RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ERASQ7Z444 233 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 TMEM75Q8N9X5 138 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 SCGB1C1Q8TD33 95 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 SGK494Q96LW2 274 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 NKX6-2Q9C056 277 aaPredicted RBP3.27□□□□□ -1.89
SPG11-208ENST00000558155 WDR61Q9GZS3 305 aaKnown RBP3.27□□□□□ -1.89
SPG11-208ENST00000558155 JPT2Q9H910 190 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 PLAC8Q9NZF1 115 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 PSG8Q9UQ74 426 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 KIF25-AS1Q9Y6Z4 181 aa3.27□□□□□ -1.89
SPG11-208ENST00000558155 A0A087WWL8 130 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 TGIF2-C20orf24A0A0A6YYL0 155 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 GAGE10A6NGK3 116 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 FABP5P3A8MUU1 101 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 H3BMQ9 156 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 PDE6DO43924 150 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 UPK1BO75841 260 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 NPSP0C0P6 89 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 GZMBP10144 247 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 PTTG1IPP53801 180 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 UBE2D3P61077 147 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 UBE2D2P62837 147 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 GNG5P63218 68 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 EIF5AP63241 154 aaKnown RBP3.26□□□□□ -1.89
SPG11-208ENST00000558155 IL15RAQ13261 267 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 MPV17L2Q567V2 206 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 TMEM97Q5BJF2 176 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 AKR1C8PQ5T2L2 129 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 FAM74A4Q5TZK3 123 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 TEX261Q6UWH6 196 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 PRNTQ86SH4 94 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 OR11H4Q8NGC9 324 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 SPACA4Q8TDM5 124 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 CHCHD5Q9BSY4 110 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 IL36BQ9NZH7 164 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 ZFP30Q9Y2G7 519 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 LRP2P98164 4655 aa3.26□□□□□ -1.89
SPG11-208ENST00000558155 TRAV8-4A0A0B4J246 113 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 IGKV3D-20A0A0C4DH25 116 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 ZNF561-AS1K7EIQ3 104 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 P01737 135 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 TCRAP04437 139 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 ARMS2P0C7Q2 107 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 CHTF8P0CG12 524 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 CAMPP49913 170 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 SNRPEP62304 92 aaKnown RBP3.25□□□□□ -1.89
SPG11-208ENST00000558155 PRR3P79522 188 aaKnown RBP3.25□□□□□ -1.89
SPG11-208ENST00000558155 CT83Q5H943 113 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 EIF5AL1Q6IS14 154 aaKnown RBP3.25□□□□□ -1.89
SPG11-208ENST00000558155 LINC00269Q8N2A0 174 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 SVBPQ8N300 66 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 C5orf17Q8NAS9 161 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 OR10G8Q8NGN5 311 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 ORAOV1Q8WV07 137 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 PRR34Q9NV39 138 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 PHLDA3Q9Y5J5 127 aa3.25□□□□□ -1.89
SPG11-208ENST00000558155 PKHD1L1Q86WI1 4243 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 FAM231BA6NCW3 169 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 B4DEV8 164 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 H3BVH4 76 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 M0QXV9 152 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 HSBP1O75506 76 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 SLPIP03973 132 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 TPT1P13693 172 aaKnown RBP3.24□□□□□ -1.89
SPG11-208ENST00000558155 PMCHP20382 165 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 BTCP35070 178 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 CKS1BP61024 79 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 COX6A2Q02221 97 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 FABP9Q0Z7S8 132 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 SRSF9Q13242 221 aaKnown RBP eCLIP3.24□□□□□ -1.89
SPG11-208ENST00000558155 COL5A1-AS1Q5SY13 56 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 KRTAP26-1Q6PEX3 210 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 STPG4Q8N801 248 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 LYPD6BQ8NI32 183 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 EPDR1Q9UM22 224 aa3.24□□□□□ -1.89
SPG11-208ENST00000558155 IGLV10-54A0A075B6I4 117 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 TRBV25-1A0A075B6N4 114 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 H7C1H1 209 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 M0R381 172 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 HMGB3O15347 200 aaKnown RBP3.23□□□□□ -1.89
SPG11-208ENST00000558155 TSPAN13O95857 204 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 APOC3P02656 99 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 RPS10P46783 165 aaKnown RBP3.23□□□□□ -1.89
SPG11-208ENST00000558155 CYCSP99999 105 aaKnown RBP3.23□□□□□ -1.89
SPG11-208ENST00000558155 REG3AQ06141 175 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 GAGE6Q13070 117 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 OCIAD2Q56VL3 154 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 PRR27Q6MZM9 219 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 UQCC3Q6UW78 93 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 CLPSL2Q6UWE3 100 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 Q6ZRP5 223 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 INO80EQ8NBZ0 244 aaPredicted RBP3.23□□□□□ -1.89
SPG11-208ENST00000558155 SDHCQ99643 169 aaPredicted RBP3.23□□□□□ -1.89
SPG11-208ENST00000558155 SPANXCQ9NY87 97 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 LINC00474Q9P2X8 69 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 VAX2Q9UIW0 290 aa3.23□□□□□ -1.89
SPG11-208ENST00000558155 IGKV2-24A0A0C4DH68 120 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 TMEM218A2RU14 115 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 GRIFINA4D1Z8 144 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 F5H697 171 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms