RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 ATP5G1P05496 136 aa6.57□□□□□ -1.36
EXD1-204ENST00000558881 RPS28P62857 69 aaKnown RBP6.57□□□□□ -1.36
EXD1-204ENST00000558881 PMVKQ15126 192 aa6.57□□□□□ -1.36
EXD1-204ENST00000558881 FAM223AQ8IWN6 122 aa6.57□□□□□ -1.36
EXD1-204ENST00000558881 LINC00526Q96FQ7 95 aa6.57□□□□□ -1.36
EXD1-204ENST00000558881 PTPN13Q12923 2485 aa6.57□□□□□ -1.36
EXD1-204ENST00000558881 ANKRD17O75179 2603 aaKnown RBP6.56□□□□□ -1.36
EXD1-204ENST00000558881 TRAV25A0A0B4J276 109 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 LOC107984640A0A0U1RRK4 108 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 IGIPA6NJ69 53 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
EXD1-204ENST00000558881 Q1RN00 199 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 FAM19A5Q7Z5A7 132 aaPredicted RBP6.56□□□□□ -1.36
EXD1-204ENST00000558881 C14orf178Q8N769 122 aaPredicted RBP6.56□□□□□ -1.36
EXD1-204ENST00000558881 PLA2G2DQ9UNK4 145 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 TRGV11A0A075B6L2 103 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 H7C2G1 150 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 TRIAP1O43715 76 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 PPP1R17O96001 155 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 FSHBP01225 129 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 PLA2G2AP14555 144 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 HERVK_113P63121 156 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 UNQ9165/PRO28630Q6UXU0 137 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 RPL39LQ96EH5 51 aaKnown RBP6.56□□□□□ -1.36
EXD1-204ENST00000558881 METTL26Q96S19 204 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 AGPAT4-IT1Q9H0P7 198 aa6.56□□□□□ -1.36
EXD1-204ENST00000558881 ABCA12Q86UK0 2595 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 APCP25054 2843 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 ACYP1P07311 99 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 EMP1P54849 157 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 CFHR3Q02985 330 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 ZNF876PQ49A33 203 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 C10orf99Q6UWK7 81 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 MUSTN1Q8IVN3 82 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 TMEM141Q96I45 108 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 DPH3P1Q9H4G8 78 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 CHD6Q8TD26 2715 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 ZNF469Q96JG9 3925 aaPredicted RBP6.55□□□□□ -1.36
EXD1-204ENST00000558881 A0A0J9YX75 114 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 ZNRF2Q8NHG8 242 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 TIMM17AQ99595 171 aa6.55□□□□□ -1.36
EXD1-204ENST00000558881 TMEM223A0PJW6 202 aa6.54□□□□□ -1.36
EXD1-204ENST00000558881 H3BUA1 57 aa6.54□□□□□ -1.36
EXD1-204ENST00000558881 J3QKU1 62 aa6.54□□□□□ -1.36
EXD1-204ENST00000558881 Q6YL49 198 aa6.54□□□□□ -1.36
EXD1-204ENST00000558881 RNF182Q8N6D2 247 aa6.54□□□□□ -1.36
EXD1-204ENST00000558881 WFDC11Q8NEX6 87 aa6.54□□□□□ -1.36
EXD1-204ENST00000558881 USMG5Q96IX5 58 aa6.54□□□□□ -1.36
EXD1-204ENST00000558881 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.54□□□□□ -1.36
EXD1-204ENST00000558881 CSPG4Q6UVK1 2322 aa6.54□□□□□ -1.36
EXD1-204ENST00000558881 NAV2Q8IVL1 2488 aa6.54□□□□□ -1.36
EXD1-204ENST00000558881 SDHAF1A6NFY7 115 aa6.53□□□□□ -1.36
EXD1-204ENST00000558881 LEPROTO15243 131 aa6.53□□□□□ -1.36
EXD1-204ENST00000558881 MRPL53Q96EL3 112 aaKnown RBP6.53□□□□□ -1.36
EXD1-204ENST00000558881 DUX3Q96PT4 197 aa6.53□□□□□ -1.36
EXD1-204ENST00000558881 TP53TG1Q9Y2A0 90 aa6.53□□□□□ -1.36
EXD1-204ENST00000558881 RNASE1P07998 156 aaKnown RBP6.53□□□□□ -1.36
EXD1-204ENST00000558881 CEMP1Q6PRD7 247 aaPredicted RBP6.53□□□□□ -1.36
EXD1-204ENST00000558881 C9orf47Q6ZRZ4 202 aa6.53□□□□□ -1.36
EXD1-204ENST00000558881 GPHB5Q86YW7 130 aa6.53□□□□□ -1.36
EXD1-204ENST00000558881 OR13C6PQ8NH95 151 aa6.53□□□□□ -1.36
EXD1-204ENST00000558881 KMT2BQ9UMN6 2715 aaPredicted RBP6.53□□□□□ -1.36
EXD1-204ENST00000558881 LST1O00453 97 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 COX6CP09669 75 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 ZNF22P17026 224 aaPredicted RBP6.52□□□□□ -1.37
EXD1-204ENST00000558881 C9orf139Q6ZV77 190 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 DUX5Q96PT3 197 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 ICOSQ9Y6W8 199 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 CR1P17927 2039 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 MXRA5Q9NR99 2828 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 NDUFA4O00483 81 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 CRYGAP11844 174 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
EXD1-204ENST00000558881 CITED2Q99967 270 aaPredicted RBP6.52□□□□□ -1.37
EXD1-204ENST00000558881 IGHV4OR15-8A0A075B7B6 117 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 A0A087WW49 117 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 COX7CP15954 63 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 EDN2P20800 178 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 PSMB8P28062 276 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 SDIM1Q6ZPB5 146 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 TEX15Q9BXT5 2789 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 PRRC2AP48634 2157 aaKnown RBP6.51□□□□□ -1.37
EXD1-204ENST00000558881 MED14OSP0DP75 135 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 CXCL5P42830 114 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 ZNF702PQ9H963 129 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 KLK5Q9Y337 293 aaPredicted RBP6.51□□□□□ -1.37
EXD1-204ENST00000558881 LENEPQ9Y5L5 61 aa6.51□□□□□ -1.37
EXD1-204ENST00000558881 POLR2KP53803 58 aaKnown RBP6.5□□□□□ -1.37
EXD1-204ENST00000558881 ZNF580Q9UK33 172 aa6.5□□□□□ -1.37
EXD1-204ENST00000558881 A0A0J9YXY3 114 aa6.5□□□□□ -1.37
EXD1-204ENST00000558881 C5orf38Q86SI9 138 aa6.5□□□□□ -1.37
EXD1-204ENST00000558881 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
EXD1-204ENST00000558881 ZNF256Q9Y2P7 627 aaPredicted RBP6.5□□□□□ -1.37
EXD1-204ENST00000558881 PHLDA3Q9Y5J5 127 aa6.5□□□□□ -1.37
EXD1-204ENST00000558881 MGPP08493 103 aa6.49□□□□□ -1.37
EXD1-204ENST00000558881 RPL39P62891 51 aaKnown RBP6.49□□□□□ -1.37
EXD1-204ENST00000558881 PRR9Q5T870 116 aa6.49□□□□□ -1.37
EXD1-204ENST00000558881 GAGE2AQ6NT46 116 aa6.49□□□□□ -1.37
EXD1-204ENST00000558881 SMCR5Q8TEV8 140 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms