RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 C18orf65Q6ZTR6 163 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 SLC25A29Q8N8R3 303 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 WFDC11Q8NEX6 87 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 AMELXQ99217 191 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 C1QTNF4Q9BXJ3 329 aa6.06□□□□□ -1.44
SPG11-209ENST00000558253 SPTAN1Q13813 2472 aaKnown RBP6.06□□□□□ -1.44
SPG11-209ENST00000558253 USP9XQ93008 2570 aaPredicted RBP6.06□□□□□ -1.44
SPG11-209ENST00000558253 CR1P17927 2039 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 IGLV4-3A0A075B6K6 122 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 TMEM223A0PJW6 202 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 J3QQQ9 107 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 RPL39P62891 51 aaKnown RBP6.05□□□□□ -1.44
SPG11-209ENST00000558253 MRPS36P82909 103 aaKnown RBP6.05□□□□□ -1.44
SPG11-209ENST00000558253 RRN3P1Q2M238 152 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 LCE1DQ5T752 114 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 RAB37Q96AX2 223 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 ZNF479Q96JC4 524 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 SPANXDQ9BXN6 97 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 TTTY13Q9BZ97 58 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 YAE1D1Q9NRH1 226 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 ACACBO00763 2458 aa6.05□□□□□ -1.44
SPG11-209ENST00000558253 MUC4Q99102 2169 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 TRAV26-1A0A087WT03 109 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 A0A0J9YY99 117 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 PLA2G2AP14555 144 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 HTN1P15515 57 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 UBE2D1P51668 147 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 DAZ2Q13117 558 aaKnown RBP6.04□□□□□ -1.44
SPG11-209ENST00000558253 ODF3L2Q3SX64 289 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 DAZ4Q86SG3 579 aaKnown RBP6.04□□□□□ -1.44
SPG11-209ENST00000558253 ZNRF2Q8NHG8 242 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 LINC01006Q8NI28 216 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 IL17DQ8TAD2 202 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 TMEM263Q8WUH6 116 aaKnown RBP6.04□□□□□ -1.44
SPG11-209ENST00000558253 DAZ3Q9NR90 486 aaKnown RBP6.04□□□□□ -1.44
SPG11-209ENST00000558253 ERG28Q9UKR5 140 aa6.04□□□□□ -1.44
SPG11-209ENST00000558253 CSDC2Q9Y534 153 aaKnown RBP6.04□□□□□ -1.44
SPG11-209ENST00000558253 TINCRA0A1B0GVN0 87 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 M0QXV9 152 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 CD28P10747 220 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 HILS1P60008 231 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 GAGE5Q13069 117 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 GAGE6Q13070 117 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 RNF183Q96D59 192 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 C16orf74Q96GX8 76 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 ESM1Q9NQ30 184 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 COL12A1Q99715 3063 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 SPG11Q96JI7 2443 aa6.03□□□□□ -1.44
SPG11-209ENST00000558253 TRBV20-1A0A075B6N2 111 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.02□□□□□ -1.45
SPG11-209ENST00000558253 TRAV4A0A0B4J268 109 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 H7C423 109 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 APOMO95445 188 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 IGLV1-51P01701 117 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 ZNF22P17026 224 aaPredicted RBP6.02□□□□□ -1.45
SPG11-209ENST00000558253 TIRAPP58753 221 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 RPL36AP83881 106 aaKnown RBP6.02□□□□□ -1.45
SPG11-209ENST00000558253 KRTAP1-1Q07627 177 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 FOXI1Q12951 378 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 RPL36ALQ969Q0 106 aaKnown RBP6.02□□□□□ -1.45
SPG11-209ENST00000558253 CHCHD7Q9BUK0 85 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
SPG11-209ENST00000558253 FLNCQ14315 2725 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 IGHV1-58A0A0C4DH39 117 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 TIMM17BO60830 172 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 IGHV3-30P01768 117 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 SPINK8P0C7L1 97 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 IGHV3-30-5P0DP03 117 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 FAM19A3Q7Z5A8 133 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 NDUFA11Q86Y39 141 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 C1orf158Q8N1D5 194 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 PPDPFLQ8WWR9 84 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 COPS9Q8WXC6 57 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 CITED2Q99967 270 aaPredicted RBP6.01□□□□□ -1.45
SPG11-209ENST00000558253 OVOL2Q9BRP0 275 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 XCL2Q9UBD3 114 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 UBE2D4Q9Y2X8 147 aa6.01□□□□□ -1.45
SPG11-209ENST00000558253 ZNF462Q96JM2 2506 aa6□□□□□ -1.45
SPG11-209ENST00000558253 ANKRD17O75179 2603 aaKnown RBP6□□□□□ -1.45
SPG11-209ENST00000558253 MYO18BQ8IUG5 2567 aa6□□□□□ -1.45
SPG11-209ENST00000558253 A0A0J9YXV3 536 aa6□□□□□ -1.45
SPG11-209ENST00000558253 A0A0J9YXY3 114 aa6□□□□□ -1.45
SPG11-209ENST00000558253 K7ERJ3 54 aa6□□□□□ -1.45
SPG11-209ENST00000558253 ZFAND6Q6FIF0 208 aa6□□□□□ -1.45
SPG11-209ENST00000558253 DGAT2L7PQ6IED9 249 aa6□□□□□ -1.45
SPG11-209ENST00000558253 Q6Q795 121 aa6□□□□□ -1.45
SPG11-209ENST00000558253 SPANXCQ9NY87 97 aa6□□□□□ -1.45
SPG11-209ENST00000558253 CSPG4Q6UVK1 2322 aa6□□□□□ -1.45
SPG11-209ENST00000558253 USP24Q9UPU5 2620 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 IGLV5-45A0A087WSX0 123 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 TRGV1A0A0A0MS02 117 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 IGHV3-73A0A0B4J1V6 119 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 A0A0B4J2C4 111 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 TRBV6-4A0A1B0GX49 114 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 A0A1W2PRX2 142 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 K7EQD1 137 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 IFITM1P13164 125 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 INSL3P51460 131 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 PROK1P58294 105 aa5.99□□□□□ -1.45
SPG11-209ENST00000558253 HERVK_113P63121 156 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms