RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 FAM19A3Q7Z5A8 133 aa11.85□□□□□ -0.51
HMBOX1-212ENST00000558662 SIRPDQ9H106 197 aa11.85□□□□□ -0.51
HMBOX1-212ENST00000558662 K7EMT4 169 aa11.84□□□□□ -0.51
HMBOX1-212ENST00000558662 BCE1O60756 84 aa11.84□□□□□ -0.51
HMBOX1-212ENST00000558662 C5orf56Q8N8D9 126 aa11.84□□□□□ -0.51
HMBOX1-212ENST00000558662 DEFB124Q8NES8 71 aa11.84□□□□□ -0.51
HMBOX1-212ENST00000558662 UBE2D4Q9Y2X8 147 aa11.84□□□□□ -0.51
HMBOX1-212ENST00000558662 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
HMBOX1-212ENST00000558662 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.84□□□□□ -0.51
HMBOX1-212ENST00000558662 SYNJ2BPP57105 145 aa11.84□□□□□ -0.51
HMBOX1-212ENST00000558662 NPC2P61916 151 aa11.84□□□□□ -0.51
HMBOX1-212ENST00000558662 TRAV12-3A0A0B4J271 114 aa11.83□□□□□ -0.52
HMBOX1-212ENST00000558662 F6UB75 175 aa11.83□□□□□ -0.52
HMBOX1-212ENST00000558662 H0YGX0 51 aa11.83□□□□□ -0.52
HMBOX1-212ENST00000558662 Q5XG85 94 aa11.83□□□□□ -0.52
HMBOX1-212ENST00000558662 FREM2Q5SZK8 3169 aa11.83□□□□□ -0.52
HMBOX1-212ENST00000558662 USP17L23D6RBM5 183 aa11.82□□□□□ -0.52
HMBOX1-212ENST00000558662 KLRB1Q12918 225 aa11.82□□□□□ -0.52
HMBOX1-212ENST00000558662 UNQ9165/PRO28630Q6UXU0 137 aa11.82□□□□□ -0.52
HMBOX1-212ENST00000558662 DEFB104AQ8WTQ1 72 aa11.82□□□□□ -0.52
HMBOX1-212ENST00000558662 RHPN1-AS1Q9BWJ2 59 aa11.82□□□□□ -0.52
HMBOX1-212ENST00000558662 MOB4Q9Y3A3 225 aa11.82□□□□□ -0.52
HMBOX1-212ENST00000558662 PSMB8P28062 276 aa11.81□□□□□ -0.52
HMBOX1-212ENST00000558662 CHCHD7Q9BUK0 85 aa11.8□□□□□ -0.52
HMBOX1-212ENST00000558662 ABCA4P78363 2273 aa11.79□□□□□ -0.52
HMBOX1-212ENST00000558662 Q9H8V8 135 aa11.79□□□□□ -0.52
HMBOX1-212ENST00000558662 PKDREJQ9NTG1 2253 aa11.79□□□□□ -0.52
HMBOX1-212ENST00000558662 TRBV10-3A0A0K0K1G6 114 aa11.78□□□□□ -0.52
HMBOX1-212ENST00000558662 CDKN2A-AS1Q9UH64 79 aa11.78□□□□□ -0.52
HMBOX1-212ENST00000558662 PRO0628Q9UI54 55 aa11.78□□□□□ -0.52
HMBOX1-212ENST00000558662 EPM2AB3EWF7 344 aa11.77□□□□□ -0.52
HMBOX1-212ENST00000558662 DEFB1P60022 68 aa11.77□□□□□ -0.52
HMBOX1-212ENST00000558662 Q8N2B8 174 aa11.77□□□□□ -0.53
HMBOX1-212ENST00000558662 NACAE9PAV3 2078 aa11.76□□□□□ -0.53
HMBOX1-212ENST00000558662 CRPP02741 224 aa11.76□□□□□ -0.53
HMBOX1-212ENST00000558662 SNRPD3P62318 126 aaKnown RBP11.76□□□□□ -0.53
HMBOX1-212ENST00000558662 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
HMBOX1-212ENST00000558662 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
HMBOX1-212ENST00000558662 DSCR8Q96T75 97 aa11.76□□□□□ -0.53
HMBOX1-212ENST00000558662 CYSTM1Q9H1C7 97 aa11.76□□□□□ -0.53
HMBOX1-212ENST00000558662 SERP1Q9Y6X1 66 aa11.76□□□□□ -0.53
HMBOX1-212ENST00000558662 ROS1P08922 2347 aa11.75□□□□□ -0.53
HMBOX1-212ENST00000558662 ZZEF1O43149 2961 aa11.75□□□□□ -0.53
HMBOX1-212ENST00000558662 MUC6Q6W4X9 2439 aa11.75□□□□□ -0.53
HMBOX1-212ENST00000558662 IGHG2P01859 326 aa11.75□□□□□ -0.53
HMBOX1-212ENST00000558662 C4orf26Q17RF5 130 aa11.75□□□□□ -0.53
HMBOX1-212ENST00000558662 FAM218AQ96MZ4 157 aa11.75□□□□□ -0.53
HMBOX1-212ENST00000558662 DSPP15924 2871 aaKnown RBP11.75□□□□□ -0.53
HMBOX1-212ENST00000558662 A8MZ25 164 aa11.74□□□□□ -0.53
HMBOX1-212ENST00000558662 OXTP01178 125 aa11.74□□□□□ -0.53
HMBOX1-212ENST00000558662 SAA4P35542 130 aa11.74□□□□□ -0.53
HMBOX1-212ENST00000558662 FBXL19-AS1Q494R0 122 aa11.74□□□□□ -0.53
HMBOX1-212ENST00000558662 SOSTDC1Q6X4U4 206 aa11.74□□□□□ -0.53
HMBOX1-212ENST00000558662 EP300Q09472 2414 aaPredicted RBP11.74□□□□□ -0.53
HMBOX1-212ENST00000558662 TRAV12-2A0A075B6T6 113 aa11.74□□□□□ -0.53
HMBOX1-212ENST00000558662 HRCT1Q6UXD1 115 aa11.74□□□□□ -0.53
HMBOX1-212ENST00000558662 LINC00846Q9NV44 126 aa11.73□□□□□ -0.53
HMBOX1-212ENST00000558662 ZNF292O60281 2723 aa11.73□□□□□ -0.53
HMBOX1-212ENST00000558662 POLEQ07864 2286 aa11.71□□□□□ -0.53
HMBOX1-212ENST00000558662 IGKV3D-7A0A0C4DH55 119 aa11.71□□□□□ -0.54
HMBOX1-212ENST00000558662 SMIM1B2RUZ4 78 aa11.71□□□□□ -0.54
HMBOX1-212ENST00000558662 TRBV12-3P01733 135 aa11.71□□□□□ -0.54
HMBOX1-212ENST00000558662 DGAT2L7PQ6IED9 249 aa11.71□□□□□ -0.54
HMBOX1-212ENST00000558662 FAM236DA0A1B0GTK5 79 aa11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 RBMY1BA6NDE4 496 aaKnown RBP11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 RBMY1EA6NEQ0 496 aaKnown RBP11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 JMJD7-PLA2G4BH0Y9G9 81 aa11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 CCKP06307 115 aa11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 RBMY1DP0C7P1 496 aaKnown RBP11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 RBMY1A1P0DJD3 496 aaKnown RBP11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 RBMY1CP0DJD4 496 aa11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 FAM236CP0DP71 79 aa11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 RBMY1FQ15415 496 aaKnown RBP11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 C11orf71Q6IPW1 123 aa11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 LYPD5Q6UWN5 251 aa11.7□□□□□ -0.54
HMBOX1-212ENST00000558662 LINC00467Q9BRT7 94 aa11.69□□□□□ -0.54
HMBOX1-212ENST00000558662 ZFP36P26651 326 aaKnown RBP11.69□□□□□ -0.54
HMBOX1-212ENST00000558662 RNASE13Q5GAN3 156 aaKnown RBP11.69□□□□□ -0.54
HMBOX1-212ENST00000558662 LINC00242Q5T6M2 205 aa11.69□□□□□ -0.54
HMBOX1-212ENST00000558662 C14orf132Q9NPU4 83 aa11.69□□□□□ -0.54
HMBOX1-212ENST00000558662 IGHV3-53P01767 116 aa11.68□□□□□ -0.54
HMBOX1-212ENST00000558662 PFN2P35080 140 aa11.68□□□□□ -0.54
HMBOX1-212ENST00000558662 TMEM243Q9BU79 118 aa11.68□□□□□ -0.54
HMBOX1-212ENST00000558662 K7EQG2 157 aa11.67□□□□□ -0.54
HMBOX1-212ENST00000558662 FHL2Q14192 279 aa11.67□□□□□ -0.54
HMBOX1-212ENST00000558662 Q9HAA7 133 aa11.67□□□□□ -0.54
HMBOX1-212ENST00000558662 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.67□□□□□ -0.54
HMBOX1-212ENST00000558662 IGKV2-29A2NJV5 120 aaPredicted RBP11.67□□□□□ -0.54
HMBOX1-212ENST00000558662 F8WDY8 70 aa11.67□□□□□ -0.54
HMBOX1-212ENST00000558662 GHRHP01286 108 aa11.67□□□□□ -0.54
HMBOX1-212ENST00000558662 TPRP12270 2363 aaKnown RBP11.67□□□□□ -0.54
HMBOX1-212ENST00000558662 GVINP1Q7Z2Y8 2422 aa11.66□□□□□ -0.54
HMBOX1-212ENST00000558662 IGKV3-7A0A075B6H7 116 aa11.66□□□□□ -0.54
HMBOX1-212ENST00000558662 IGHV3OR16-12A0A075B7B8 117 aa11.66□□□□□ -0.54
HMBOX1-212ENST00000558662 PRRC2CQ9Y520 2896 aaKnown RBP11.65□□□□□ -0.55
HMBOX1-212ENST00000558662 ATP5EP56381 51 aaPredicted RBP11.64□□□□□ -0.55
HMBOX1-212ENST00000558662 ORMDL1Q9P0S3 153 aa11.64□□□□□ -0.55
HMBOX1-212ENST00000558662 CELSR3Q9NYQ7 3312 aa11.64□□□□□ -0.55
HMBOX1-212ENST00000558662 A0A087WVE0 104 aa11.64□□□□□ -0.55
HMBOX1-212ENST00000558662 A8MTW9 85 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms