RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 FAM104BQ5XKR9 115 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 OR10D4PQ8NGN7 298 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 C18orf32Q8TCD1 76 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 UPK3BQ9BT76 320 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 PRO0255Q9UI72 69 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 HHLA3Q9XRX5 114 aa5.18□□□□□ -1.58
SPG11-205ENST00000558080 TRGV11A0A075B6L2 103 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 MUC21A0A0G2JKD1 596 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 MUC21A0A140T8X8 626 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 C16orf90A8MZG2 172 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 SIVA1O15304 175 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 NXPH4O95158 308 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 IQCJQ1A5X6 159 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 TDRG1Q3Y452 100 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 ORMDL3Q8N138 153 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 OR10AG1Q8NH19 301 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 CHCHD1Q96BP2 118 aaKnown RBP5.17□□□□□ -1.58
SPG11-205ENST00000558080 ZNF479Q96JC4 524 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 C12orf57Q99622 126 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 SPXQ9BT56 116 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 SAMD10Q9BYL1 202 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 SCRT2Q9NQ03 307 aa5.17□□□□□ -1.58
SPG11-205ENST00000558080 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 IGHV3-16A0A0C4DH30 117 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 D6R8Y8 96 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 HSBP1O75506 76 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 PPBPP02775 128 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 SSTP61278 116 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 MRPL23Q16540 153 aaKnown RBP5.16□□□□□ -1.58
SPG11-205ENST00000558080 MRPL51Q4U2R6 128 aaKnown RBP5.16□□□□□ -1.58
SPG11-205ENST00000558080 LYPD5Q6UWN5 251 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 SPATA12Q7Z6I5 190 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 AMN1Q8IY45 258 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 RASL10AQ92737 203 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 LAMTOR2Q9Y2Q5 125 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 PHLDA3Q9Y5J5 127 aa5.16□□□□□ -1.58
SPG11-205ENST00000558080 M0R2P5 195 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 NUPR1O60356 82 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 GYPEP15421 78 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 RAB4AP20338 218 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 PMCHP20382 165 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 CKS2P33552 79 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 AMTP48728 403 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 LINC00315P59091 139 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 RNASEKQ6P5S7 137 aaKnown RBP5.15□□□□□ -1.59
SPG11-205ENST00000558080 NEGR1Q7Z3B1 354 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 NIT1Q86X76 327 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 OR4C5Q8NGB2 326 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 RNF185Q96GF1 192 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 PRELID3AQ96N28 172 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 AP1S3Q96PC3 154 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 MSRB1Q9NZV6 116 aa5.15□□□□□ -1.59
SPG11-205ENST00000558080 RYR1P21817 5038 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 TRAV4A0A0B4J268 109 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 LOC100131303A0A0U1RQF7 123 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 K7EQD1 137 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 M0R381 172 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 LINC00614P0C842 121 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 RNASE3P12724 160 aaKnown RBP5.14□□□□□ -1.59
SPG11-205ENST00000558080 JOSD1Q15040 202 aaPredicted RBP5.14□□□□□ -1.59
SPG11-205ENST00000558080 PYY3Q5JQD4 70 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 FA2HQ7L5A8 372 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 MRAP2Q96G30 205 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 C9orf85Q96MD7 179 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 DPH3P1Q9H4G8 78 aa5.14□□□□□ -1.59
SPG11-205ENST00000558080 SMIM17P0DL12 118 aa5.13□□□□□ -1.59
SPG11-205ENST00000558080 EVI2AP22794 236 aa5.13□□□□□ -1.59
SPG11-205ENST00000558080 ZNF876PQ49A33 203 aa5.13□□□□□ -1.59
SPG11-205ENST00000558080 WFDC10BQ8IUB3 73 aa5.13□□□□□ -1.59
SPG11-205ENST00000558080 PRSS3P2Q8NHM4 247 aa5.13□□□□□ -1.59
SPG11-205ENST00000558080 MAP1LC3AQ9H492 121 aa5.13□□□□□ -1.59
SPG11-205ENST00000558080 IGHV3-73A0A0B4J1V6 119 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 IGHV1-24A0A0C4DH33 117 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 SMKR1H3BMG3 65 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 ZNF561-AS1K7EIQ3 104 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 RS1O15537 224 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 NCR2O95944 276 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 PPP1R17O96001 155 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 NPYP01303 97 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 GATA1P15976 413 aaPredicted RBP5.12□□□□□ -1.59
SPG11-205ENST00000558080 BTF3P20290 206 aaKnown RBP5.12□□□□□ -1.59
SPG11-205ENST00000558080 FUSP35637 526 aaKnown RBP eCLIP5.12□□□□□ -1.59
SPG11-205ENST00000558080 Q6ZRN7 208 aaPredicted RBP5.12□□□□□ -1.59
SPG11-205ENST00000558080 URB1-AS1Q96HZ7 61 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 NXT2Q9NPJ8 142 aaKnown RBP5.12□□□□□ -1.59
SPG11-205ENST00000558080 NIT2Q9NQR4 276 aa5.12□□□□□ -1.59
SPG11-205ENST00000558080 ABCA13Q86UQ4 5058 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 TRAV9-2A0A087WT02 112 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 PRSS47A8MTI9 375 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 CDK2AP2O75956 126 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 TNFRSF6BO95407 300 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 MGPP08493 103 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 PIK3CD-AS1Q5SR53 167 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 CFAP126Q5VTH2 177 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 FAM19A2Q8N3H0 131 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 C14orf178Q8N769 122 aaPredicted RBP5.11□□□□□ -1.59
SPG11-205ENST00000558080 PTH2Q96A98 100 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 HSPB8Q9UJY1 196 aa5.11□□□□□ -1.59
SPG11-205ENST00000558080 LOC389332A0A1B0GUA5 103 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 LINC01546A6NGU7 62 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms