RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 NTM-AS1Q6ZSK4 140 aa7.15□□□□□ -1.26
LRRC28-204ENST00000558172 WFDC10BQ8IUB3 73 aa7.15□□□□□ -1.26
LRRC28-204ENST00000558172 KIR2DL4Q99706 377 aa7.15□□□□□ -1.26
LRRC28-204ENST00000558172 CHCHD7Q9BUK0 85 aa7.15□□□□□ -1.26
LRRC28-204ENST00000558172 TRAPPC1Q9Y5R8 145 aa7.15□□□□□ -1.26
LRRC28-204ENST00000558172 HYDINQ4G0P3 5121 aa7.14□□□□□ -1.27
LRRC28-204ENST00000558172 IGLV2-18A0A075B6J9 118 aa7.14□□□□□ -1.27
LRRC28-204ENST00000558172 NBDYA0A0U1RRE5 68 aa7.14□□□□□ -1.27
LRRC28-204ENST00000558172 NPYP01303 97 aa7.14□□□□□ -1.27
LRRC28-204ENST00000558172 AMTP48728 403 aa7.14□□□□□ -1.27
LRRC28-204ENST00000558172 NIT1Q86X76 327 aa7.14□□□□□ -1.27
LRRC28-204ENST00000558172 C10orf126Q8N4M7 172 aa7.14□□□□□ -1.27
LRRC28-204ENST00000558172 CHCHD5Q9BSY4 110 aa7.14□□□□□ -1.27
LRRC28-204ENST00000558172 MAP1LC3AQ9H492 121 aa7.14□□□□□ -1.27
LRRC28-204ENST00000558172 RYR2Q92736 4967 aa7.13□□□□□ -1.27
LRRC28-204ENST00000558172 A0A087WX48 190 aa7.13□□□□□ -1.27
LRRC28-204ENST00000558172 TMEM262E9PQX1 116 aa7.13□□□□□ -1.27
LRRC28-204ENST00000558172 H7C423 109 aa7.13□□□□□ -1.27
LRRC28-204ENST00000558172 ATP6V1G1O75348 118 aa7.13□□□□□ -1.27
LRRC28-204ENST00000558172 BTF3P20290 206 aaKnown RBP7.13□□□□□ -1.27
LRRC28-204ENST00000558172 FCER1GP30273 86 aa7.13□□□□□ -1.27
LRRC28-204ENST00000558172 KIAA1644Q3SXP7 199 aa7.13□□□□□ -1.27
LRRC28-204ENST00000558172 TMEM243Q9BU79 118 aa7.13□□□□□ -1.27
LRRC28-204ENST00000558172 SMIM2Q9BVW6 85 aa7.13□□□□□ -1.27
LRRC28-204ENST00000558172 K7EMI3 77 aa7.12□□□□□ -1.27
LRRC28-204ENST00000558172 UBE2L6O14933 153 aa7.12□□□□□ -1.27
LRRC28-204ENST00000558172 TSHBP01222 138 aa7.12□□□□□ -1.27
LRRC28-204ENST00000558172 Q6ZR54 194 aa7.12□□□□□ -1.27
LRRC28-204ENST00000558172 ALKBH7Q9BT30 221 aaPredicted RBP7.12□□□□□ -1.27
LRRC28-204ENST00000558172 COLCA2A8K830 154 aa7.11□□□□□ -1.27
LRRC28-204ENST00000558172 M0R2N4 97 aa7.11□□□□□ -1.27
LRRC28-204ENST00000558172 ESDP10768 282 aa7.11□□□□□ -1.27
LRRC28-204ENST00000558172 RAB5AP20339 215 aa7.11□□□□□ -1.27
LRRC28-204ENST00000558172 Q8N8P6 123 aa7.11□□□□□ -1.27
LRRC28-204ENST00000558172 TMEM18Q96B42 140 aa7.11□□□□□ -1.27
LRRC28-204ENST00000558172 NXT2Q9NPJ8 142 aaKnown RBP7.11□□□□□ -1.27
LRRC28-204ENST00000558172 DNAH2Q9P225 4427 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 LOC389332A0A1B0GUA5 103 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 A0A1B0GUV1 79 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 IGHV3-30P01768 117 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 IGHV3-33P01772 117 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 IGHV3-30-3P0DP02 117 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 IGHV3-30-5P0DP03 117 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 SMAGPQ0VAQ4 97 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 GAGE6Q13070 117 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 DEFB104AQ8WTQ1 72 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 KRTAP3-3Q9BYR6 98 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
LRRC28-204ENST00000558172 IBA57-AS1B1ANH7 110 aa7.09□□□□□ -1.27
LRRC28-204ENST00000558172 SCO1O75880 301 aa7.09□□□□□ -1.27
LRRC28-204ENST00000558172 LAGE3Q14657 143 aa7.09□□□□□ -1.27
LRRC28-204ENST00000558172 MPV17L2Q567V2 206 aa7.09□□□□□ -1.27
LRRC28-204ENST00000558172 AMMECR1LQ6DCA0 310 aa7.09□□□□□ -1.27
LRRC28-204ENST00000558172 PRSS3P2Q8NHM4 247 aa7.09□□□□□ -1.27
LRRC28-204ENST00000558172 RYR3Q15413 4870 aa7.09□□□□□ -1.28
LRRC28-204ENST00000558172 DNAH10Q8IVF4 4471 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
LRRC28-204ENST00000558172 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
LRRC28-204ENST00000558172 ZNF25P17030 456 aaPredicted RBP7.08□□□□□ -1.28
LRRC28-204ENST00000558172 G0S2P27469 103 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 IFI27P40305 119 aaPredicted RBP7.08□□□□□ -1.28
LRRC28-204ENST00000558172 RBX1P62877 108 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 ORMDL2Q53FV1 153 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 C1orf134Q5TEV5 83 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 NFE4Q86UQ8 179 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 C6orf223Q8N319 242 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 C20orf203Q8NBC4 194 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 TMEM101Q96IK0 257 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
LRRC28-204ENST00000558172 TRAV8-3A0A0A6YYJ7 113 aa7.07□□□□□ -1.28
LRRC28-204ENST00000558172 ANGP03950 147 aaKnown RBP7.07□□□□□ -1.28
LRRC28-204ENST00000558172 FGF6P10767 208 aa7.07□□□□□ -1.28
LRRC28-204ENST00000558172 Q0VG73 95 aa7.07□□□□□ -1.28
LRRC28-204ENST00000558172 MRPL52Q86TS9 123 aaKnown RBP7.07□□□□□ -1.28
LRRC28-204ENST00000558172 Q8N976 141 aa7.07□□□□□ -1.28
LRRC28-204ENST00000558172 KLK12Q9UKR0 248 aa7.07□□□□□ -1.28
LRRC28-204ENST00000558172 DNAH17Q9UFH2 4485 aa7.07□□□□□ -1.28
LRRC28-204ENST00000558172 CRPP02741 224 aa7.06□□□□□ -1.28
LRRC28-204ENST00000558172 TRGC2P03986 189 aa7.06□□□□□ -1.28
LRRC28-204ENST00000558172 RAB5BP61020 215 aa7.06□□□□□ -1.28
LRRC28-204ENST00000558172 DGAT2L7PQ6IED9 249 aa7.06□□□□□ -1.28
LRRC28-204ENST00000558172 RNASEKQ6P5S7 137 aaKnown RBP7.06□□□□□ -1.28
LRRC28-204ENST00000558172 Q8N3U1 123 aa7.06□□□□□ -1.28
LRRC28-204ENST00000558172 C18orf32Q8TCD1 76 aa7.06□□□□□ -1.28
LRRC28-204ENST00000558172 TIMM21Q9BVV7 248 aa7.06□□□□□ -1.28
LRRC28-204ENST00000558172 CSDC2Q9Y534 153 aaKnown RBP7.06□□□□□ -1.28
LRRC28-204ENST00000558172 LINC01546A6NGU7 62 aa7.05□□□□□ -1.28
LRRC28-204ENST00000558172 LINC01549A6NIU2 74 aa7.05□□□□□ -1.28
LRRC28-204ENST00000558172 FA2HQ7L5A8 372 aa7.05□□□□□ -1.28
LRRC28-204ENST00000558172 OR5A1Q8NGJ0 315 aa7.05□□□□□ -1.28
LRRC28-204ENST00000558172 UBE2WQ96B02 151 aa7.05□□□□□ -1.28
LRRC28-204ENST00000558172 RMI2Q96E14 147 aa7.05□□□□□ -1.28
LRRC28-204ENST00000558172 COX11Q9Y6N1 276 aa7.05□□□□□ -1.28
LRRC28-204ENST00000558172 IGLV4-60A0A075B6I1 120 aa7.04□□□□□ -1.28
LRRC28-204ENST00000558172 LINC00614P0C842 121 aa7.04□□□□□ -1.28
LRRC28-204ENST00000558172 MIAQ16674 131 aa7.04□□□□□ -1.28
LRRC28-204ENST00000558172 LINC00269Q8N2A0 174 aa7.04□□□□□ -1.28
LRRC28-204ENST00000558172 TM2D2Q9BX73 214 aa7.04□□□□□ -1.28
LRRC28-204ENST00000558172 CDC42SE2Q9NRR3 84 aa7.04□□□□□ -1.28
LRRC28-204ENST00000558172 SPANXA1Q9NS26 97 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms