RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 TEX43Q6ZNM6 134 aa14.39□□□□□ -0.11
SNRPA1-205ENST00000558036 CIDEAO60543 219 aa14.38□□□□□ -0.11
SNRPA1-205ENST00000558036 SPART-AS1P0CW21 52 aa14.38□□□□□ -0.11
SNRPA1-205ENST00000558036 MAJINQ3KP22 176 aa14.38□□□□□ -0.11
SNRPA1-205ENST00000558036 PRSS1P07477 247 aa14.38□□□□□ -0.11
SNRPA1-205ENST00000558036 S100A12P80511 92 aa14.38□□□□□ -0.11
SNRPA1-205ENST00000558036 ATP5LO75964 103 aa14.37□□□□□ -0.11
SNRPA1-205ENST00000558036 RHOHQ15669 191 aa14.37□□□□□ -0.11
SNRPA1-205ENST00000558036 LINC01545Q5VT33 79 aa14.37□□□□□ -0.11
SNRPA1-205ENST00000558036 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-205ENST00000558036 UBE2D3P61077 147 aa14.36□□□□□ -0.11
SNRPA1-205ENST00000558036 UBE2D2P62837 147 aa14.36□□□□□ -0.11
SNRPA1-205ENST00000558036 PAM16Q9Y3D7 125 aa14.36□□□□□ -0.11
SNRPA1-205ENST00000558036 ZNF664Q8N3J9 261 aa14.36□□□□□ -0.11
SNRPA1-205ENST00000558036 C20orf203Q8NBC4 194 aa14.36□□□□□ -0.11
SNRPA1-205ENST00000558036 C20orf202A1L168 122 aa14.35□□□□□ -0.11
SNRPA1-205ENST00000558036 COTL1Q14019 142 aa14.35□□□□□ -0.11
SNRPA1-205ENST00000558036 PRO1933Q9H354 126 aa14.35□□□□□ -0.11
SNRPA1-205ENST00000558036 HTN3P15516 51 aa14.35□□□□□ -0.11
SNRPA1-205ENST00000558036 ERASQ7Z444 233 aa14.35□□□□□ -0.11
SNRPA1-205ENST00000558036 PRADC1Q9BSG0 188 aa14.35□□□□□ -0.11
SNRPA1-205ENST00000558036 IGIPA6NJ69 53 aa14.34□□□□□ -0.11
SNRPA1-205ENST00000558036 CRYBA4P53673 196 aa14.34□□□□□ -0.11
SNRPA1-205ENST00000558036 CHCHD7Q9BUK0 85 aa14.34□□□□□ -0.11
SNRPA1-205ENST00000558036 VAMP8Q9BV40 100 aa14.34□□□□□ -0.11
SNRPA1-205ENST00000558036 Q6ZN92 141 aa14.33□□□□□ -0.11
SNRPA1-205ENST00000558036 OPRPNQ99935 248 aaPredicted RBP14.33□□□□□ -0.11
SNRPA1-205ENST00000558036 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-205ENST00000558036 IGKV2-29A2NJV5 120 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-205ENST00000558036 G0S2P27469 103 aa14.33□□□□□ -0.12
SNRPA1-205ENST00000558036 ZC2HC1BQ5TFG8 222 aa14.33□□□□□ -0.12
SNRPA1-205ENST00000558036 HUWE1Q7Z6Z7 4374 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 A0A0J9YY99 117 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 ATP5G1P05496 136 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 GYPEP15421 78 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 ODF1Q14990 250 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 CEMP1Q6PRD7 247 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 DAZ4Q86SG3 579 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 BAALCQ8WXS3 180 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 DAZ3Q9NR90 486 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 PRO0255Q9UI72 69 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 A0A0J9YWU9 116 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 LGALS9CQ6DKI2 356 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 NTM-AS1Q6ZSK4 140 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 ZMAT4Q9H898 229 aa14.32□□□□□ -0.12
SNRPA1-205ENST00000558036 C12orf74Q32Q52 190 aa14.31□□□□□ -0.12
SNRPA1-205ENST00000558036 hDV102S1A0JD36 115 aa14.3□□□□□ -0.12
SNRPA1-205ENST00000558036 F5H768 121 aa14.3□□□□□ -0.12
SNRPA1-205ENST00000558036 A0A096LPF7 62 aa14.29□□□□□ -0.12
SNRPA1-205ENST00000558036 PAX4O43316 350 aa14.29□□□□□ -0.12
SNRPA1-205ENST00000558036 VSIG2Q96IQ7 327 aa14.29□□□□□ -0.12
SNRPA1-205ENST00000558036 TRAV26-1A0A087WT03 109 aa14.29□□□□□ -0.12
SNRPA1-205ENST00000558036 LINC00694P0DN24 101 aa14.29□□□□□ -0.12
SNRPA1-205ENST00000558036 TM2D3Q9BRN9 247 aa14.29□□□□□ -0.12
SNRPA1-205ENST00000558036 C11orf68Q9H3H3 251 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-205ENST00000558036 MRPL35Q9NZE8 188 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-205ENST00000558036 SPATA45Q537H7 98 aa14.28□□□□□ -0.12
SNRPA1-205ENST00000558036 TIMM17AQ99595 171 aa14.28□□□□□ -0.12
SNRPA1-205ENST00000558036 SPATA25Q9BR10 227 aa14.28□□□□□ -0.12
SNRPA1-205ENST00000558036 TRAV9-2A0A087WT02 112 aa14.27□□□□□ -0.12
SNRPA1-205ENST00000558036 COL7A1Q02388 2944 aa14.27□□□□□ -0.13
SNRPA1-205ENST00000558036 A0A087WX48 190 aa14.27□□□□□ -0.13
SNRPA1-205ENST00000558036 PRSS29PA6NIE9 313 aa14.27□□□□□ -0.13
SNRPA1-205ENST00000558036 TMEM141Q96I45 108 aa14.27□□□□□ -0.13
SNRPA1-205ENST00000558036 LINC01549A6NIU2 74 aa14.26□□□□□ -0.13
SNRPA1-205ENST00000558036 TCTAP57738 103 aa14.26□□□□□ -0.13
SNRPA1-205ENST00000558036 TEX48A0A1B0GUV7 120 aa14.26□□□□□ -0.13
SNRPA1-205ENST00000558036 RNASE13Q5GAN3 156 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-205ENST00000558036 Q6ZTC4 211 aa14.26□□□□□ -0.13
SNRPA1-205ENST00000558036 FAM104AQ969W3 186 aa14.26□□□□□ -0.13
SNRPA1-205ENST00000558036 PKIAP61925 76 aa14.25□□□□□ -0.13
SNRPA1-205ENST00000558036 UBE2D4Q9Y2X8 147 aa14.25□□□□□ -0.13
SNRPA1-205ENST00000558036 IGLV4-3A0A075B6K6 122 aa14.24□□□□□ -0.13
SNRPA1-205ENST00000558036 TRAV12-1A0A0B4J245 112 aa14.24□□□□□ -0.13
SNRPA1-205ENST00000558036 CHTOPQ9Y3Y2 248 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-205ENST00000558036 NANOS2P60321 138 aaKnown RBP14.24□□□□□ -0.13
SNRPA1-205ENST00000558036 STPG4Q8N801 248 aa14.24□□□□□ -0.13
SNRPA1-205ENST00000558036 DNAH9Q9NYC9 4486 aa14.23□□□□□ -0.13
SNRPA1-205ENST00000558036 TSTD3H0UI37 97 aa14.23□□□□□ -0.13
SNRPA1-205ENST00000558036 ATP6V0E2Q8NHE4 81 aa14.23□□□□□ -0.13
SNRPA1-205ENST00000558036 CST9LQ9H4G1 147 aa14.23□□□□□ -0.13
SNRPA1-205ENST00000558036 PMVKQ15126 192 aa14.23□□□□□ -0.13
SNRPA1-205ENST00000558036 GTSF1LQ9H1H1 148 aa14.23□□□□□ -0.13
SNRPA1-205ENST00000558036 MEGF8Q7Z7M0 2845 aa14.22□□□□□ -0.13
SNRPA1-205ENST00000558036 F8VRH5 84 aa14.22□□□□□ -0.13
SNRPA1-205ENST00000558036 DPM2O94777 84 aa14.22□□□□□ -0.13
SNRPA1-205ENST00000558036 IGKCP01834 107 aa14.22□□□□□ -0.13
SNRPA1-205ENST00000558036 C11orf45Q8TAV5 145 aa14.21□□□□□ -0.13
SNRPA1-205ENST00000558036 PYGO1Q9Y3Y4 419 aa14.21□□□□□ -0.13
SNRPA1-205ENST00000558036 TRBV6-8A0A0A6YYG3 113 aa14.21□□□□□ -0.13
SNRPA1-205ENST00000558036 TRBV25-1A0A075B6N4 114 aa14.2□□□□□ -0.14
SNRPA1-205ENST00000558036 HSBP1L1C9JCN9 74 aa14.2□□□□□ -0.14
SNRPA1-205ENST00000558036 Q6ZUT4 128 aa14.2□□□□□ -0.14
SNRPA1-205ENST00000558036 C14orf144Q96I85 54 aa14.2□□□□□ -0.14
SNRPA1-205ENST00000558036 TMEM243Q9BU79 118 aa14.2□□□□□ -0.14
SNRPA1-205ENST00000558036 FGF6P10767 208 aa14.2□□□□□ -0.14
SNRPA1-205ENST00000558036 VCX2Q9H322 139 aa14.2□□□□□ -0.14
SNRPA1-205ENST00000558036 SPANXA1Q9NS26 97 aa14.2□□□□□ -0.14
SNRPA1-205ENST00000558036 TP73-AS1Q9UF72 201 aa14.2□□□□□ -0.14
SNRPA1-205ENST00000558036 ANKRD39Q53RE8 183 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms