□□□□□ -0.6
USP8-208ENST00000559329 LGALS3P17931 250 aaKnown RBP11.33□□□□□ -0.6
USP8-208ENST00000559329 C9orf66Q5T8R8 295 aa11.33□□□□□ -0.6
USP8-208ENST00000559329 SBSPONQ8IVN8 264 aa11.33□□□□□ -0.6
USP8-208ENST00000559329 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
USP8-208ENST00000559329 GAGE10A6NGK3 116 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms