RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 POLR2KP53803 58 aaKnown RBP8.14□□□□□ -1.11
USP3-206ENST00000558157 BRD3OSQ6XYD6 125 aa8.14□□□□□ -1.11
USP3-206ENST00000558157 ZFAND3Q9H8U3 227 aa8.14□□□□□ -1.11
USP3-206ENST00000558157 ITPR3Q14573 2671 aa8.14□□□□□ -1.11
USP3-206ENST00000558157 TRAV21A0A0B4J279 112 aa8.13□□□□□ -1.11
USP3-206ENST00000558157 OOSP1A8MZH6 123 aa8.13□□□□□ -1.11
USP3-206ENST00000558157 COX7CP15954 63 aa8.13□□□□□ -1.11
USP3-206ENST00000558157 S100A4P26447 101 aaKnown RBP8.13□□□□□ -1.11
USP3-206ENST00000558157 SDIM1Q6ZPB5 146 aa8.13□□□□□ -1.11
USP3-206ENST00000558157 DUX3Q96PT4 197 aa8.13□□□□□ -1.11
USP3-206ENST00000558157 ZANQ9Y493 2812 aa8.13□□□□□ -1.11
USP3-206ENST00000558157 NXPH4O95158 308 aa8.13□□□□□ -1.11
USP3-206ENST00000558157 MGPP08493 103 aa8.13□□□□□ -1.11
USP3-206ENST00000558157 CCDC168Q8NDH2 2452 aa8.13□□□□□ -1.11
USP3-206ENST00000558157 CREBBPQ92793 2442 aa8.12□□□□□ -1.11
USP3-206ENST00000558157 CELSR1Q9NYQ6 3014 aa8.12□□□□□ -1.11
USP3-206ENST00000558157 LINC00477Q96M19 166 aa8.12□□□□□ -1.11
USP3-206ENST00000558157 ZNF469Q96JG9 3925 aaPredicted RBP8.12□□□□□ -1.11
USP3-206ENST00000558157 J3QLI3 93 aa8.12□□□□□ -1.11
USP3-206ENST00000558157 C3orf56Q8N813 242 aa8.12□□□□□ -1.11
USP3-206ENST00000558157 A0A0J9YXY3 114 aa8.11□□□□□ -1.11
USP3-206ENST00000558157 TRBV6-5A0A0K0K1A5 114 aa8.11□□□□□ -1.11
USP3-206ENST00000558157 TRBV27A0A0K0K1C4 114 aa8.11□□□□□ -1.11
USP3-206ENST00000558157 LOC107984640A0A0U1RRK4 108 aa8.11□□□□□ -1.11
USP3-206ENST00000558157 KLK9Q2XQG4 91 aa8.11□□□□□ -1.11
USP3-206ENST00000558157 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
USP3-206ENST00000558157 C5orf38Q86SI9 138 aa8.11□□□□□ -1.11
USP3-206ENST00000558157 LINC00527Q9UJ94 153 aa8.11□□□□□ -1.11
USP3-206ENST00000558157 KLK9Q9UKQ9 250 aa8.11□□□□□ -1.11
USP3-206ENST00000558157 ZNF22P17026 224 aaPredicted RBP8.1□□□□□ -1.11
USP3-206ENST00000558157 RHOHQ15669 191 aa8.1□□□□□ -1.11
USP3-206ENST00000558157 ATOX1O00244 68 aa8.1□□□□□ -1.11
USP3-206ENST00000558157 Q8N6K4 173 aa8.1□□□□□ -1.11
USP3-206ENST00000558157 NSUN5P1Q3KNT7 163 aa8.09□□□□□ -1.11
USP3-206ENST00000558157 C9orf139Q6ZV77 190 aa8.09□□□□□ -1.11
USP3-206ENST00000558157 DCANP1Q8TF63 244 aa8.09□□□□□ -1.11
USP3-206ENST00000558157 LITAFQ99732 161 aa8.09□□□□□ -1.11
USP3-206ENST00000558157 PEMTQ9UBM1 199 aa8.09□□□□□ -1.11
USP3-206ENST00000558157 KIF25-AS1Q9Y6Z4 181 aa8.09□□□□□ -1.11
USP3-206ENST00000558157 FLNAP21333 2647 aaKnown RBP8.09□□□□□ -1.11
USP3-206ENST00000558157 LINC00315P59091 139 aa8.09□□□□□ -1.11
USP3-206ENST00000558157 RPL39P62891 51 aaKnown RBP8.09□□□□□ -1.11
USP3-206ENST00000558157 CEMP1Q6PRD7 247 aaPredicted RBP8.09□□□□□ -1.11
USP3-206ENST00000558157 FSHBP01225 129 aa8.08□□□□□ -1.12
USP3-206ENST00000558157 IGHV3-23P01764 117 aa8.08□□□□□ -1.12
USP3-206ENST00000558157 TMEM258P61165 79 aa8.08□□□□□ -1.12
USP3-206ENST00000558157 HIST1H4AP62805 103 aaKnown RBP8.08□□□□□ -1.12
USP3-206ENST00000558157 MIAQ16674 131 aa8.08□□□□□ -1.12
USP3-206ENST00000558157 PRR9Q5T870 116 aa8.08□□□□□ -1.12
USP3-206ENST00000558157 APRG1Q8IVJ8 170 aa8.08□□□□□ -1.12
USP3-206ENST00000558157 ZFAND2AQ8N6M9 145 aa8.08□□□□□ -1.12
USP3-206ENST00000558157 CLPSL1A2RUU4 121 aa8.08□□□□□ -1.12
USP3-206ENST00000558157 TMEM61Q8N0U2 210 aa8.08□□□□□ -1.12
USP3-206ENST00000558157 ZFHX3Q15911 3703 aa8.07□□□□□ -1.12
USP3-206ENST00000558157 I3L3M4 83 aa8.07□□□□□ -1.12
USP3-206ENST00000558157 OVOL1O14753 267 aa8.07□□□□□ -1.12
USP3-206ENST00000558157 DAND5Q8N907 189 aa8.07□□□□□ -1.12
USP3-206ENST00000558157 C2orf48Q96LS8 159 aa8.07□□□□□ -1.12
USP3-206ENST00000558157 U3KQE9 123 aa8.07□□□□□ -1.12
USP3-206ENST00000558157 TIMM17BO60830 172 aa8.07□□□□□ -1.12
USP3-206ENST00000558157 NDPQ00604 133 aa8.07□□□□□ -1.12
USP3-206ENST00000558157 KRTAP1-1Q07627 177 aa8.07□□□□□ -1.12
USP3-206ENST00000558157 TEX15Q9BXT5 2789 aa8.06□□□□□ -1.12
USP3-206ENST00000558157 TRACP01848 142 aa8.06□□□□□ -1.12
USP3-206ENST00000558157 RNASE3P12724 160 aaKnown RBP8.06□□□□□ -1.12
USP3-206ENST00000558157 CLEC2BQ92478 149 aa8.06□□□□□ -1.12
USP3-206ENST00000558157 C16orf92Q96LL3 132 aa8.06□□□□□ -1.12
USP3-206ENST00000558157 PRSS2P07478 247 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 IGHV3-30-3P0DP02 117 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 RNASE4P34096 147 aaKnown RBP8.05□□□□□ -1.12
USP3-206ENST00000558157 DEFB112Q30KQ8 113 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 SUMO4Q6EEV6 95 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 Q8N9W7 124 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 FAM110DQ8TAY7 271 aaPredicted RBP8.05□□□□□ -1.12
USP3-206ENST00000558157 CSPG4Q6UVK1 2322 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 H3BUX3 64 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 LY6EQ16553 131 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 SMCR5Q8TEV8 140 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 FAM19A4Q96LR4 140 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 TIMM21Q9BVV7 248 aa8.05□□□□□ -1.12
USP3-206ENST00000558157 TRAV8-3A0A0A6YYJ7 113 aa8.04□□□□□ -1.12
USP3-206ENST00000558157 MYO9AB2RTY4 2548 aa8.04□□□□□ -1.12
USP3-206ENST00000558157 PF4V1P10720 104 aa8.04□□□□□ -1.12
USP3-206ENST00000558157 C15orf32Q32M92 178 aa8.04□□□□□ -1.12
USP3-206ENST00000558157 IGHV3OR16-8A0A075B7F1 116 aa8.04□□□□□ -1.12
USP3-206ENST00000558157 INAFM2P0DMQ5 153 aa8.04□□□□□ -1.12
USP3-206ENST00000558157 EDA2RQ9HAV5 297 aa8.04□□□□□ -1.12
USP3-206ENST00000558157 ANK3Q12955 4377 aaKnown RBP8.04□□□□□ -1.12
USP3-206ENST00000558157 FAM222AQ5U5X8 452 aa8.03□□□□□ -1.12
USP3-206ENST00000558157 MOB4Q9Y3A3 225 aa8.03□□□□□ -1.12
USP3-206ENST00000558157 IGHV3-35A0A0C4DH35 117 aa8.03□□□□□ -1.12
USP3-206ENST00000558157 IGHV1-58A0A0C4DH39 117 aa8.03□□□□□ -1.12
USP3-206ENST00000558157 A6NDX4 124 aa8.03□□□□□ -1.12
USP3-206ENST00000558157 MRPS36P82909 103 aaKnown RBP8.03□□□□□ -1.12
USP3-206ENST00000558157 C5orf56Q8N8D9 126 aa8.03□□□□□ -1.12
USP3-206ENST00000558157 C20orf203Q8NBC4 194 aa8.03□□□□□ -1.12
USP3-206ENST00000558157 MRAPQ8TCY5 172 aa8.03□□□□□ -1.12
USP3-206ENST00000558157 KLK5Q9Y337 293 aaPredicted RBP8.03□□□□□ -1.12
USP3-206ENST00000558157 OTOGQ6ZRI0 2925 aa8.02□□□□□ -1.12
USP3-206ENST00000558157 TRBV7-1A0A0A6YYK4 115 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 194.5 ms