RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 BCL2P10415 239 aa7.4□□□□□ -1.22
CASC4-205ENST00000558735 TCTE3Q8IZS6 198 aa7.4□□□□□ -1.22
CASC4-205ENST00000558735 CLRN3Q8NCR9 226 aa7.4□□□□□ -1.22
CASC4-205ENST00000558735 TMEM243Q9BU79 118 aa7.4□□□□□ -1.22
CASC4-205ENST00000558735 DPH3P1Q9H4G8 78 aa7.4□□□□□ -1.22
CASC4-205ENST00000558735 BIN3Q9NQY0 253 aa7.4□□□□□ -1.22
CASC4-205ENST00000558735 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
CASC4-205ENST00000558735 TRAV8-4A0A0B4J246 113 aa7.39□□□□□ -1.23
CASC4-205ENST00000558735 SLPIP03973 132 aa7.39□□□□□ -1.23
CASC4-205ENST00000558735 SLC51BQ86UW2 128 aa7.39□□□□□ -1.23
CASC4-205ENST00000558735 PGLYRP4Q96LB8 373 aa7.39□□□□□ -1.23
CASC4-205ENST00000558735 LRP2P98164 4655 aa7.39□□□□□ -1.23
CASC4-205ENST00000558735 K7EN84 100 aa7.38□□□□□ -1.23
CASC4-205ENST00000558735 CTRLP40313 264 aa7.38□□□□□ -1.23
CASC4-205ENST00000558735 TWIST1Q15672 202 aa7.38□□□□□ -1.23
CASC4-205ENST00000558735 GATD1Q8NB37 220 aa7.38□□□□□ -1.23
CASC4-205ENST00000558735 CNFNQ9BYD5 112 aa7.38□□□□□ -1.23
CASC4-205ENST00000558735 RNASE7Q9H1E1 156 aaKnown RBP7.38□□□□□ -1.23
CASC4-205ENST00000558735 FOXA3P55318 350 aaPredicted RBP7.37□□□□□ -1.23
CASC4-205ENST00000558735 COTL1Q14019 142 aa7.37□□□□□ -1.23
CASC4-205ENST00000558735 GTSF1Q8WW33 167 aa7.37□□□□□ -1.23
CASC4-205ENST00000558735 TRAV26-2A0A0B4J265 109 aa7.36□□□□□ -1.23
CASC4-205ENST00000558735 hDV102S1A0JD36 115 aa7.36□□□□□ -1.23
CASC4-205ENST00000558735 TAGLN2P37802 199 aaKnown RBP7.36□□□□□ -1.23
CASC4-205ENST00000558735 HNRNPA3P51991 378 aaKnown RBP7.36□□□□□ -1.23
CASC4-205ENST00000558735 RPL37AP61513 92 aaKnown RBP7.36□□□□□ -1.23
CASC4-205ENST00000558735 CNBPP62633 177 aaKnown RBP7.36□□□□□ -1.23
CASC4-205ENST00000558735 RPP21Q9H633 154 aaKnown RBP7.36□□□□□ -1.23
CASC4-205ENST00000558735 UBE2L6O14933 153 aa7.35□□□□□ -1.23
CASC4-205ENST00000558735 AMTP48728 403 aa7.35□□□□□ -1.23
CASC4-205ENST00000558735 CIRBPQ14011 172 aaKnown RBP7.35□□□□□ -1.23
CASC4-205ENST00000558735 TNXBP22105 4242 aa7.35□□□□□ -1.23
CASC4-205ENST00000558735 MT1HL1P0DM35 61 aa7.34□□□□□ -1.23
CASC4-205ENST00000558735 Q6ZNX1 250 aa7.34□□□□□ -1.23
CASC4-205ENST00000558735 RPL39LQ96EH5 51 aaKnown RBP7.34□□□□□ -1.23
CASC4-205ENST00000558735 LYPD6BQ8NI32 183 aa7.33□□□□□ -1.24
CASC4-205ENST00000558735 DPH3Q96FX2 82 aa7.33□□□□□ -1.24
CASC4-205ENST00000558735 AP5S1Q9NUS5 200 aa7.33□□□□□ -1.24
CASC4-205ENST00000558735 IGHV3-64A0A075B6Q5 118 aa7.32□□□□□ -1.24
CASC4-205ENST00000558735 FAM231BA6NCW3 169 aa7.32□□□□□ -1.24
CASC4-205ENST00000558735 GAGE12HA6NDE8 117 aa7.32□□□□□ -1.24
CASC4-205ENST00000558735 TMEM250H0YL14 139 aa7.32□□□□□ -1.24
CASC4-205ENST00000558735 GATCO43716 136 aaKnown RBP7.32□□□□□ -1.24
CASC4-205ENST00000558735 BLOC1S1P78537 153 aa7.32□□□□□ -1.24
CASC4-205ENST00000558735 ALKAL2Q6UX46 152 aa7.32□□□□□ -1.24
CASC4-205ENST00000558735 FAM231DQ6ZW35 169 aa7.32□□□□□ -1.24
CASC4-205ENST00000558735 C15orf56Q8N910 161 aa7.32□□□□□ -1.24
CASC4-205ENST00000558735 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.31□□□□□ -1.24
CASC4-205ENST00000558735 A0A087WYN8 130 aa7.31□□□□□ -1.24
CASC4-205ENST00000558735 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.31□□□□□ -1.24
CASC4-205ENST00000558735 IGKV3OR2-268A0A0C4DH90 116 aa7.31□□□□□ -1.24
CASC4-205ENST00000558735 IGKV2-29A2NJV5 120 aaPredicted RBP7.31□□□□□ -1.24
CASC4-205ENST00000558735 SDHAF1A6NFY7 115 aa7.31□□□□□ -1.24
CASC4-205ENST00000558735 A8MWL6 223 aa7.31□□□□□ -1.24
CASC4-205ENST00000558735 GAS8-AS1O95177 125 aa7.31□□□□□ -1.24
CASC4-205ENST00000558735 NCR2O95944 276 aa7.31□□□□□ -1.24
CASC4-205ENST00000558735 CHTF8P0CG12 524 aa7.31□□□□□ -1.24
CASC4-205ENST00000558735 TEX261Q6UWH6 196 aa7.31□□□□□ -1.24
CASC4-205ENST00000558735 SMIM15Q7Z3B0 74 aa7.31□□□□□ -1.24
CASC4-205ENST00000558735 H7C423 109 aa7.3□□□□□ -1.24
CASC4-205ENST00000558735 FGF6P10767 208 aa7.3□□□□□ -1.24
CASC4-205ENST00000558735 PMCHP20382 165 aa7.3□□□□□ -1.24
CASC4-205ENST00000558735 AMMECR1LQ6DCA0 310 aa7.3□□□□□ -1.24
CASC4-205ENST00000558735 RNASEKQ6P5S7 137 aaKnown RBP7.3□□□□□ -1.24
CASC4-205ENST00000558735 CFAP161Q6P656 301 aa7.3□□□□□ -1.24
CASC4-205ENST00000558735 CHCHD10Q8WYQ3 142 aaPredicted RBP7.3□□□□□ -1.24
CASC4-205ENST00000558735 RNF185Q96GF1 192 aa7.3□□□□□ -1.24
CASC4-205ENST00000558735 TRBV6-5A0A0K0K1A5 114 aa7.29□□□□□ -1.24
CASC4-205ENST00000558735 RPS10P46783 165 aaKnown RBP7.29□□□□□ -1.24
CASC4-205ENST00000558735 COX6A2Q02221 97 aa7.29□□□□□ -1.24
CASC4-205ENST00000558735 PRSS3P2Q8NHM4 247 aa7.29□□□□□ -1.24
CASC4-205ENST00000558735 SPACA4Q8TDM5 124 aa7.29□□□□□ -1.24
CASC4-205ENST00000558735 I3L3M4 83 aa7.28□□□□□ -1.24
CASC4-205ENST00000558735 APCSP02743 223 aa7.28□□□□□ -1.24
CASC4-205ENST00000558735 ESDP10768 282 aa7.28□□□□□ -1.24
CASC4-205ENST00000558735 CEBPGP53567 150 aa7.28□□□□□ -1.24
CASC4-205ENST00000558735 POLR2KP53803 58 aaKnown RBP7.28□□□□□ -1.24
CASC4-205ENST00000558735 FOXI1Q12951 378 aa7.28□□□□□ -1.24
CASC4-205ENST00000558735 HIGD2BQ4VC39 106 aa7.28□□□□□ -1.24
CASC4-205ENST00000558735 CT83Q5H943 113 aa7.28□□□□□ -1.24
CASC4-205ENST00000558735 AKAP14Q86UN6 197 aa7.28□□□□□ -1.24
CASC4-205ENST00000558735 PLAC8Q9NZF1 115 aa7.28□□□□□ -1.24
CASC4-205ENST00000558735 TSHBP01222 138 aa7.27□□□□□ -1.25
CASC4-205ENST00000558735 RAB4AP20338 218 aa7.27□□□□□ -1.25
CASC4-205ENST00000558735 Q6ZRU5 148 aa7.27□□□□□ -1.25
CASC4-205ENST00000558735 LINC01551Q86U37 167 aa7.27□□□□□ -1.25
CASC4-205ENST00000558735 OR5A1Q8NGJ0 315 aa7.27□□□□□ -1.25
CASC4-205ENST00000558735 TMEM191AQ9H0A3 160 aa7.27□□□□□ -1.25
CASC4-205ENST00000558735 hCG_2014768A0A024R1R8 64 aa7.26□□□□□ -1.25
CASC4-205ENST00000558735 GVQW2A0A096LPI5 108 aaPredicted RBP7.26□□□□□ -1.25
CASC4-205ENST00000558735 LINC00959A0A1B0GUT2 108 aa7.26□□□□□ -1.25
CASC4-205ENST00000558735 A0A1B0GUT8 65 aa7.26□□□□□ -1.25
CASC4-205ENST00000558735 HIGD1CA8MV81 97 aa7.26□□□□□ -1.25
CASC4-205ENST00000558735 NDUFS6O75380 124 aaKnown RBP7.26□□□□□ -1.25
CASC4-205ENST00000558735 ZNF25P17030 456 aaPredicted RBP7.26□□□□□ -1.25
CASC4-205ENST00000558735 TSKUQ8WUA8 353 aa7.26□□□□□ -1.25
CASC4-205ENST00000558735 SMIM7Q9BQ49 75 aa7.26□□□□□ -1.25
CASC4-205ENST00000558735 EIF5A2Q9GZV4 153 aaKnown RBP7.26□□□□□ -1.25
CASC4-205ENST00000558735 ST20Q9HBF5 79 aa7.26□□□□□ -1.25
CASC4-205ENST00000558735 OSTCQ9NRP0 149 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms