RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 SDHAF1A6NFY7 115 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 H3BVH4 76 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 PF4P02776 101 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 CFC1BP0CG36 223 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 CFC1P0CG37 223 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 MFAP4P55083 255 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 EGFEM1PQ0D2K5 195 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 DEFB121Q5J5C9 76 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 KHDC1LQ5JSQ8 128 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 MAPKAPK5-AS1Q8N8E1 139 aa6.01□□□□□ -1.45
RTF1-205ENST00000558298 C9JAW5 83 aa6□□□□□ -1.45
RTF1-205ENST00000558298 LGALS9O00182 355 aa6□□□□□ -1.45
RTF1-205ENST00000558298 IGKV1-17P01599 117 aa6□□□□□ -1.45
RTF1-205ENST00000558298 TRGV3P03979 118 aa6□□□□□ -1.45
RTF1-205ENST00000558298 SUMO2P61956 95 aaKnown RBP6□□□□□ -1.45
RTF1-205ENST00000558298 ERCC8Q13216 396 aa6□□□□□ -1.45
RTF1-205ENST00000558298 PMVKQ15126 192 aa6□□□□□ -1.45
RTF1-205ENST00000558298 NRACQ8N912 160 aa6□□□□□ -1.45
RTF1-205ENST00000558298 C15orf53Q8NAA6 179 aa6□□□□□ -1.45
RTF1-205ENST00000558298 PLEKHB2Q96CS7 222 aa6□□□□□ -1.45
RTF1-205ENST00000558298 TIMM17AQ99595 171 aa6□□□□□ -1.45
RTF1-205ENST00000558298 SELENOKQ9Y6D0 94 aa6□□□□□ -1.45
RTF1-205ENST00000558298 SORL1Q92673 2214 aa6□□□□□ -1.45
RTF1-205ENST00000558298 TRBV7-1A0A0A6YYK4 115 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 A0A0J9YY99 117 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 IGHV3-30P01768 117 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 IGHV3-30-5P0DP03 117 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 LGALS3P17931 250 aaKnown RBP5.99□□□□□ -1.45
RTF1-205ENST00000558298 C15orf32Q32M92 178 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 LINC01620Q4KN68 170 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 SPANXN1Q5VSR9 72 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 FAM159AQ6UWV7 190 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 C18orf65Q6ZTR6 163 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 Q8N1Y9 231 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 RASL10AQ92737 203 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 DPH3P1Q9H4G8 78 aa5.99□□□□□ -1.45
RTF1-205ENST00000558298 MRPL36Q9P0J6 103 aaKnown RBP5.99□□□□□ -1.45
RTF1-205ENST00000558298 ZNF256Q9Y2P7 627 aaPredicted RBP5.99□□□□□ -1.45
RTF1-205ENST00000558298 TMSB15BA0A087X1C1 80 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 A0A1W2PRX2 142 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 SMKR1H3BMG3 65 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 CCDC179H3BU77 68 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 C9orf66Q5T8R8 295 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 C3orf22Q8N5N4 141 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 EEF1AKMT3Q96AZ1 226 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 LINC00526Q96FQ7 95 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 CCDC140Q96MF4 163 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 C8orf49Q96NF6 230 aa5.98□□□□□ -1.45
RTF1-205ENST00000558298 IGHV4OR15-8A0A075B7B6 117 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 A0A087WW49 117 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 TRAV4A0A0B4J268 109 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 K7EIM0 57 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 IGHV3-33P01772 117 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 HOXD3P31249 432 aaPredicted RBP5.97□□□□□ -1.45
RTF1-205ENST00000558298 DEFB136Q30KP8 78 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 OXLD1Q5BKU9 147 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 C2orf66Q6UXQ4 117 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 ZFP2Q6ZN57 461 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 GPHB5Q86YW7 130 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 MRAPQ8TCY5 172 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 BAALCQ8WXS3 180 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 KIR2DL4Q99706 377 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 TTTY13Q9BZ97 58 aa5.97□□□□□ -1.45
RTF1-205ENST00000558298 F8W735 103 aaPredicted RBP5.96□□□□□ -1.46
RTF1-205ENST00000558298 H3BTX0 84 aa5.96□□□□□ -1.46
RTF1-205ENST00000558298 ATOX1O00244 68 aa5.96□□□□□ -1.46
RTF1-205ENST00000558298 OVOL1O14753 267 aa5.96□□□□□ -1.46
RTF1-205ENST00000558298 LEPROTO15243 131 aa5.96□□□□□ -1.46
RTF1-205ENST00000558298 Q1RN00 199 aa5.96□□□□□ -1.46
RTF1-205ENST00000558298 C9orf153Q5TBE3 101 aa5.96□□□□□ -1.46
RTF1-205ENST00000558298 C2orf82Q6UX34 121 aa5.96□□□□□ -1.46
RTF1-205ENST00000558298 WFDC3Q8IUB2 231 aa5.96□□□□□ -1.46
RTF1-205ENST00000558298 NTN5Q8WTR8 489 aaPredicted RBP5.96□□□□□ -1.46
RTF1-205ENST00000558298 ODF3Q96PU9 254 aa5.96□□□□□ -1.46
RTF1-205ENST00000558298 AGRNO00468 2067 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 A0A0J9YXY3 114 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 J3QQQ9 107 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 M0R3E3 92 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 VCYO14598 125 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 IGHV3-11P01762 117 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 APELAP0DMC3 54 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 INAFM2P0DMQ5 153 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 FXYD7P58549 80 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 TMEM258P61165 79 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 C9orf47Q6ZRZ4 202 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 POM121L12Q8N7R1 296 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 ZNRF2Q8NHG8 242 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 TMEM263Q8WUH6 116 aaKnown RBP5.95□□□□□ -1.46
RTF1-205ENST00000558298 OVOL2Q9BRP0 275 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 C21orf62Q9NYP8 219 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 PEMTQ9UBM1 199 aa5.95□□□□□ -1.46
RTF1-205ENST00000558298 CSDC2Q9Y534 153 aaKnown RBP5.95□□□□□ -1.46
RTF1-205ENST00000558298 TRAV25A0A0B4J276 109 aa5.94□□□□□ -1.46
RTF1-205ENST00000558298 IGLV1-51P01701 117 aa5.94□□□□□ -1.46
RTF1-205ENST00000558298 TRBV12-3P01733 135 aa5.94□□□□□ -1.46
RTF1-205ENST00000558298 IGHV3-48P01763 117 aa5.94□□□□□ -1.46
RTF1-205ENST00000558298 CRYGAP11844 174 aa5.94□□□□□ -1.46
RTF1-205ENST00000558298 SLURP1P55000 103 aa5.94□□□□□ -1.46
RTF1-205ENST00000558298 RHOHQ15669 191 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms